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ONTOLOGY REPORT - ANNOTATIONS


Term:colorectal carcinoma
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Accession:DOID:0080199 term browser browse the term
Definition:A colorectal cancer that arises from the colon or rectum and invades through the muscularis mucosa into the submucosa. (DO)
Synonyms:exact_synonym: colorectal carcinomas
 xref: NCI:C2955
For additional species annotation, visit the Alliance of Genome Resources.


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colorectal carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actr2 actin related protein 2 JBrowse link 14 104,338,486 104,375,840 RGD:11570560
G Actr3 actin related protein 3 JBrowse link 13 41,695,520 41,738,622 RGD:11570560
G Ager advanced glycosylation end product-specific receptor JBrowse link 20 4,363,152 4,366,079 RGD:7245559
G Akap12 A-kinase anchoring protein 12 JBrowse link 1 40,816,130 40,906,582 RGD:14348959
G Antxr1 ANTXR cell adhesion molecule 1 JBrowse link 4 118,946,267 119,131,202 RGD:9684940
G Bmi1 BMI1 proto-oncogene, polycomb ring finger JBrowse link 17 85,360,439 85,370,283 RGD:1580058
G Brd7 bromodomain containing 7 JBrowse link 19 19,672,780 19,701,484 RGD:9586444
G Calu calumenin JBrowse link 4 56,625,611 56,653,112 RGD:2316232
G Cbx7 chromobox 7 JBrowse link 7 121,136,067 121,153,503 RGD:9587355
G Cd59 CD59 molecule JBrowse link 3 94,010,481 94,028,660 RGD:1600485
G Chi3l1 chitinase 3 like 1 JBrowse link 13 51,022,844 51,030,797 RGD:4892637
G Hnrnpm heterogeneous nuclear ribonucleoprotein M JBrowse link 7 18,516,253 18,554,536 RGD:10054273
G Itgb3 integrin subunit beta 3 JBrowse link 10 92,667,869 92,783,413 RGD:5112894
G Mbd4 methyl-CpG binding domain 4 DNA glycosylase JBrowse link 4 147,744,673 147,756,462 RGD:9588975
G Msh3 mutS homolog 3 JBrowse link 2 21,790,048 21,931,791 RGD:1625103
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:14402406
G Psmb9 proteasome subunit beta 9 JBrowse link 20 3,973,424 3,978,845 RGD:6483362
G Strap serine/threonine kinase receptor associated protein JBrowse link 4 171,730,629 171,744,877 RGD:1581429
colon adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa7 annexin A7 JBrowse link 15 4,254,470 4,281,296 RGD:2292654
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:1601201
RGD:8554872
G ApcPirc APC, WNT signaling pathway regulator; polyposis in the rat colon RGD:1601201
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:734633
G Csf2 colony stimulating factor 2 JBrowse link 10 39,602,089 39,604,070 RGD:10450245
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:1599637
G Daxx death-domain associated protein JBrowse link 20 5,480,103 5,485,962 RGD:9587838
G Hmgb1 high mobility group box 1 JBrowse link 12 7,082,529 7,090,246 RGD:10402080
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:13210775
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:13210775
G Mgmt O-6-methylguanine-DNA methyltransferase JBrowse link 1 209,237,255 209,464,189 RGD:1599637
G Msh6 mutS homolog 6 JBrowse link 6 11,644,565 11,662,389 RGD:8554872
G Pcsk5 proprotein convertase subtilisin/kexin type 5 JBrowse link 1 236,031,988 236,313,858 RGD:11556207
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:5685670
G Pik3r3 phosphoinositide-3-kinase regulatory subunit 3 JBrowse link 5 135,069,972 135,145,633 RGD:13432053
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:13432049
RGD:13432051
G Rad54l RAD54 like JBrowse link 5 134,948,511 134,978,125 RGD:8554872
G Srsf4 serine and arginine rich splicing factor 4 JBrowse link 5 150,032,999 150,060,769 RGD:11039405
G Srsf5 serine and arginine rich splicing factor 5 JBrowse link 6 104,611,026 104,640,033 RGD:11039405
G Srsf6 serine and arginine rich splicing factor 6 JBrowse link 3 159,305,345 159,310,668 RGD:11039405
G Tert telomerase reverse transcriptase JBrowse link 1 32,250,876 32,275,330 RGD:11038656
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:13432089
G Vegfc vascular endothelial growth factor C JBrowse link 16 40,440,371 40,555,178 RGD:2315488
colorectal adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb1a ATP binding cassette subfamily B member 1A JBrowse link 4 22,339,829 22,517,642 RGD:2312343
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B JBrowse link 4 22,225,123 22,307,577 RGD:1598563
G Arpc2 actin related protein 2/3 complex, subunit 2 JBrowse link 9 81,518,163 81,548,871 RGD:11049173
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:11353854
G Bcl2l2 Bcl2-like 2 JBrowse link 15 33,543,774 33,549,165 RGD:14394422
G Birc7 baculoviral IAP repeat-containing 7 JBrowse link 3 176,438,335 176,443,864 RGD:13217408
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:11567230
G Brd8 bromodomain containing 8 JBrowse link 18 27,375,645 27,423,989 RGD:9587763
G Cd44 CD44 molecule (Indian blood group) JBrowse link 3 92,695,083 92,783,820 RGD:2289356
G Dnmt3b DNA methyltransferase 3 beta JBrowse link 3 149,131,541 149,170,061 RGD:9589082
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:13210753
G Gata6 GATA binding protein 6 JBrowse link 18 2,415,821 2,447,087 RGD:13208874
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:13210767
G Hpca hippocalcin JBrowse link 5 147,295,124 147,305,757 RGD:9693683
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:13210753
G Kcnh1 potassium voltage-gated channel subfamily H member 1 JBrowse link 13 110,920,712 111,232,291 RGD:9693694
G Kmt2b lysine methyltransferase 2B JBrowse link 1 89,022,889 89,042,176 RGD:9588601
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:13210782
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:13210782
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 16 9,620,854 9,709,342 RGD:13217408
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase JBrowse link 4 147,532,040 147,592,769 RGD:13217408
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:13210753
G Tyms thymidylate synthetase JBrowse link 9 121,918,875 121,931,564 RGD:2317418
G Utp23 UTP23, small subunit processome component JBrowse link 7 91,384,329 91,389,605 RGD:11041896
rectum adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:8554872
Somatic Colonic Adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rad54l RAD54 like JBrowse link 5 134,948,511 134,978,125 RGD:8554872

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15036
    disease of cellular proliferation 5653
      Neoplasms by Histologic Type 3516
        Glandular and Epithelial Neoplasms 2774
          carcinoma 1857
            colorectal carcinoma 62
              colorectal adenocarcinoma + 45
Path 2
Term Annotations click to browse term
  disease 15036
    disease of anatomical entity 14171
      gastrointestinal system disease 4287
        Gastrointestinal Diseases 2376
          intestinal disease 1326
            Intestinal Neoplasms 650
              intestinal cancer 215
                large intestine cancer 212
                  colorectal cancer 212
                    colorectal carcinoma 62
                      colorectal adenocarcinoma + 45
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.