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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:benign glioma
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Accession:DOID:0060101 term browser browse the term
Definition:A cell type benign neoplasm that has_material_basis_in glial cells
Synonyms:primary_id: RDO:9002431
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
 
ganglioglioma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bap1 Brca1 associated protein 1 ISO ClinVar Annotator: match by term: Ganglioglioma ClinVar PMID:25741868, PMID:28492532 NCBI chr16:7,336,685...7,345,511
Ensembl chr16:7,336,685...7,345,511
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: Childhood ganglioglioma ClinVar PMID:19363522, PMID:19794125, PMID:21190184, PMID:21343559, PMID:21716161, PMID:22535154, PMID:24033266 NCBI chr 4:67,389,331...67,520,549
Ensembl chr 4:67,396,192...67,520,356
JBrowse link
G Nf1 neurofibromin 1 ISO ClinVar Annotator: match by term: Ganglioglioma ClinVar PMID:7607663, PMID:16835897, PMID:16944272, PMID:19738042, PMID:24357598, PMID:25325900, PMID:25741868, PMID:26467025, PMID:27980226, PMID:28492532 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
subependymal giant cell astrocytoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1a calcium voltage-gated channel subunit alpha1 A ISO ClinVar Annotator: match by term: Subependymal giant-cell astrocytoma ClinVar PMID:28492532 NCBI chr19:25,453,236...25,749,550
Ensembl chr19:25,526,751...25,749,550
JBrowse link
G Tsc1 TSC complex subunit 1 ISO ClinVar Annotator: match by term: Subependymal giant-cell astrocytoma ClinVar PMID:10227394, PMID:10363127, PMID:10533067, PMID:15798777, PMID:17304050, PMID:18032745, PMID:26540169, PMID:28492532, PMID:30311386 NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16058
    disease of cellular proliferation 5918
      Neoplasms by Histologic Type 3729
        cell type benign neoplasm 784
          benign glioma 5
            benign ependymoma + 2
            ganglioglioma 3
Path 2
Term Annotations click to browse term
  disease 16058
    disease of cellular proliferation 5918
      Neoplasms by Site 5283
        Nervous System Neoplasms 1664
          Central Nervous System Neoplasms 1340
            central nervous system benign neoplasm 55
              benign glioma 5
                benign ependymoma + 2
                ganglioglioma 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.