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ONTOLOGY REPORT - ANNOTATIONS


Term:large intestine adenocarcinoma
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Accession:DOID:0050913 term browser browse the term
Definition:A large intestine cancer that has_material_basis_in epithelial cells of glandular origin. (DO)
Synonyms:primary_id: RDO:9001839
For additional species annotation, visit the Alliance of Genome Resources.


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colon adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa7 annexin A7 JBrowse link 15 4,254,470 4,281,296 RGD:2292654
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:1601201
RGD:8554872
G ApcPirc APC, WNT signaling pathway regulator; polyposis in the rat colon RGD:1601201
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:734633
G Csf2 colony stimulating factor 2 JBrowse link 10 39,602,089 39,604,070 RGD:10450245
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1599637
G Daxx death-domain associated protein JBrowse link 20 5,480,103 5,485,962 RGD:9587838
G Fech ferrochelatase JBrowse link 18 59,941,992 59,975,192 RGD:14700888
G Hmgb1 high mobility group box 1 JBrowse link 12 7,082,529 7,090,246 RGD:10402080
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:13210775
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:13210775
G Mgmt O-6-methylguanine-DNA methyltransferase JBrowse link 1 209,237,255 209,464,189 RGD:1599637
G Mir155 microRNA 155 JBrowse link 11 24,176,603 24,176,667 RGD:21409754
G Msh6 mutS homolog 6 JBrowse link 6 11,644,565 11,662,389 RGD:8554872
G Pcsk5 proprotein convertase subtilisin/kexin type 5 JBrowse link 1 236,031,988 236,313,858 RGD:11556207
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:5685670
G Pik3r3 phosphoinositide-3-kinase regulatory subunit 3 JBrowse link 5 135,069,972 135,145,633 RGD:13432053
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:13432049
RGD:13432051
G Rad54l RAD54 like JBrowse link 5 134,948,511 134,978,125 RGD:8554872
G Srsf4 serine and arginine rich splicing factor 4 JBrowse link 5 150,032,999 150,060,769 RGD:11039405
G Srsf5 serine and arginine rich splicing factor 5 JBrowse link 6 104,611,026 104,640,033 RGD:11039405
G Srsf6 serine and arginine rich splicing factor 6 JBrowse link 3 159,305,345 159,310,668 RGD:11039405
G Tert telomerase reverse transcriptase JBrowse link 1 32,250,876 32,275,330 RGD:11038656
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:13432089
G Vegfc vascular endothelial growth factor C JBrowse link 16 40,440,371 40,555,178 RGD:2315488
rectum adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:8554872
Somatic Colonic Adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rad54l RAD54 like JBrowse link 5 134,948,511 134,978,125 RGD:8554872

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15610
    disease of cellular proliferation 5827
      cancer 4161
        cell type cancer 3057
          carcinoma 1914
            adenocarcinoma 1323
              large intestine adenocarcinoma 25
                anal canal adenocarcinoma + 0
                anus adenocarcinoma + 0
                cecum adenocarcinoma 0
                colon adenocarcinoma + 25
                rectum adenocarcinoma + 1
Path 2
Term Annotations click to browse term
  disease 15610
    disease of cellular proliferation 5827
      Neoplasms by Site 5211
        Digestive System Neoplasms 1822
          Gastrointestinal Neoplasms 1682
            gastrointestinal system cancer 1172
              intestinal cancer 235
                large intestine cancer 232
                  large intestine adenocarcinoma 25
                    anal canal adenocarcinoma + 0
                    anus adenocarcinoma + 0
                    cecum adenocarcinoma 0
                    colon adenocarcinoma + 25
                    rectum adenocarcinoma + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.