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ONTOLOGY REPORT - ANNOTATIONS


Term:stomach cancer
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Accession:DOID:10534 term browser browse the term
Definition:A gastrointestinal system cancer that is located_in the stomach. (DO)
Synonyms:exact_synonym: Ca body - stomach;   Ca lesser curvature - stomach;   GASTRIC CANCER, HEREDITARY DIFFUSE;   Gastric Cancer, Familial Diffuse;   ca greater curvature of stomach;   cancer of stomach;   cancer of the stomach;   gastric cancer;   gastric cancers;   malignant neoplasm of body of stomach;   malignant neoplasm of lesser curve of stomach;   malignant tumor of body of stomach;   malignant tumor of greater curve of stomach;   malignant tumor of lesser curve of stomach;   stomach cancers
 narrow_synonym: GASTRIC CANCER, FAMILIAL DIFFUSE BREAST CANCER, LOBULAR;   GASTRIC CANCER, FAMILIAL DIFFUSE, AND CLEFT LIP WITH OR WITHOUT CLEFT PALATE;   intestinal gastric cancer
 xref: GARD:7704;   ICD10CM:C16;   ICD10CM:C16.2;   ICD10CM:C16.5;   ICD10CM:C16.6;   ICD9CM:151;   ICD9CM:151.4;   ICD9CM:151.5;   ICD9CM:151.6;   NCI:C3387;   NCI:C9331
For additional species annotation, visit the Alliance of Genome Resources.


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stomach cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgrb1 adhesion G protein-coupled receptor B1 JBrowse link 7 115,766,484 115,828,514 RGD:13831357
G Akr1b1 aldo-keto reductase family 1 member B JBrowse link 4 61,706,866 61,720,959 RGD:8548675
G Anxa1 annexin A1 JBrowse link 1 237,893,983 237,910,002 RGD:7421587
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:13592920
RGD:8554872
G Arpc1b actin related protein 2/3 complex, subunit 1B JBrowse link 12 11,252,300 11,265,849 RGD:11046270
G Aspm assembly factor for spindle microtubules JBrowse link 13 56,546,021 56,591,793 RGD:13439749
G Atp4b ATPase H+/K+ transporting subunit beta JBrowse link 16 81,136,218 81,145,131 RGD:14696738
G Bambi BMP and activin membrane-bound inhibitor JBrowse link 17 56,905,419 56,909,675 RGD:14390158
G Barhl2 BarH-like homeobox 2 JBrowse link 14 4,362,717 4,367,614 RGD:14392685
G Bst2 bone marrow stromal cell antigen 2 JBrowse link 16 19,938,781 19,942,353 RGD:14398496
G Capn9 calpain 9 JBrowse link 19 57,341,938 57,378,901 RGD:734688
G Cbx7 chromobox 7 JBrowse link 7 121,136,067 121,153,503 RGD:9587358
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:8554872
RGD:13592920
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:8554872
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:14700945
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:14700909
G Dnmt3a DNA methyltransferase 3 alpha JBrowse link 6 28,205,375 28,346,052 RGD:9589068
G Eef1e1 eukaryotic translation elongation factor 1 epsilon 1 JBrowse link 17 26,785,017 26,795,723 RGD:10401218
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link 10 86,367,596 86,391,728 RGD:13592920
RGD:8554872
G Erbb3 erb-b2 receptor tyrosine kinase 3 JBrowse link 7 2,989,202 3,010,610 RGD:8554872
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 1 80,256,973 80,268,198 RGD:11252163
RGD:13207427
RGD:13207425
RGD:13207309
RGD:11340202
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit JBrowse link 1 80,293,574 80,307,334 RGD:11340202
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit JBrowse link 4 77,284,404 77,347,011 RGD:14928319
G Fanci FA complementation group I JBrowse link 1 141,116,565 141,172,997 RGD:8554872
G Fgfr2 fibroblast growth factor receptor 2 JBrowse link 1 200,590,951 200,696,946 RGD:12801419
RGD:8554872
RGD:13592920
G Gldc glycine decarboxylase JBrowse link 1 248,295,140 248,377,122 RGD:12904663
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:7488951
RGD:14700977
RGD:14700964
RGD:14700949
RGD:14700947
RGD:14700946
RGD:14700945
RGD:14700936
G Gstt1 glutathione S-transferase theta 1 JBrowse link 20 13,799,102 13,816,527 RGD:14700936
RGD:14700994
RGD:14700984
G Hdac2 histone deacetylase 2 JBrowse link 20 43,084,870 43,108,198 RGD:9590322
RGD:9590325
G Htra2 HtrA serine peptidase 2 JBrowse link 4 113,883,671 113,886,833 RGD:5688748
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:14975135
RGD:14975253
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:7401222
RGD:13592920
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:13592920
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:14975253
RGD:14975291
RGD:14975290
G Il6r interleukin 6 receptor JBrowse link 2 189,196,180 189,255,987 RGD:14975291
