ONTOLOGY REPORT - ANNOTATIONS


Term:vitiligo
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Accession:DOID:12306 term browser browse the term
Definition:A disorder consisting of areas of macular depigmentation, commonly on extensor aspects of extremities, on the face or neck, and in skin folds. Age of onset is often in young adulthood and the condition tends to progress gradually with lesions enlarging and extending until a quiescent state is reached.
Synonyms:exact_synonym: SLEV1;   VTLG;   vitiligo-related systemic lupus erythematosus
 related_synonym: AIS1;   AIS2;   AIS3;   AIS4;   AUTOIMMUNE DISEASE SUSCEPTIBILITY LOCUS, CHROMOSOME 1p-RELATED;   AUTOIMMUNE DISEASE SUSCEPTIBILITY LOCUS, CHROMOSOME 4-RELATED;   AUTOIMMUNE DISEASE SUSCEPTIBILITY LOCUS, CHROMOSOME 7-RELATED;   AUTOIMMUNE DISEASE SUSCEPTIBILITY LOCUS, CHROMOSOME 8-RELATED;   Autoimmune Disease, Susceptibility To, 1;   Autoimmune Disease, Susceptibility To, 2;   Autoimmune Disease, Susceptibility To, 3;   Autoimmune Disease, Susceptibility To, 4;   VAMAS1;   VAMAS2;   VAMAS3;   VAMAS4;   VAMAS5;   VAMAS6;   Vitiligo-Associated Multiple Autoimmune Disease Susceptibility 1;   Vitiligo-Associated Multiple Autoimmune Disease Susceptibility 2;   Vitiligo-Associated Multiple Autoimmune Disease Susceptibility 3;   Vitiligo-Associated Multiple Autoimmune Disease Susceptibility 4;   Vitiligo-Associated Multiple Autoimmune Disease Susceptibility 5;   Vitiligo-Associated Multiple Autoimmune Disease Susceptibility 6
 primary_id: MESH:D014820
 alt_id: DOID:9000530;   DOID:9002171;   DOID:9002982;   DOID:9004411;   DOID:9005998;   DOID:9008547;   OMIM:193200;   OMIM:606579;   OMIM:607836;   OMIM:608391;   OMIM:608392;   OMIM:609400;   RDO:0002277;   RDO:0009038;   RDO:0009144;   RDO:0009194;   RDO:0009195;   RDO:0009314;   RDO:0010109
 xref: GARD:10751
For additional species annotation, visit the Alliance of Genome Resources.


