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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:familial chylomicronemia syndrome
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Accession:DOID:0111417 term browser browse the term
Definition:A familial hyperlipidemia characterized by hypertriglyceridemia and fasting chylomicronemia. (DO)
Synonyms:xref: ORDO:444490
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
 
familial apolipoprotein A5 deficiency term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA5 apolipoprotein A5 ISO OMIM NCBI chr 5:16,774,117...16,777,535
Ensembl chr 5:16,774,501...16,777,768
JBrowse link
familial apolipoprotein C-II deficiency term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOC2 apolipoprotein C2 ISO OMIM NCBI chr 1:110,504,806...110,506,986
Ensembl chr 1:110,504,815...110,506,961
JBrowse link
familial GPIHBP1 deficiency term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPIHBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 ISO OMIM NCBI chr13:37,005,499...37,007,214
Ensembl chr13:37,005,512...37,007,074
JBrowse link
Familial Hyperchylomicronemia Syndrome term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LPL lipoprotein lipase ISO ClinVar Annotator: match by term: Hyperlipoproteinemia type 1 ClinVar PMID:1562620, PMID:1576758, PMID:1598907, PMID:1731801, PMID:1737848, PMID:1907278, PMID:10735636, PMID:16174715, PMID:23246289, PMID:25741868, PMID:30311386 NCBI chr25:37,078,306...37,102,729
Ensembl chr25:37,079,756...37,102,700
JBrowse link
familial lipase maturation factor 1 deficiency term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LMF1 lipase maturation factor 1 ISO OMIM NCBI chr 6:39,682,229...39,768,311
Ensembl chr 6:39,696,442...39,762,709
JBrowse link
familial lipoprotein lipase deficiency term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA5 apolipoprotein A5 ISO ClinVar Annotator: match by term: Hyperlipoproteinemia, type I ClinVar PMID:25741868 NCBI chr 5:16,774,117...16,777,535
Ensembl chr 5:16,774,501...16,777,768
JBrowse link
G APOC2 apolipoprotein C2 ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: C-II ANAPOLIPOPROTEINEMIA
ClinVar Annotator: match by term: HYPERLIPOPROTEINEMIA, TYPE IB
CTD
ClinVar
PMID:213719, PMID:1349286, PMID:1628605, PMID:1782747, PMID:1971748, PMID:2477392, PMID:2592354, PMID:3192518, PMID:3225819, PMID:3263393, PMID:3467353, PMID:3680515, PMID:3944267, PMID:3944271, PMID:7815420, PMID:7923858, PMID:8323539, PMID:8490626, PMID:12783430, PMID:25741868, PMID:28492532 NCBI chr 1:110,504,806...110,506,986
Ensembl chr 1:110,504,815...110,506,961
JBrowse link
G LPL lipoprotein lipase ISO OMIM NCBI chr25:37,078,306...37,102,729
Ensembl chr25:37,079,756...37,102,700
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 12699
    Nutritional and Metabolic Diseases 3685
      disease of metabolism 3685
        lipid metabolism disorder 730
          familial hyperlipidemia 164
            familial chylomicronemia syndrome 5
              familial GPIHBP1 deficiency 1
              familial apolipoprotein A5 deficiency 1
              familial apolipoprotein C-II deficiency 1
              familial chylomicronemia due to inhibition of lipoprotein lipase activity 0
              familial lipase maturation factor 1 deficiency 1
              familial lipoprotein lipase deficiency + 4
Path 2
Term Annotations click to browse term
  disease 12699
    Developmental Diseases 8992
      Congenital, Hereditary, and Neonatal Diseases and Abnormalities 7841
        genetic disease 7381
          inherited metabolic disorder 2007
            lipid metabolism disorder 730
              Dyslipidemias 184
                familial hyperlipidemia 164
                  familial chylomicronemia syndrome 5
                    familial GPIHBP1 deficiency 1
                    familial apolipoprotein A5 deficiency 1
                    familial apolipoprotein C-II deficiency 1
                    familial chylomicronemia due to inhibition of lipoprotein lipase activity 0
                    familial lipase maturation factor 1 deficiency 1
                    familial lipoprotein lipase deficiency + 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.