G Il6st interleukin 6 signal transducer JBrowse link 2 44,279,199 44,319,427 RGD:13592920
G Irf1 interferon regulatory factor 1 JBrowse link 10 39,109,530 39,116,532 RGD:13592920
RGD:8554872
G Kcna5 potassium voltage-gated channel subfamily A member 5 JBrowse link 4 159,077,195 159,079,003 RGD:9686069
G Kdm4b lysine demethylase 4B JBrowse link 9 10,656,035 10,734,127 RGD:9587739
RGD:9587753
G Kif18a kinesin family member 18A JBrowse link 3 100,366,168 100,426,867 RGD:11554202
G Klf6 Kruppel-like factor 6 JBrowse link 17 67,887,939 67,945,052 RGD:13592920
RGD:8554872
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:13592920
RGD:8554872
G Mir125a microRNA 125a JBrowse link 1 59,704,827 59,704,911 RGD:21403678
RGD:21408544
G Mir152 microRNA 152 JBrowse link 10 84,719,319 84,719,403 RGD:19165143
RGD:21066330
RGD:19165151
G Mir155 microRNA 155 JBrowse link 11 24,176,603 24,176,667 RGD:21081514
RGD:21408595
RGD:21403680
G Mir30a microRNA 30a JBrowse link 9 29,542,635 29,542,705 RGD:35673292
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:8554872
G Mutyh mutY DNA glycosylase JBrowse link 5 135,663,328 135,675,348 RGD:13592920
RGD:8554872
G Ndc80 NDC80 kinetochore complex component JBrowse link 9 119,837,857 119,871,435 RGD:28867241
G Nras NRAS proto-oncogene, GTPase JBrowse link 2 205,553,119 205,563,716 RGD:8554872
G Nuf2 NUF2 component of NDC80 kinetochore complex JBrowse link 13 87,818,456 87,847,223 RGD:28867241
RGD:28867243
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:13592920
RGD:8554872
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:1581255
G Srsf1 serine and arginine rich splicing factor 1 JBrowse link 10 75,334,200 75,341,197 RGD:11038731
G Sult1a1 sulfotransferase family 1A member 1 JBrowse link 1 198,100,586 198,104,106 RGD:1581452
G Terf1 telomeric repeat binding factor 1 JBrowse link 5 2,853,455 2,882,731 RGD:2317220
G Tff1 trefoil factor 1 JBrowse link 20 9,892,124 9,895,984 RGD:13592920
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:14995484
RGD:8554872
RGD:14995495
G Txnip thioredoxin interacting protein JBrowse link 2 198,683,168 198,686,971 RGD:1642760
gastric adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acvr1 activin A receptor type 1 JBrowse link 3 44,432,476 44,539,680 RGD:8554872
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:8554872
G Amigo2 adhesion molecule with Ig like domain 2 JBrowse link 7 138,704,124 138,707,221 RGD:13838842
G B2m beta-2 microglobulin JBrowse link 3 114,087,287 114,093,311 RGD:8554872
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:8554872
G Cd44 CD44 molecule (Indian blood group) JBrowse link 3 92,695,083 92,783,820 RGD:2289356
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:8554872
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:8554872
G Cnot9 CCR4-NOT transcription complex subunit 9 JBrowse link 9 81,783,349 81,808,815 RGD:8554872
G Crebbp CREB binding protein JBrowse link 10 11,590,994 11,721,039 RGD:8554872
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:8554872
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link 10 86,367,596 86,391,728 RGD:8554872
G Erbb3 erb-b2 receptor tyrosine kinase 3 JBrowse link 7 2,989,202 3,010,610 RGD:8554872
G Fbxw7 F-box and WD repeat domain containing 7 JBrowse link 2 184,230,191 184,309,805 RGD:8554872
G Fgfr1 Fibroblast growth factor receptor 1 JBrowse link 16 71,265,390 71,319,046 RGD:8554872
G Fgfr2 fibroblast growth factor receptor 2 JBrowse link 1 200,590,951 200,696,946 RGD:8554872
G Gnas GNAS complex locus JBrowse link 3 172,374,957 172,434,988 RGD:8554872
G Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 RGD:9854641
G Hras HRas proto-oncogene, GTPase JBrowse link 1 214,178,404 214,181,841 RGD:8554872
G Irf1 interferon regulatory factor 1 JBrowse link 10 39,109,530 39,116,532 RGD:1600013
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:8554872
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:8554872
G Lrrc56 leucine rich repeat containing 56 JBrowse link 1 214,182,232 214,197,184 RGD:8554872
G Map2k1 mitogen activated protein kinase kinase 1 JBrowse link 8 69,134,218 69,722,573 RGD:8554872
G Map2k2 mitogen activated protein kinase kinase 2 JBrowse link 7 11,458,971 11,478,520 RGD:8554872
G Med12 mediator complex subunit 12 JBrowse link X 71,174,653 71,197,812 RGD:8554872
G Mir20a microRNA 20a JBrowse link 15 100,180,334 100,180,418 RGD:25823155
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:8554872
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:8554872
G Nras NRAS proto-oncogene, GTPase JBrowse link 2 205,553,119 205,563,716 RGD:8554872
