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ONTOLOGY REPORT - ANNOTATIONS


Term:chromosome 13q14 deletion syndrome
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Accession:DOID:0060391 term browser browse the term
Definition:A chromosomal deletion syndrome that is characterized by low birth weight, dysmorphic facies, limb defects, genital malformations and psychomotor developmental delay, has_material_basis_in deletion of the long arm of chromosome 13. (DO)
Synonyms:exact_synonym: deletion 13q14
 primary_id: OMIM:613884
 alt_id: RDO:0010092
 xref: ORDO:1587
For additional species annotation, visit the Alliance of Genome Resources.


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chromosome 13q14 deletion syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ACOD1 aconitate decarboxylase 1 JBrowse link 13 76,948,511 76,958,638 RGD:8554872
G ALG11 ALG11 alpha-1,2-mannosyltransferase JBrowse link 13 52,012,398 52,033,600 RGD:8554872
G ARL11 ADP ribosylation factor like GTPase 11 JBrowse link 13 49,628,456 49,633,872 RGD:8554872
G ATP7B ATPase copper transporting beta JBrowse link 13 51,932,669 52,012,130 RGD:8554872
G ATXN8OS ATXN8 opposite strand lncRNA JBrowse link 13 70,107,213 70,139,753 RGD:8554872
G BORA BORA aurora kinase A activator JBrowse link 13 72,727,739 72,756,198 RGD:8554872
G C13orf42 chromosome 13 open reading frame 42 JBrowse link 13 51,082,119 51,172,388 RGD:8554872
G CAB39L calcium binding protein 39 like JBrowse link 13 49,308,650 49,444,851 RGD:8554872
G CCDC70 coiled-coil domain containing 70 JBrowse link 13 51,861,969 51,866,232 RGD:8554872
G CDADC1 cytidine and dCMP deaminase domain containing 1 JBrowse link 13 49,247,875 49,293,486 RGD:8554872
G CKAP2 cytoskeleton associated protein 2 JBrowse link 13 52,455,360 52,476,631 RGD:8554872
G CLN5 CLN5 intracellular trafficking protein JBrowse link 13 76,992,081 77,005,117 RGD:8554872
G CNMD chondromodulin JBrowse link 13 52,703,264 52,739,820 RGD:8554872
G COMMD6 COMM domain containing 6 JBrowse link 13 75,525,214 75,549,439 RGD:8554872
G CYSLTR2 cysteinyl leukotriene receptor 2 JBrowse link 13 48,653,929 48,711,226 RGD:8554872
G DACH1 dachshund family transcription factor 1 JBrowse link 13 71,437,966 71,868,068 RGD:8554872
G DHRS12 dehydrogenase/reductase 12 JBrowse link 13 51,767,993 51,804,163 RGD:8554872
G DIAPH3 diaphanous related formin 3 JBrowse link 13 59,665,583 60,163,985 RGD:8554872
G DIAPH3-AS1 DIAPH3 antisense RNA 1 JBrowse link 13 60,012,718 60,044,357 RGD:8554872
G DIAPH3-AS2 DIAPH3 antisense RNA 2 JBrowse link 13 60,144,698 60,153,505 RGD:8554872
G DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease JBrowse link 13 72,752,169 72,781,900 RGD:8554872
G DLEU1 deleted in lymphocytic leukemia 1 JBrowse link 13 50,082,169 50,528,643 RGD:8554872
G DLEU1-AS1 DLEU1 antisense RNA 1 JBrowse link 13 50,520,933 50,527,449 RGD:8554872
G DLEU2 deleted in lymphocytic leukemia 2 JBrowse link 13 49,982,549 50,125,541 RGD:8554872
G DLEU7 deleted in lymphocytic leukemia 7 JBrowse link 13 50,711,026 50,843,945 RGD:8554872
G DLEU7-AS1 DLEU7 antisense RNA 1 JBrowse link 13 50,807,855 50,849,905 RGD:8554872
G EBPL EBP like JBrowse link 13 49,660,674 49,691,487 RGD:8554872
G EDNRB endothelin receptor type B JBrowse link 13 77,895,481 77,975,527 RGD:8554872
