Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:sigmoid colon cancer
go back to main search page
Accession:DOID:12192 term browser browse the term
Synonyms:exact_synonym: Ca sigmoid colon;   malignant tumor of sigmoid colon
 xref: ICD10CM:C18.7;   ICD9CM:153.3
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
 
sigmoid colon cancer term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Malignant tumor of sigmoid colon ClinVar PMID:25741868 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531
JBrowse link
G Msh2 mutS homolog 2 ISO ClinVar Annotator: match by term: Malignant tumor of sigmoid colon ClinVar PMID:10495924, PMID:12658575, PMID:20215533, PMID:24323032, PMID:25117503, PMID:25648859, PMID:25741868, PMID:26659639, PMID:27013479, PMID:28492532, PMID:28790115 NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932
JBrowse link
G Msh6 mutS homolog 6 ISO ClinVar Annotator: match by term: Malignant tumor of sigmoid colon ClinVar PMID:9354786, PMID:12376507, PMID:18809606, PMID:19924528, PMID:20176959, PMID:22283331, PMID:24710284, PMID:24728327, PMID:25536104, PMID:25741868, PMID:26046366, PMID:26467025, PMID:28492532 NCBI chr 6:11,644,565...11,662,389
Ensembl chr 6:11,644,578...11,662,499
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16108
    disease of anatomical entity 15356
      gastrointestinal system disease 4673
        intestinal disease 1496
          colonic disease 1012
            Colorectal Neoplasms 669
              Colonic Neoplasms 293
                colon cancer 132
                  sigmoid colon cancer 3
                    rectosigmoid junction cancer + 0
Path 2
Term Annotations click to browse term
  disease 16108
    disease of anatomical entity 15356
      gastrointestinal system disease 4673
        Gastrointestinal Diseases 2599
          intestinal disease 1496
            Intestinal Neoplasms 690
              intestinal cancer 249
                large intestine cancer 245
                  colorectal cancer 245
                    colon cancer 132
                      sigmoid colon cancer 3
                        rectosigmoid junction cancer + 0
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.