ONTOLOGY REPORT - ANNOTATIONS


Term:alpha thalassemia
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Accession:DOID:1099 term browser browse the term
Definition:A disorder characterized by reduced synthesis of the alpha chains of hemoglobin. The severity of this condition can vary from mild anemia to death, depending on the number of genes deleted.
Synonyms:exact_synonym: A-Thalassemia;   ALPHA-THALASSEMIA AND RELATED DISEASES;   ALPHA-THALASSEMIA, HMONG TYPE;   Alpha thalassaemia;   alpha-Thalassemias
 related_synonym: HEMOGLOBIN PRATO;   Hemoglobin Constant Spring;   Hemoglobin New York;   hemoglobin Quong Sze
 primary_id: MESH:D017085
 alt_id: OMIM:604131;   RDO:0004214
 xref: GARD:621
For additional species annotation, visit the Alliance of Genome Resources.


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alpha thalassemia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpx1 glutathione peroxidase 1 JBrowse link 8 117,117,430 117,118,528 RGD:11352811
G Hba-a1 hemoglobin alpha, adult chain 1 JBrowse link 10 15,602,794 15,603,649 RGD:10449442
RGD:11353869
RGD:10755575
RGD:10755570
RGD:10755568
RGD:10755567
G Hba-a2 hemoglobin alpha, adult chain 2 JBrowse link 10 15,589,364 15,590,207 RGD:1599361
RGD:8554872
RGD:11554173
RGD:7240710
RGD:10449442
G Hbb hemoglobin subunit beta JBrowse link 1 168,971,269 168,972,680 RGD:11353869
RGD:8554872
RGD:11554173
G Hbq1b hemoglobin subunit theta 1B JBrowse link 10 15,599,821 15,602,680 RGD:8554872
G Hbz hemoglobin subunit zeta JBrowse link 10 15,609,348 15,610,826 RGD:8554872
G Hp haptoglobin JBrowse link 19 42,096,255 42,100,805 RGD:11041792
alpha thalassemia-X-linked intellectual disability syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atr ATR serine/threonine kinase JBrowse link 8 103,673,578 103,770,886 RGD:8554872
G Atrx ATRX, chromatin remodeler JBrowse link X 76,820,110 76,979,155 RGD:7240710
RGD:8554872
RGD:9586030
RGD:9586029
RGD:9586027
Alpha-Thalassemia 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hba-a2 hemoglobin alpha, adult chain 2 JBrowse link 10 15,589,364 15,590,207 RGD:8554872
Alpha-Thalassemia Myelodysplasia Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atrx ATRX, chromatin remodeler JBrowse link X 76,820,110 76,979,155 RGD:7240710
RGD:8554872
Alpha-Thalassemia-2, Nondeletional term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hba-a2 hemoglobin alpha, adult chain 2 JBrowse link 10 15,589,364 15,590,207 RGD:8554872
Dehydrated Hereditary Stomatocytosis, Pseudohyperkalemia, and Perinatal Edema term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Piezo1 piezo-type mechanosensitive ion channel component 1 JBrowse link 19 55,305,494 55,367,680 RGD:7240710
RGD:8554872
Greenberg Dysplasia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lbr lamin B receptor JBrowse link 13 100,431,390 100,450,209 RGD:7240710
RGD:8554872
RGD:9588626
hemoglobin H disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hba-a2 hemoglobin alpha, adult chain 2 JBrowse link 10 15,589,364 15,590,207 RGD:7240710
RGD:8554872
Hydrops Fetalis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alb albumin JBrowse link 14 19,176,275 19,191,793 RGD:11036098
G Ccbe1 collagen and calcium binding EGF domains 1 JBrowse link 18 61,758,754 62,013,194 RGD:11554173
G Chrna1 cholinergic receptor nicotinic alpha 1 subunit JBrowse link 3 60,445,657 60,460,724 RGD:8554872
G Ctsa cathepsin A JBrowse link 3 161,298,750 161,304,627 RGD:8554872
G Dnah14 dynein axonemal heavy chain 14 JBrowse link 13
13
99,886,373
101,936,210
100,072,674
101,973,640
RGD:8554872
G Fzd6 frizzled class receptor 6 JBrowse link 7 77,898,329 77,931,034 RGD:8554872
G Galnt14 polypeptide N-acetylgalactosaminyltransferase 14 JBrowse link 6 24,770,308 24,985,711 RGD:8554872
G Gusb glucuronidase, beta JBrowse link 12 30,202,066 30,215,583 RGD:8554872
G Jak3 Janus kinase 3 JBrowse link 16 20,107,471 20,120,678 RGD:8554872
G Myom1 myomesin 1 JBrowse link 9 119,353,840 119,469,196 RGD:8554872
G Neb nebulin JBrowse link 3 37,658,081 37,855,843 RGD:8554872
G Pigc phosphatidylinositol glycan anchor biosynthesis, class C JBrowse link 13 79,886,832 79,889,305 RGD:8554872
G RGD1309106 similar to hypothetical protein JBrowse link 13 79,856,479 79,901,830 RGD:8554872
G Sftpa1 surfactant protein A1 JBrowse link 16 18,716,019 18,719,404 RGD:4143453
G Thsd1 thrombospondin type 1 domain containing 1 JBrowse link 16 74,680,621 74,712,368 RGD:8554872
G Ubn1 ubinuclein 1 JBrowse link 10 10,690,224 10,725,655 RGD:8554872
Hydrops Fetalis, Nonimmune, and/or Atrial Septal Defect term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ephb4 EPH receptor B4 JBrowse link 12 22,393,338 22,418,332 RGD:8554872
RGD:7240710
HYDROPS, LACTIC ACIDOSIS, AND SIDEROBLASTIC ANEMIA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lars2 leucyl-tRNA synthetase 2, mitochondrial JBrowse link 8 132,441,277 132,537,176 RGD:8554872
RGD:7240710

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14920
    Developmental Diseases 7769
      Congenital, Hereditary, and Neonatal Diseases and Abnormalities 7091
        genetic disease 6451
          congenital hemolytic anemia 123
            thalassemia 62
              alpha thalassemia 29
                Alpha-Thalassemia 2 + 1
                Alpha-Thalassemia Myelodysplasia Syndrome 1
                Hydrops Fetalis + 20
                alpha thalassemia-X-linked intellectual disability syndrome 2
                alpha thalassemia-intellectual disability syndrome type 1 0
                hemoglobin H disease 1
Path 2
Term Annotations click to browse term
  disease 14920
    disease of anatomical entity 14086
      Hemic and Lymphatic Diseases 1591
        hematopoietic system disease 1375
          anemia 369
            normocytic anemia 173
              hemolytic anemia 173
                congenital hemolytic anemia 123
                  hemoglobinopathy 92
                    thalassemia 62
                      alpha thalassemia 29
                        Alpha-Thalassemia 2 + 1
                        Alpha-Thalassemia Myelodysplasia Syndrome 1
                        Hydrops Fetalis + 20
                        alpha thalassemia-X-linked intellectual disability syndrome 2
                        alpha thalassemia-intellectual disability syndrome type 1 0
                        hemoglobin H disease 1
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.