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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:duodenum cancer
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Accession:DOID:10021 term browser browse the term
Definition:A small intestine cancer that is located_in the beginning section of the small intestine. (DO)
Synonyms:exact_synonym: cancer of duodenum;   duodenal cancer
 primary_id: RDO:9004552
 xref: ICD10CM:C17.0;   ICD9CM:152.0;   NCI:C4803;   NCI:C9328
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
 
duodenal gastrinoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Men1 menin 1 ISO associated with Neuroendocrine Tumors; DNA:loss of heterozygosity: : RGD PMID:17135306 RGD:2317341 NCBI chr 1:221,704,394...221,710,343
Ensembl chr 1:221,704,493...221,710,331
JBrowse link
duodenum adenocarcinoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Duodenal adenocarcinoma ClinVar PMID:24033266, PMID:25741868, PMID:26530882, PMID:28195569, PMID:28492532, PMID:30111351, PMID:30833958 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16023
    disease of anatomical entity 15278
      gastrointestinal system disease 4632
        intestinal disease 1514
          duodenum disease 89
            Duodenal Neoplasms 2
              duodenum cancer 2
                ampulla of Vater cancer + 0
                duodenal gastrinoma 1
                duodenal somatostatinoma 0
                duodenum adenocarcinoma + 1
Path 2
Term Annotations click to browse term
  disease 16023
    disease of anatomical entity 15278
      gastrointestinal system disease 4632
        Gastrointestinal Diseases 2552
          Gastrointestinal Neoplasms 1771
            Intestinal Neoplasms 689
              intestinal cancer 246
                small intestine cancer 6
                  duodenum cancer 2
                    ampulla of Vater cancer + 0
                    duodenal gastrinoma 1
                    duodenal somatostatinoma 0
                    duodenum adenocarcinoma + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.