G EDNRB-AS1 EDNRB antisense RNA 1 JBrowse link 13 77,818,937 77,908,442 RGD:8554872
G FAM124A family with sequence similarity 124 member A JBrowse link 13 51,222,334 51,284,241 RGD:8554872
G FBXL3 F-box and leucine rich repeat protein 3 JBrowse link 13 76,992,597 77,027,164 RGD:8554872
G FNDC3A fibronectin type III domain containing 3A JBrowse link 13 48,975,241 49,209,779 RGD:8554872
G HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1 like 2 JBrowse link 13 52,617,525 52,643,796 RGD:8554872
G INTS6 integrator complex subunit 6 JBrowse link 13 51,353,171 51,453,333 RGD:8554872
G INTS6-AS1 INTS6 antisense RNA 1 JBrowse link 13 51,453,345 51,454,716 RGD:8554872
G ITM2B integral membrane protein 2B JBrowse link 13 48,233,206 48,270,357 RGD:8554872
G KCNRG potassium channel regulator JBrowse link 13 50,015,444 50,020,922 RGD:8554872
G KCTD12 potassium channel tetramerization domain containing 12 JBrowse link 13 76,880,175 76,886,405 RGD:8554872
G KLF12 Kruppel like factor 12 JBrowse link 13 73,686,012 74,168,295 RGD:8554872
G KLF5 Kruppel like factor 5 JBrowse link 13 73,054,976 73,077,542 RGD:8554872
G KLHL1 kelch like family member 1 JBrowse link 13 69,700,593 70,108,493 RGD:8554872
G KPNA3 karyopherin subunit alpha 3 JBrowse link 13 49,699,307 49,792,682 RGD:8554872
G LINC00331 long intergenic non-protein coding RNA 331 JBrowse link 13 78,787,319 78,840,050 RGD:8554872
G LINC00333 long intergenic non-protein coding RNA 333 JBrowse link 13 84,140,602 84,606,768 RGD:8554872
G LINC00345 long intergenic non-protein coding RNA 345 JBrowse link 13 52,483,687 52,601,006 RGD:8554872
G LINC00347 long intergenic non-protein coding RNA 347 JBrowse link 13 74,552,843 74,557,120 RGD:8554872
G LINC00348 long intergenic non-protein coding RNA 348 JBrowse link 13 71,015,141 71,168,417 RGD:8554872
G LINC00351 long intergenic non-protein coding RNA 351 JBrowse link 13 85,363,603 85,544,662 RGD:8554872
G LINC00355 long intergenic non-protein coding RNA 355 JBrowse link 13 63,986,371 64,076,011 RGD:8554872
G LINC00358 long intergenic non-protein coding RNA 358 JBrowse link 13 62,003,525 62,029,548 RGD:8554872
G LINC00364 long intergenic non-protein coding RNA 364 JBrowse link 13 67,372,387 67,379,994 RGD:8554872
G LINC00374 long intergenic non-protein coding RNA 374 JBrowse link 13 58,211,697 58,233,117 RGD:8554872
G LINC00375 long intergenic non-protein coding RNA 375 JBrowse link 13 85,065,087 85,148,057 RGD:8554872
G LINC00376 long intergenic non-protein coding RNA 376 JBrowse link 13 63,183,101 63,328,094 RGD:8554872
G LINC00377 long intergenic non-protein coding RNA 377 JBrowse link 13 81,018,391 81,044,442 RGD:8554872
G LINC00378 long intergenic non-protein coding RNA 378 JBrowse link 13 60,672,955 60,695,806 RGD:8554872
G LINC00381 long intergenic non-protein coding RNA 381 JBrowse link 13 74,419,173 74,435,159 RGD:8554872
G LINC00382 long intergenic non-protein coding RNA 382 JBrowse link 13 79,872,586 79,918,036 RGD:8554872
G LINC00383 long intergenic non-protein coding RNA 383 JBrowse link 13 69,222,346 69,322,101 RGD:8554872
G LINC00392 long intergenic non-protein coding RNA 392 JBrowse link 13 73,564,244 73,587,879 RGD:8554872
G LINC00393 long intergenic non-protein coding RNA 393 JBrowse link 13 73,546,687 73,670,457 RGD:8554872
G LINC00395 long intergenic non-protein coding RNA 395 JBrowse link 13 63,667,682 63,738,018 RGD:8554872