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vitiligo term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bach2 BTB domain and CNC homolog 2 JBrowse link 5 47,458,891 47,807,176 RGD:11554173
G C3 complement C3 JBrowse link 9 9,721,137 9,747,084 RGD:7401277
G C4a complement C4A JBrowse link 20 2,651,599 2,678,183 RGD:5688264
G Casp7 caspase 7 JBrowse link 1 277,190,557 277,242,779 RGD:11554173
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:9479149
RGD:9479169
RGD:9479150
G Ccr6 C-C motif chemokine receptor 6 JBrowse link 1 53,063,380 53,087,519 RGD:11554173
G Cd44 CD44 molecule (Indian blood group) JBrowse link 3 92,695,083 92,783,820 RGD:11554173
G Cd80 Cd80 molecule JBrowse link 11 64,815,201 64,855,293 RGD:11554173
G Clnk cytokine-dependent hematopoietic cell linker JBrowse link 14 76,657,165 76,834,050 RGD:11554173
G Clu clusterin JBrowse link 15 42,626,612 42,665,858 RGD:8699503
G Comt catechol-O-methyltransferase JBrowse link 11 86,715,981 86,735,630 RGD:8662333
RGD:8662336
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 JBrowse link 9 67,699,397 67,706,068 RGD:7411687
RGD:7411699
RGD:7411697
RGD:7411696
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:8552976
G Foxd3 forkhead box D3 JBrowse link 5 118,346,283 118,349,120 RGD:7240710
RGD:8554872
G Foxp1 forkhead box P1 JBrowse link 4 131,362,178 131,963,466 RGD:11554173
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:8548598
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link 20 4,875,834 4,881,751 RGD:8662840
G Ifih1 interferon induced with helicase C domain 1 JBrowse link 3 48,557,696 48,604,097 RGD:11554173
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:8157616
G Ikzf4 IKAROS family zinc finger 4 JBrowse link 7 3,061,422 3,098,142 RGD:11554173
G Il13 interleukin 13 JBrowse link 10 38,982,909 38,985,466 RGD:8549591
G Il17a interleukin 17A JBrowse link 9 26,841,299 26,844,786 RGD:8663475
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:7794736
RGD:11554173
G Il2 interleukin 2 JBrowse link 2 123,847,150 123,851,854 RGD:8663475
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:8663475
G Kif1b kinesin family member 1B JBrowse link 5 165,994,803 166,133,497 RGD:8554872
G Mbl2 mannose binding lectin 2 JBrowse link 1 248,435,069 248,442,669 RGD:8693723
RGD:8693724
G Mc1r melanocortin 1 receptor JBrowse link 19 56,215,420 56,219,987 RGD:11554173
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:11554173
G Nlrp1a NLR family, pyrin domain containing 1A JBrowse link 10 57,692,474 57,747,608 RGD:7240710
RGD:8554872
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 JBrowse link 2 31,742,326 31,826,882 RGD:11554173
G Psmb9 proteasome subunit beta 9 JBrowse link 20 3,973,424 3,978,845 RGD:1578358
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 JBrowse link 2 206,342,066 206,390,348 RGD:6484552
RGD:7829737
G RT1-Ba RT1 class II, locus Ba JBrowse link 20 4,066,133 4,070,726 RGD:8547566
G RT1-Bb RT1 class II, locus Bb JBrowse link 20 4,043,726 4,049,367 RGD:5147644
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:5147644
G Sh2b3 SH2B adaptor protein 3 JBrowse link 12 40,261,990 40,265,757 RGD:11554173
G Sla src-like adaptor JBrowse link 7 107,585,055 107,604,950 RGD:11554173
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:8547522
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:8663475
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:7777152
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:7777152
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:7794736
RGD:11554173
G Tob2 transducer of ERBB2, 2 JBrowse link 7 123,079,520 123,088,240 RGD:11554173
G Tyr tyrosinase JBrowse link 1 151,012,598 151,106,802 RGD:8694387
RGD:8694409
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:8158061
RGD:8158066
hereditary spastic paraplegia 23 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dstyk dual serine/threonine and tyrosine protein kinase JBrowse link 13 49,195,325 49,243,327 RGD:7240710

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14823
    disease of anatomical entity 13997
      immune system disease 2440
        hypersensitivity reaction disease 1488
          autoimmune hypersensitivity disease 1197
            vitiligo 47
              Alopecia Universalis, Onychodystrophy, Vitiligo 0
              Congenital Deafness, with Vitiligo and Achalasia 0
              Progressive Vitiligo with Mental Retardation and Urethral Duplication 0
              Schrander-Stumpel Theunissen Hulsmans Syndrome 0
              hereditary spastic paraplegia 23 1
Path 2
Term Annotations click to browse term
  disease 14823
    disease of anatomical entity 13997
      nervous system disease 9111
        sensory system disease 4244
          skin disease 2253
            pigmentation disease 212
              Hypopigmentation 103
                vitiligo 47
                  Alopecia Universalis, Onychodystrophy, Vitiligo 0
                  Congenital Deafness, with Vitiligo and Achalasia 0
                  Progressive Vitiligo with Mental Retardation and Urethral Duplication 0
                  Schrander-Stumpel Theunissen Hulsmans Syndrome 0
                  hereditary spastic paraplegia 23 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.