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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:hereditary spastic paraplegia 31
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Accession:DOID:0110782 term browser browse the term
Definition:A hereditary spastic paraplegia that has_material_basis_in mutation in the REEP1 gene on chromosome 2p11. (DO)
Synonyms:exact_synonym: SPG31;   autosomal dominant spastic paraplegia 31;   autosomal dominant spastic paraplegia type 31
 primary_id: MESH:C565210
 alt_id: OMIM:610250;   RDO:0011967
 xref: GARD:10817;   ORDO:101011
For additional species annotation, visit the Alliance of Genome Resources.


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hereditary spastic paraplegia 31 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Reep1 receptor accessory protein 1 ISO ClinVar Annotator: match by OMIM:610250
ClinVar Annotator: match by term: Spastic paraplegia 31, autosomal dominant
OMIM
ClinVar
PMID:16826527, PMID:18321925, PMID:18644145, PMID:19034539, PMID:20718791, PMID:22703882, PMID:23108492, PMID:23400676, PMID:23812641, PMID:24451228, PMID:24478229, PMID:25025039, PMID:25525159, PMID:25741868, PMID:26201691, PMID:26467025, PMID:26671083, PMID:28362824, PMID:28492532, PMID:29629531, PMID:30373780, PMID:32581362 NCBI chr 4:99,618,622...99,735,329
Ensembl chr 4:99,618,622...99,735,319
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16045
    disease of anatomical entity 15292
      nervous system disease 10879
        central nervous system disease 9020
          paraplegia 163
            hereditary spastic paraplegia 147
              hereditary spastic paraplegia 31 1
Path 2
Term Annotations click to browse term
  disease 16045
    disease of anatomical entity 15292
      nervous system disease 10879
        central nervous system disease 9020
          neurodegenerative disease 3190
            Nervous System Heredodegenerative Disorders 1950
              motor peripheral neuropathy 536
                hereditary spastic paraplegia 147
                  hereditary spastic paraplegia 31 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.