G LINC00402 long intergenic non-protein coding RNA 402 JBrowse link 13 74,231,444 74,259,976 RGD:8554872
G LINC00430 long intergenic non-protein coding RNA 430 JBrowse link 13 86,909,601 86,936,807 RGD:8554872
G LINC00434 long intergenic non-protein coding RNA 434 JBrowse link 13 60,214,347 60,268,104 RGD:8554872
G LINC00444 long intergenic non-protein coding RNA 444 JBrowse link 13 47,903,806 47,935,824 RGD:8554872
G LINC00446 long intergenic non-protein coding RNA 446 JBrowse link 13 78,012,883 78,053,595 RGD:8554872
G LINC00448 long intergenic non-protein coding RNA 448 JBrowse link 13 62,672,285 62,807,359 RGD:8554872
G LINC00458 long intergenic non-protein coding RNA 458 JBrowse link 13 54,124,324 54,132,871 RGD:8554872
G LINC00459 long intergenic non-protein coding RNA 459 JBrowse link 13 62,323,657 62,328,847 RGD:8554872
G LINC00462 long intergenic non-protein coding RNA 462 JBrowse link 13 48,576,974 48,580,901 RGD:8554872
G LINC00550 long intergenic non-protein coding RNA 550 JBrowse link 13 68,861,284 68,885,325 RGD:8554872
G LINC00558 long intergenic non-protein coding RNA 558 JBrowse link 13 53,815,419 53,876,119 RGD:8554872
G LINC00561 long intergenic non-protein coding RNA 561 JBrowse link 13 75,932,398 75,935,132 RGD:8554872
G LINC00562 long intergenic non-protein coding RNA 562 JBrowse link 13 47,930,153 47,932,622 RGD:8554872
G LINC00564 long intergenic non-protein coding RNA 564 JBrowse link 13 81,225,865 81,226,983 RGD:8554872
G LINC01038 long intergenic non-protein coding RNA 1038 JBrowse link 13 79,804,386 79,805,682 RGD:8554872
G LINC01052 long intergenic non-protein coding RNA 1052 JBrowse link 13 65,866,047 65,878,219 RGD:8554872
G LINC01065 long intergenic non-protein coding RNA 1065 JBrowse link 13 53,131,746 53,151,900 RGD:8554872
G LINC01068 long intergenic non-protein coding RNA 1068 JBrowse link 13 79,566,727 79,571,446 RGD:8554872
G LINC01069 long intergenic non-protein coding RNA 1069 JBrowse link 13 77,979,766 77,994,773 RGD:8554872
G LINC01074 long intergenic non-protein coding RNA 1074 JBrowse link 13 62,321,305 62,322,398 RGD:8554872
G LINC01075 long intergenic non-protein coding RNA 1075 JBrowse link 13 62,212,282 62,249,951 RGD:8554872
G LINC01078 long intergenic non-protein coding RNA 1078 JBrowse link 13 75,240,588 75,252,012 RGD:8554872
G LINC01080 long intergenic non-protein coding RNA 1080 JBrowse link 13 80,011,077 80,026,663 RGD:8554872
G LINC01442 long intergenic non-protein coding RNA 1442 JBrowse link 13 60,789,787 60,941,768 RGD:8554872
G LINC02333 long intergenic non-protein coding RNA 2333 JBrowse link 13 52,334,295 52,341,883 RGD:8554872
G LINC02338 long intergenic non-protein coding RNA 2338 JBrowse link 13 58,165,827 58,209,483 RGD:8554872
G LINC02339 long intergenic non-protein coding RNA 2339 JBrowse link 13 61,424,689 61,427,946 RGD:8554872
G LMO7 LIM domain 7 JBrowse link 13 75,620,434 75,859,870 RGD:8554872
G LMO7-AS1 LMO7 antisense RNA 1 JBrowse link 13 75,604,700 75,635,994 RGD:8554872
G LMO7DN LMO7 downstream neighbor JBrowse link 13 75,871,038 75,883,813 RGD:8554872
G LMO7DN-IT1 LMO7DN intronic transcript 1 JBrowse link 13 75,876,886 75,881,127 RGD:8554872
G LPAR6 lysophosphatidic acid receptor 6 JBrowse link 13 48,400,897 48,444,669 RGD:8554872
G MED4 mediator complex subunit 4 JBrowse link 13 48,075,724 48,095,141 RGD:8554872
