ONTOLOGY REPORT - ANNOTATIONS


Term:AGAT deficiency
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Accession:DOID:0050712 term browser browse the term
Definition:An amino acid metabolic disorder that has_material_basis_in a mutation in the GATM gene resulting in deficiency of arginine:glycine amidinotransferase which then limits creatine synthesis. (DO)
Synonyms:exact_synonym: Arginine:Glycine Amidinotransferase Deficiency;   CCDS3;   Creatine Deficiency Syndrome due to AGAT Deficiency;   GATM deficiency;   L-Arginine:Glycine Aminidotransferase Deficiency;   cerebral creatine deficiency syndrome 3
 primary_id: MESH:C567192
 alt_id: OMIM:612718;   RDO:0015333
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AGAT deficiency term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Duox1 dual oxidase 1 JBrowse link 3 114,251,794 114,286,827 RGD:8554872
G Duox2 dual oxidase 2 JBrowse link 3 114,218,187 114,237,808 RGD:8554872
G Duoxa1 dual oxidase maturation factor 1 JBrowse link 3 114,241,057 114,251,720 RGD:8554872
G Duoxa2 dual oxidase maturation factor 2 JBrowse link 3 114,236,718 114,240,086 RGD:8554872
G Gatm glycine amidinotransferase JBrowse link 3 114,711,570 114,728,155 RGD:7240710
RGD:8554872
G Shf Src homology 2 domain containing F JBrowse link 3 114,288,021 114,307,334 RGD:8554872
G Slc28a2 solute carrier family 28 member 2 JBrowse link 3 114,355,003 114,647,382 RGD:8554872
G Sord sorbitol dehydrogenase JBrowse link 3 114,176,127 114,207,368 RGD:8554872
G Terb2 telomere repeat binding bouquet formation protein 2 JBrowse link 3 114,129,387 114,147,943 RGD:8554872

Term paths to the root
Path 1
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  disease 14875
    syndrome 4220
      cerebral creatine deficiency syndrome 12
        AGAT deficiency 9
Path 2
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  disease 14875
    disease of anatomical entity 14051
      nervous system disease 9116
        central nervous system disease 6913
          brain disease 6418
            disease of mental health 4325
              developmental disorder of mental health 2595
                specific developmental disorder 1330
                  communication disorder 214
                    language disorder 138
                      speech disorder 48
                        AGAT deficiency 9
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