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ONTOLOGY REPORT - ANNOTATIONS


Term:primary systemic mycosis
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Accession:DOID:0050292 term browser browse the term
Definition:A systemic mycosis that results_in infection located_in human body, has_material_basis_in Fungi, which can overcome the physiological and cellular defenses of the normal human host. The primary deep pathogens usually gain access to the host via the respiratory tract.
Synonyms:primary_id: RDO:9002531
For additional species annotation, visit the Alliance of Genome Resources.


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coccidioidomycosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mbl2 mannose binding lectin 2 JBrowse link 1 248,435,069 248,442,669 RGD:4889458
histoplasmosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il17a interleukin 17A JBrowse link 9 26,841,299 26,844,786 RGD:9068939
G RT1-CE13 RT1 class I, locus CE13 RGD:7364917
paracoccidioidomycosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:4892087
G Cd28 Cd28 molecule JBrowse link 9 67,546,408 67,573,858 RGD:5131616
G Cfb complement factor B JBrowse link 20 4,536,206 4,542,073 RGD:7421526
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:8547589
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:8657058
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:8657058
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:5147631
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:7401182
sporotrichosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:7794681

Term paths to the root
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Term Annotations click to browse term
  disease 15503
    disease by infectious agent 832
      Bacterial Infections and Mycoses 576
        fungal infectious disease 72
          systemic mycosis 66
            primary systemic mycosis 12
              adiaspiromycosis 0
              allescheriosis 0
              blastomycosis 0
              coccidioidomycosis 1
              histoplasmosis + 2
              paracoccidioidomycosis + 8
              phaeohyphomycosis + 0
              sporotrichosis 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.