ONTOLOGY REPORT - ANNOTATIONS


Term:leiomyoma
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Accession:DOID:127 term browser browse the term
Definition:A benign tumor derived from smooth muscle tissue, also known as a fibroid tumor. They rarely occur outside of the UTERUS and the GASTROINTESTINAL TRACT but can occur in the SKIN and SUBCUTANEOUS TISSUE, probably arising from the smooth muscle of small blood vessels in these tissues.
Synonyms:exact_synonym: Fibroid;   Fibroid Tumor;   Fibroid Tumors;   Fibroid Uterus;   Fibroids;   Fibromyoma;   Fibromyomas;   Leiomyomas;   Uterine Fibroma;   Uterine Fibromas;   leiomyomatous neoplasm;   leiomyomatous tumor
 primary_id: MESH:D007889
 alt_id: RDO:0005971
For additional species annotation, visit the Alliance of Genome Resources.


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leiomyoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ar androgen receptor JBrowse link X 67,656,253 67,828,998 RGD:1578690
G Bak1 BCL2-antagonist/killer 1 JBrowse link 20 5,609,620 5,618,899 RGD:1643479
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:10054112
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1643479
RGD:10054112
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:1643479
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:2296031
G Ccng1 cyclin G1 JBrowse link 10 25,903,925 25,910,298 RGD:2316023
G Comt catechol-O-methyltransferase JBrowse link 11 86,715,981 86,735,630 RGD:2289780
RGD:2289717
G Csnk2b casein kinase 2 beta JBrowse link 20 5,108,692 5,113,675 RGD:11565842
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:11554173
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit JBrowse link 4 77,284,404 77,347,011 RGD:9588321
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:2292498
G Fgf1 fibroblast growth factor 1 JBrowse link 18 32,273,830 32,359,831 RGD:2290287
G Fgf2 fibroblast growth factor 2 JBrowse link 2 124,081,072 124,134,133 RGD:2290287
G Fgf7 fibroblast growth factor 7 JBrowse link 3 118,315,859 118,368,464 RGD:2301090
G Fzd2 frizzled class receptor 2 JBrowse link 10 90,550,147 90,552,057 RGD:2298700
G Hmga2 high mobility group AT-hook 2 JBrowse link 7 65,159,944 65,275,408 RGD:1601568
G Hnrnpm heterogeneous nuclear ribonucleoprotein M JBrowse link 7 18,516,253 18,554,536 RGD:2301090
G Igfbp6 insulin-like growth factor binding protein 6 JBrowse link 7 143,749,385 143,754,018 RGD:2301708
G Inhba inhibin subunit beta A JBrowse link 17 51,894,869 51,919,998 RGD:11554173
G Kat6b lysine acetyltransferase 6B JBrowse link 15 2,811,933 2,966,833 RGD:9590338
G Kif5c kinesin family member 5C JBrowse link 3 35,014,157 35,257,417 RGD:12859089
G Lnpep leucyl and cystinyl aminopeptidase JBrowse link 1 59,289,392 59,384,540 RGD:2314924
G Mki67 marker of proliferation Ki-67 JBrowse link 1 207,993,895 208,020,454 RGD:6483544
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:2290362
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:6483544
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:2292088
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:10413890
G Pcna proliferating cell nuclear antigen JBrowse link 3 124,880,698 124,884,570 RGD:2292498
RGD:10413890
G Pcp4 Purkinje cell protein 4 JBrowse link 11 36,851,035 36,912,272 RGD:9850247
G Pdgfa platelet derived growth factor subunit A JBrowse link 12 17,734,141 17,756,186 RGD:2292153
G Pdgfb platelet derived growth factor subunit B JBrowse link 7 121,215,458 121,233,092 RGD:2292153
G Pgr progesterone receptor JBrowse link 8 7,128,656 7,187,796 RGD:1601278
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:2292508
RGD:2292498
G Ptger3 prostaglandin E receptor 3 JBrowse link 2 263,895,093 263,979,682 RGD:10043352
G Ptk2 protein tyrosine kinase 2 JBrowse link 7 114,436,419 114,611,317 RGD:2292569
G Sfrp1 secreted frizzled-related protein 1 JBrowse link 16 73,372,007 73,410,777 RGD:2298808
RGD:11554173
G Smad3 SMAD family member 3 JBrowse link 8 68,569,530 68,678,349 RGD:11554173
G Tgfbr1 transforming growth factor, beta receptor 1 JBrowse link 5 63,056,071 63,119,635 RGD:2302021
G Tsc2 TSC complex subunit 2 JBrowse link 10 13,962,006 13,996,684 RGD:11554173
RGD:11568684
G Wnt5b Wnt family member 5B JBrowse link 4 151,500,962 151,516,894 RGD:2298808
RGD:11554173
G Wnt7a Wnt family member 7A JBrowse link 4 122,994,425 123,040,609 RGD:2298847
G Xrcc1 X-ray repair cross complementing 1 JBrowse link 1 81,412,635 81,441,680 RGD:2302578
Epithelioid Leiomyoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Col4a5 collagen type IV alpha 5 chain JBrowse link X 112,769,595 112,983,720 RGD:11554173
G Col4a6 collagen type IV alpha 6 chain JBrowse link X 112,405,647 112,768,337 RGD:11554173
Hereditary Leiomyomatosis and Renal Cell Cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fh fumarate hydratase JBrowse link 13 93,651,486 93,677,371 RGD:1598939
RGD:8554872
RGD:11554173
RGD:7240710
leiomyoma cutis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fh fumarate hydratase JBrowse link 13 93,651,486 93,677,371 RGD:8554872
leiomyomatosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd44 CD44 molecule (Indian blood group) JBrowse link 3 92,695,083 92,783,820 RGD:2296043
subserous uterine fibroid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tnrc6b trinucleotide repeat containing adaptor 6B JBrowse link 7 121,930,610 122,147,934 RGD:14394614
uterine fibroid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bet1l Bet1 golgi vesicular membrane trafficking protein-like JBrowse link 1 213,602,836 213,606,507 RGD:14394614
G Fh fumarate hydratase JBrowse link 13 93,651,486 93,677,371 RGD:8554872
G Hmga2 high mobility group AT-hook 2 JBrowse link 7 65,159,944 65,275,408 RGD:7240710
G Med12 mediator complex subunit 12 JBrowse link X 71,174,653 71,197,812 RGD:8554872
G Ptch1 patched 1 JBrowse link 17 1,032,242 1,085,885 RGD:8554872
G Tnrc6b trinucleotide repeat containing adaptor 6B JBrowse link 7 121,930,610 122,147,934 RGD:14394614
G Tsc2 TSC complex subunit 2 JBrowse link 10 13,962,006 13,996,684 RGD:13592920
uterus interstitial leiomyoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:1643479

