ONTOLOGY REPORT - ANNOTATIONS


Term:fragile X syndrome
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Accession:DOID:14261 term browser browse the term
Definition:A condition characterized genotypically by mutation of the distal end of the long arm of the X chromosome (at gene loci FRAXA or FRAXE) and phenotypically by cognitive impairment, hyperactivity, SEIZURES, language delay, and enlargement of the ears, head, and testes. INTELLECTUAL DISABILITY occurs in nearly all males and roughly 50% of females with the full mutation of FRAXA. (From Menkes, Textbook of Child Neurology, 5th ed, p226)
Synonyms:exact_synonym: FRAXA Syndrome;   FRAXA Syndromes;   FRAXE MENTAL RETARDATION SYNDROME;   FRAXE Syndrome;   FRAXE Syndromes;   Fra(X) Syndrome;   Fragile X Mental Retardation Syndrome;   Fragile X Syndromes;   Mar (X) Syndrome;   Marker X Syndrome;   Marker X Syndromes;   Martin Bell Syndrome;   Mental Retardation, X-Linked, Associated With Fragile Site Fraxe;   Mental Retardation, X-Linked, Associated With Marxq28;   X-linked mental retardation and macroorchidism;   fragile X-F mental retardation syndrome
 primary_id: MESH:D005600
 alt_id: OMIM:300624;   OMIM:309548;   RDO:0000107
 xref: GARD:6464;   ORDO:908
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fragile X syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgb androglobin JBrowse link 1 4,445,039 4,588,507 RGD:8554872
G Aff2 AF4/FMR2 family, member 2 JBrowse link X 153,539,951 154,051,022 RGD:7240710
RGD:8554872
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:11554173
G Cyfip1 cytoplasmic FMR1 interacting protein 1 JBrowse link 1 114,258,773 114,347,138 RGD:11558008
G Ercc6 ERCC excision repair 6, chromatin remodeling factor JBrowse link 16 8,734,028 8,804,610 RGD:10401097
G Fmr1 fragile X mental retardation 1 JBrowse link X 154,684,924 154,722,369 RGD:1601178
RGD:8554872
RGD:11554173
RGD:11566052
RGD:11566028
RGD:7240710
G Grm1 glutamate metabotropic receptor 1 JBrowse link 1 4,753,141 5,165,859 RGD:8554872
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:13204755
RGD:11572344
G Nrxn3 neurexin 3 JBrowse link 6 112,133,204 114,069,589 RGD:11554325
G Rab32 RAB32, member RAS oncogene family JBrowse link 1 4,638,663 4,653,220 RGD:8554872
G Serpina1 serpin family A member 1 JBrowse link 6 127,610,241 127,632,265 RGD:8554872
fragile X-associated tremor/ataxia syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fmr1 fragile X mental retardation 1 JBrowse link X 154,684,924 154,722,369 RGD:7240710
RGD:12050151
RGD:11554173
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:8655858
Primary Ovarian Insufficiency, Fragile X-Associated term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aadac arylacetamide deacetylase JBrowse link 2 150,146,234 150,157,480 RGD:8554872
G Fmr1 fragile X mental retardation 1 JBrowse link X 154,684,924 154,722,369 RGD:12050152

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14875
    syndrome 4220
      fragile X syndrome 13
        Primary Ovarian Insufficiency, Fragile X-Associated 2
        Saul Wilkes Stevenson syndrome 0
        fragile X-associated tremor/ataxia syndrome 2
Path 2
Term Annotations click to browse term
  disease 14875
    disease of anatomical entity 14051
      nervous system disease 9116
        central nervous system disease 6913
          brain disease 6418
            disease of mental health 4325
              developmental disorder of mental health 2595
                specific developmental disorder 1330
                  intellectual disability 1158
                    syndromic intellectual disability 211
                      Mental Retardation, X-Linked 198
                        fragile X syndrome 13
                          Primary Ovarian Insufficiency, Fragile X-Associated 2
                          Saul Wilkes Stevenson syndrome 0
                          fragile X-associated tremor/ataxia syndrome 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.