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:8554872
G Pmepa1 prostate transmembrane protein, androgen induced 1 JBrowse link 3 171,295,630 171,342,662 RGD:2315108
G Pole DNA polymerase epsilon, catalytic subunit JBrowse link 12 52,403,533 52,452,075 RGD:8554872
G Ppp2r1a protein phosphatase 2 scaffold subunit A alpha JBrowse link 1 60,717,386 60,736,629 RGD:8554872
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:8554872
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 JBrowse link 12 40,895,515 40,955,999 RGD:8554872
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase JBrowse link 4 147,532,040 147,592,769 RGD:8554872
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:8554872
G Smad4 SMAD family member 4 JBrowse link 18 69,626,682 69,657,373 RGD:8554872
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:8554872
RGD:14995496
gastric body carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnmt3b DNA methyltransferase 3 beta JBrowse link 3 149,131,541 149,170,061 RGD:9589084
gastric cardia adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alb albumin JBrowse link 14 19,176,275 19,191,793 RGD:11035298
linitis plastica term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Psca prostate stem cell antigen JBrowse link 7 116,090,189 116,091,955 RGD:11554173
stomach carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp6v1c1 ATPase H+ transporting V1 subunit C1 JBrowse link 7 77,678,853 77,716,658 RGD:14700649
G Bcl2l10 BCL2 like 10 JBrowse link 8 82,288,705 82,294,750 RGD:14392807
G Birc5 baculoviral IAP repeat-containing 5 JBrowse link 10 106,856,097 106,864,419 RGD:2293138
G Cbx7 chromobox 7 JBrowse link 7 121,136,067 121,153,503 RGD:9587355
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:8662389
G Kdm4a lysine demethylase 4A JBrowse link 5 136,967,650 137,014,402 RGD:9587437
G Kdm4c lysine demethylase 4C JBrowse link 5 90,800,139 91,012,662 RGD:9588260
G Kdm5a lysine demethylase 5A JBrowse link 4 152,892,388 152,972,196 RGD:9588529
G Kmt2c lysine methyltransferase 2C JBrowse link 4
4
82,506
6,083,650
109,986
6,294,413
RGD:9588234
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:1600468
G Letmd1 LETM1 domain containing 1 JBrowse link 7 142,106,364 142,119,900 RGD:2314918
G Mdc1 mediator of DNA damage checkpoint 1 JBrowse link 20 3,405,017 3,419,831 RGD:9589059
G Mmp1 matrix metallopeptidase 1 JBrowse link 8 5,703,206 5,723,593 RGD:7206857
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:2325777
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:2325777
G Mre11 MRE11 homolog, double strand break repair nuclease JBrowse link 8 13,304,355 13,350,329 RGD:2317738
G Mutyh mutY DNA glycosylase JBrowse link 5 135,663,328 135,675,348 RGD:1600201
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:5683907
G Sparc secreted protein acidic and cysteine rich JBrowse link 10 40,742,390 40,764,232 RGD:2300058
G Spint1 serine peptidase inhibitor, Kunitz type 1 JBrowse link 3 111,049,132 111,061,991 RGD:1581312

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16021
    disease of anatomical entity 15274
      gastrointestinal system disease 4615
        stomach disease 531
          Stomach Neoplasms 375
            stomach cancer 109
              cardia cancer + 1
              gastric adenocarcinoma + 42
              gastric fundus cancer + 0
              gastric gastrinoma 0
              gastric leiomyosarcoma 0
              gastric liposarcoma 0
              gastric lymphoma 0
              gastric teratoma + 0
              malignant gastric germ cell tumor + 0
              malignant gastric granular cell tumor 0
              pylorus cancer + 0
              stomach carcinoma + 62
Path 2
Term Annotations click to browse term
  disease 16021
    disease of anatomical entity 15274
      gastrointestinal system disease 4615
        Gastrointestinal Diseases 2556
          Gastrointestinal Neoplasms 1760
            gastrointestinal system cancer 1260
              stomach cancer 109
                cardia cancer + 1
                gastric adenocarcinoma + 42
                gastric fundus cancer + 0
                gastric gastrinoma 0
                gastric leiomyosarcoma 0
                gastric liposarcoma 0
                gastric lymphoma 0
                gastric teratoma + 0
                malignant gastric germ cell tumor + 0
                malignant gastric granular cell tumor 0
                pylorus cancer + 0
                stomach carcinoma + 62
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.