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14920
    disease of cellular proliferation 5588
      benign neoplasm 1179
        cell type benign neoplasm 635
          leiomyoma 51
            Epithelioid Leiomyoma 2
            angiomyoma + 0
            anus leiomyoma 0
            appendix leiomyoma 0
            bizarre leiomyoma + 0
            bladder leiomyoma 0
            breast leiomyoma 0
            cellular leiomyoma + 0
            central nervous system leiomyoma 0
            deep leiomyoma 0
            esophagus leiomyoma 0
            extrahepatic bile duct leiomyoma 0
            fallopian tube leiomyoma 0
            gallbladder leiomyoma 0
            large bowel leiomyoma + 0
            larynx leiomyoma 0
            leiomyoma cutis 1
            leiomyomatosis + 2
            liver leiomyoma 0
            lung leiomyoma + 0
            mediastinum leiomyoma 0
            pericardium leiomyoma 0
            prostate leiomyoma 0
            small intestine leiomyoma 0
            trachea leiomyoma + 0
            ureter leiomyoma 0
            urethra leiomyoma 0
            uterine fibroid + 8
            vagina leiomyoma 0
Path 2
Term Annotations click to browse term
  disease 14920
    disease of anatomical entity 14086
      nervous system disease 9150
        peripheral nervous system disease 2017
          neuropathy 1838
            neuromuscular disease 1413
              muscular disease 908
                muscle tissue disease 635
                  Muscle Tissue Neoplasms 106
                    leiomyoma 51
                      Epithelioid Leiomyoma 2
                      angiomyoma + 0
                      anus leiomyoma 0
                      appendix leiomyoma 0
                      bizarre leiomyoma + 0
                      bladder leiomyoma 0
                      breast leiomyoma 0
                      cellular leiomyoma + 0
                      central nervous system leiomyoma 0
                      deep leiomyoma 0
                      esophagus leiomyoma 0
                      extrahepatic bile duct leiomyoma 0
                      fallopian tube leiomyoma 0
                      gallbladder leiomyoma 0
                      large bowel leiomyoma + 0
                      larynx leiomyoma 0
                      leiomyoma cutis 1
                      leiomyomatosis + 2
                      liver leiomyoma 0
                      lung leiomyoma + 0
                      mediastinum leiomyoma 0
                      pericardium leiomyoma 0
                      prostate leiomyoma 0
                      small intestine leiomyoma 0
                      trachea leiomyoma + 0
                      ureter leiomyoma 0
                      urethra leiomyoma 0
                      uterine fibroid + 8
                      vagina leiomyoma 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.