G MED4-AS1 MED4 antisense RNA 1 JBrowse link 13 48,077,137 48,079,993 RGD:8554872
G MIR1297 microRNA 1297 JBrowse link 13 54,311,972 54,312,048 RGD:8554872
G MIR15A microRNA 15a JBrowse link 13 50,049,119 50,049,201 RGD:8554872
G MIR16-1 microRNA 16-1 JBrowse link 13 50,048,973 50,049,061 RGD:8554872
G MIR3169 microRNA 3169 JBrowse link 13 61,199,798 61,199,880 RGD:8554872
G MIR3613 microRNA 3613 JBrowse link 13 49,996,415 49,996,501 RGD:8554872
G MIR3665 microRNA 3665 JBrowse link 13 77,698,012 77,698,116 RGD:8554872
G MIR4703 microRNA 4703 JBrowse link 13 51,552,589 51,552,667 RGD:8554872
G MIR4704 microRNA 4704 JBrowse link 13 66,218,250 66,218,324 RGD:8554872
G MIR5007 microRNA 5007 JBrowse link 13 55,174,454 55,174,548 RGD:8554872
G MIR548X2 microRNA 548x-2 JBrowse link 13 65,966,330 65,966,429 RGD:8554872
G MIR5693 microRNA 5693 JBrowse link 13 51,348,567 51,348,639 RGD:8554872
G MIR759 microRNA 759 JBrowse link 13 52,810,050 52,810,140 RGD:8554872
G MLNR motilin receptor JBrowse link 13 49,220,338 49,222,377 RGD:8554872
G MYCBP2 MYC binding protein 2 JBrowse link 13 77,044,657 77,327,098 RGD:8554872
G MYCBP2-AS1 MYCBP2 antisense RNA 1 JBrowse link 13 77,075,514 77,087,776 RGD:8554872
G MZT1 mitotic spindle organizing protein 1 JBrowse link 13 72,708,367 72,727,629 RGD:8554872
G NDFIP2 Nedd4 family interacting protein 2 JBrowse link 13 79,480,722 79,556,077 RGD:8554872
G NDFIP2-AS1 NDFIP2 antisense RNA 1 JBrowse link 13 79,477,364 79,481,231 RGD:8554872
G NEK3 NIMA related kinase 3 JBrowse link 13 52,132,643 52,159,597 RGD:8554872
G NEK5 NIMA related kinase 5 JBrowse link 13 52,033,611 52,129,073 RGD:8554872
G NUDT15 nudix hydrolase 15 JBrowse link 13 48,037,567 48,052,742 RGD:8554872
G OBI1 ORC ubiquitin ligase 1 JBrowse link 13 78,614,286 78,659,165 RGD:8554872
G OBI1-AS1 OBI1 antisense RNA 1 JBrowse link 13 78,054,855 78,617,325 RGD:8554872
G OLFM4 olfactomedin 4 JBrowse link 13 53,028,813 53,052,057 RGD:8554872
G PCDH17 protocadherin 17 JBrowse link 13 57,630,104 57,729,311 RGD:8554872
G PCDH20 protocadherin 20 JBrowse link 13 61,409,685 61,415,522 RGD:8554872
G PCDH8 protocadherin 8 JBrowse link 13 52,842,889 52,848,640 RGD:8554872
G PCDH9 protocadherin 9 JBrowse link 13 66,302,834 67,230,336 RGD:8554872
G PCDH9-AS2 PCDH9 antisense RNA 2 JBrowse link 13 66,825,169 66,915,031 RGD:8554872
G PCDH9-AS3 PCDH9 antisense RNA 3 JBrowse link 13 66,977,389 66,985,776 RGD:8554872
G PCDH9-AS4 PCDH9 antisense RNA 4 JBrowse link 13 66,990,886 67,002,000 RGD:8554872
G PHF11 PHD finger protein 11 JBrowse link 13 49,495,953 49,528,992 RGD:8554872
G PIBF1 progesterone immunomodulatory binding factor 1 JBrowse link 13 72,782,133 73,016,461 RGD:8554872
G POU4F1 POU class 4 homeobox 1 JBrowse link 13 78,598,362 78,603,552 RGD:8554872
G PRR20A proline rich 20A JBrowse link 13 57,140,918 57,143,939 RGD:8554872
G PRR20B proline rich 20B JBrowse link 13 57,147,488 57,150,509 RGD:8554872
G PRR20C proline rich 20C JBrowse link 13 57,154,061 57,157,082 RGD:8554872
G PRR20D proline rich 20D JBrowse link 13 57,160,632 57,163,653 RGD:8554872
G PRR20E proline rich 20E JBrowse link 13 57,167,197 57,170,218 RGD:8554872
G RB1 RB transcriptional corepressor 1 JBrowse link 13 48,303,747 48,481,890 RGD:8554872
G RB1-DT RB1 divergent transcript JBrowse link 13 48,296,513 48,303,702 RGD:8554872
