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ONTOLOGY REPORT - ANNOTATIONS


Term:CAKUT
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Accession:DOID:0080205 term browser browse the term
Definition:A urinary system disease characterized by structural malformations in the kidney and/or urinary tract containing vesicoureteral reflux. (DO)
Synonyms:exact_synonym: congenital anomalies of kidney and urinary tract;   congenital anomalies of the kidney and urinary tract;   renal or urinary tract malformation
 primary_id: MESH:C566906
 xref: OMIM:PS610805;   ORDO:93545
For additional species annotation, visit the Alliance of Genome Resources.


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CAKUT term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 15 20,776,060 20,791,013 RGD:13442498
G Bmp7 bone morphogenetic protein 7 JBrowse link 3 170,879,972 170,955,820 RGD:8554872
G Cdc5l cell division cycle 5-like JBrowse link 9 17,949,764 17,988,514 RGD:8554872
G Chd1l chromodomain helicase DNA binding protein 1-like JBrowse link 2 199,714,044 199,792,270 RGD:8554872
G Emc1 ER membrane protein complex subunit 1 JBrowse link 5 157,820,908 157,846,226 RGD:8554872
G Hspa1b heat shock protein family A (Hsp70) member 1B JBrowse link 20 4,877,638 4,880,112 RGD:7242732
G Lifr LIF receptor subunit alpha JBrowse link 2 56,424,910 56,489,346 RGD:8554872
RGD:13592920
G Nrip1 nuclear receptor interacting protein 1 JBrowse link 11 14,658,225 14,742,478 RGD:8554872
G Ret ret proto-oncogene JBrowse link 4 150,202,170 150,249,196 RGD:8554872
G Six2 SIX homeobox 2 JBrowse link 6 8,952,572 8,955,893 RGD:8554872
G Slit2 slit guidance ligand 2 JBrowse link 14 66,831,848 67,171,491 RGD:8554872
G Srgap1 SLIT-ROBO Rho GTPase activating protein 1 JBrowse link 7 63,968,915 64,251,449 RGD:8554872
G Tbx6 T-box transcription factor 6 JBrowse link 1 198,214,797 198,218,706 RGD:11554173
BLADDER DYSFUNCTION, AUTONOMIC, WITH IMPAIRED PUPILLARY REFLEX AND SECONDARY CAKUT term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit JBrowse link 8 59,594,007 59,607,122 RGD:8554872
RGD:7240710
CAKUT1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dstyk dual serine/threonine and tyrosine protein kinase JBrowse link 13 49,195,325 49,243,327 RGD:7240710
RGD:8554872
G Upk3a uroplakin 3A JBrowse link 7 125,920,357 125,925,430 RGD:8554872
CAKUT2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmp4 bone morphogenetic protein 4 JBrowse link 15 20,776,060 20,791,013 RGD:13446406
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:13204792
G Tbx18 T-box transcription factor 18 JBrowse link 8 95,359,354 95,387,363 RGD:8554872
RGD:7240710
G Timp1 TIMP metallopeptidase inhibitor 1 JBrowse link X 1,364,771 1,369,451 RGD:13204792
CAKUT3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nrip1 nuclear receptor interacting protein 1 JBrowse link 11 14,658,225 14,742,478 RGD:8554872
RGD:7240710
renal coloboma syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pax2 paired box 2 JBrowse link 1 264,493,579 264,585,073 RGD:7240710
RGD:8554872

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16017
    disease of anatomical entity 15271
      Urogenital Diseases 4029
        urinary system disease 2022
          CAKUT 20
            BLADDER DYSFUNCTION, AUTONOMIC, WITH IMPAIRED PUPILLARY REFLEX AND SECONDARY CAKUT 1
            CAKUT1 2
            CAKUT2 4
            CAKUT3 1
            renal coloboma syndrome 1
Path 2
Term Annotations click to browse term
  disease 16017
    disease of anatomical entity 15271
      Urogenital Diseases 4029
        urinary system disease 2022
          ureteral disease 134
            vesicoureteral reflux 34
              CAKUT 20
                BLADDER DYSFUNCTION, AUTONOMIC, WITH IMPAIRED PUPILLARY REFLEX AND SECONDARY CAKUT 1
                CAKUT1 2
                CAKUT2 4
                CAKUT3 1
                renal coloboma syndrome 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.