G RBM26 RNA binding motif protein 26 JBrowse link 13 79,311,827 79,406,255 RGD:8554872
G RBM26-AS1 RBM26 antisense RNA 1 JBrowse link 13 79,406,309 79,424,336 RGD:8554872
G RCBTB1 RCC1 and BTB domain containing protein 1 JBrowse link 13 49,531,944 49,585,587 RGD:8554872
G RCBTB2 RCC1 and BTB domain containing protein 2 JBrowse link 13 48,488,963 48,535,997 RGD:8554872
G RNASEH2B ribonuclease H2 subunit B JBrowse link 13 50,909,678 50,970,462 RGD:8554872
G RNASEH2B-AS1 RNASEH2B antisense RNA 1 JBrowse link 13 50,882,378 50,910,712 RGD:8554872
G SCEL sciellin JBrowse link 13 77,535,674 77,645,263 RGD:8554872
G SCEL-AS1 SCEL antisense RNA 1 JBrowse link 13 77,599,755 77,606,551 RGD:8554872
G SERPINE3 serpin family E member 3 JBrowse link 13 51,335,804 51,365,454 RGD:8554872
G SETDB2 SET domain bifurcated histone lysine methyltransferase 2 JBrowse link 13 49,444,274 49,495,003 RGD:8554872
G SLAIN1 SLAIN motif family member 1 JBrowse link 13 77,697,674 77,764,242 RGD:8554872
G SLITRK1 SLIT and NTRK like family member 1 JBrowse link 13 83,877,205 83,882,474 RGD:8554872
G SLITRK6 SLIT and NTRK like family member 6 JBrowse link 13 85,792,790 85,799,419 RGD:8554872
G SNORA107 small nucleolar RNA, H/ACA box 107 JBrowse link 13 84,783,654 84,783,778 RGD:8554872
G SPRY2 sprouty RTK signaling antagonist 2 JBrowse link 13 80,335,976 80,341,126 RGD:8554872
G SPRYD7 SPRY domain containing 7 JBrowse link 13 49,912,702 49,936,501 RGD:8554872
G SUCLA2 succinate-CoA ligase ADP-forming subunit beta JBrowse link 13 47,942,656 48,001,326 RGD:8554872
G SUCLA2-AS1 SUCLA2 antisense RNA 1 JBrowse link 13 48,001,389 48,002,614 RGD:8554872
G SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone JBrowse link 13 52,652,703 52,700,909 RGD:8554872
G TBC1D4 TBC1 domain family member 4 JBrowse link 13 75,283,503 75,483,144 RGD:8554872
G TDRD3 tudor domain containing 3 JBrowse link 13 60,396,457 60,573,879 RGD:8554872
G THSD1 thrombospondin type 1 domain containing 1 JBrowse link 13 52,377,167 52,406,172 RGD:8554872
G TMEM272 transmembrane protein 272 JBrowse link 13 51,813,347 51,845,177 RGD:8554872
G TRIM13 tripartite motif containing 13 JBrowse link 13 49,997,042 50,018,467 RGD:8554872
G UCHL3 ubiquitin C-terminal hydrolase L3 JBrowse link 13 75,549,480 75,606,020 RGD:8554872
G UTP14C UTP14C small subunit processome component JBrowse link 13 52,024,691 52,033,600 RGD:8554872
G VPS36 vacuolar protein sorting 36 homolog JBrowse link 13 52,412,602 52,450,634 RGD:8554872
G WDFY2 WD repeat and FYVE domain containing 2 JBrowse link 13 51,584,194 51,767,709 RGD:8554872

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16491
    syndrome 5720
      chromosomal deletion syndrome 643
        chromosome 13q14 deletion syndrome 165
Path 2
Term Annotations click to browse term
  disease 16491
    disease of cellular proliferation 6558
      cancer 4408
        organ system cancer 4229
          nervous system cancer 1907
            central nervous system cancer 1442
              brain cancer 1431
                supratentorial cancer 1173
                  cerebrum cancer 1144
                    astrocytoma 1142
                      astroblastoma 329
                        retinoblastoma 187
                          chromosome 13q14 deletion syndrome 165
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.