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ONTOLOGY REPORT - ANNOTATIONS


Term:breast cancer
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Accession:DOID:1612 term browser browse the term
Definition:A thoracic cancer that originates in the mammary gland. (DO)
Synonyms:exact_synonym: BRCATA;   Breast Cancer, Early Onset;   Breast Cancer, Lobular;   Breast Cancer, Post-Chemotherapy Poor Survival In;   Breast Cancer, Somatic;   Breast Malignant Neoplasms;   Breast Malignant Tumor;   Breast Malignant Tumors;   cancer of breast;   malignant neoplasm breast;   malignant neoplasm of breast;   malignant neoplasm of female breast;   malignant tumor of breast;   malignant tumor of the breast;   mammary cancer;   mammary tumor;   primary breast cancer
 narrow_synonym: BREAST CANCER, FAMILIAL BREAST CANCER, FAMILIAL MALE;   breast cancer, 11-22 translocation-associated
 related_synonym: breast cancer, invasive ductal;   breast cancer, protection against;   breast cancer, susceptibility to
 alt_id: OMIM:114480
 xref: ICD10CM:C50;   ICD10CM:C50-C50;   NCI:C9335
For additional species annotation, visit the Alliance of Genome Resources.


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breast cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acsl3 acyl-CoA synthetase long chain family member 3 JBrowse link NW_004955453 10,916,423 10,963,986 RGD:9068941
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link NW_004955420 20,911,181 20,922,992 RGD:9068941
G Adipor1 adiponectin receptor 1 JBrowse link NW_004955406 38,939,167 38,955,647 RGD:9068941
G Adipor2 adiponectin receptor 2 JBrowse link NW_004955454 4,243,898 4,327,255 RGD:9068941
G Adm adrenomedullin JBrowse link NW_004955414 25,951,473 25,953,593 RGD:9068941
G Adsl adenylosuccinate lyase JBrowse link NW_004955413 26,067,463 26,084,669 RGD:9068941
G Agr2 anterior gradient 2, protein disulphide isomerase family member JBrowse link NW_004955410 19,984,768 19,995,446 RGD:9068941
G Agt angiotensinogen JBrowse link NW_004955492 7,863,662 7,874,863 RGD:9068941
G Agtr1 angiotensin II receptor type 1 JBrowse link NW_004955474 8,733,942 8,781,305 RGD:9068941
G Aif1l allograft inflammatory factor 1 like JBrowse link NW_004955513 936,889 954,667 RGD:9068941
G Akr1a1 aldo-keto reductase family 1 member A1 JBrowse link NW_004955464 12,715,238 12,729,034 RGD:9068941
G Akt1 AKT serine/threonine kinase 1 JBrowse link NW_004955538 3,208,711 3,224,386 RGD:7240710
G Alk ALK receptor tyrosine kinase JBrowse link NW_004955469 11,049,373 11,751,235 RGD:9068941
G Alox5ap arachidonate 5-lipoxygenase activating protein JBrowse link NW_004955431 15,071,535 15,097,496 RGD:9068941
G Amh anti-Mullerian hormone JBrowse link NW_004955495 5,893,375 5,896,152 RGD:9068941
G Antxr1 ANTXR cell adhesion molecule 1 JBrowse link NW_004955424 15,820,734 16,034,278 RGD:9068941
G Anxa7 annexin A7 JBrowse link NW_004955437 18,394,371 18,421,779 RGD:9068941
G Apc APC regulator of WNT signaling pathway JBrowse link NW_004955418 2,567,804 2,675,062 RGD:9068941
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 JBrowse link NW_004955550 1,273,170 1,275,843 RGD:9068941
G Apoe apolipoprotein E JBrowse link NW_004955555 1,998,170 2,002,003 RGD:9068941
G Areg amphiregulin JBrowse link NW_004955474 680,212 689,021 RGD:9068941
G Asf1b anti-silencing function 1B histone chaperone JBrowse link NW_004955415 32,818,592 32,828,651 RGD:9068941
G Atm ATM serine/threonine kinase JBrowse link NW_004955412 10,422,753 10,531,406 RGD:7240710
RGD:9068941
G Axin2 axin 2 JBrowse link NW_004955478 4,952,551 4,982,223 RGD:9068941
G Bad BCL2 associated agonist of cell death JBrowse link NW_004955422 20,795,585 20,809,039 RGD:9068941
G Bag1 BAG cochaperone 1 JBrowse link NW_004955472 2,394,317 2,405,199 RGD:9068941
G Bard1 BRCA1 associated RING domain 1 JBrowse link NW_004955457 1,187,942 1,258,475 RGD:7240710
RGD:9068941
G Bax BCL2 associated X, apoptosis regulator JBrowse link NW_004955559 1,695,960 1,700,246 RGD:9068941
G Bcar1 BCAR1 scaffold protein, Cas family member JBrowse link NW_004955484 2,223,306 2,258,444 RGD:9068941
G Bcas2 BCAS2 pre-mRNA processing factor JBrowse link NW_004955435 17,830,532 17,857,360 RGD:9068941
G Bcas3 BCAS3 microtubule associated cell migration factor JBrowse link NW_004955451 1,929,857 2,450,225 RGD:9068941
G Bcl2l1 BCL2 like 1 JBrowse link NW_004955422 29,254,440 29,307,104 RGD:9068941
G Bik BCL2 interacting killer JBrowse link NW_004955413 28,277,727 28,294,032 RGD:9068941
G Birc2 baculoviral IAP repeat containing 2 JBrowse link NW_004955412 5,658,322 5,685,628 RGD:9068941
G Bmp4 bone morphogenetic protein 4 JBrowse link NW_004955409 9,432,835 9,439,680 RGD:9068941
G Bmp6 bone morphogenetic protein 6 JBrowse link NW_004955465 6,053,600 6,201,254 RGD:9068941
G Bmp7 bone morphogenetic protein 7 JBrowse link NW_004955445 2,154,057 2,235,594 RGD:9068941
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link NW_004955494 2,567,238 2,712,708 RGD:9068941
G Brca1 BRCA1 DNA repair associated JBrowse link NW_004955451 16,819,463 16,870,780 RGD:9068941
G Brca2 BRCA2 DNA repair associated JBrowse link NW_004955431 13,449,287 13,526,878 RGD:7240710
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link NW_004955451 2,705,834 2,820,610 RGD:7240710
RGD:9068941
G Btg2 BTG anti-proliferation factor 2 JBrowse link NW_004955406 39,303,221 39,307,308 RGD:9068941
G Btk Bruton tyrosine kinase JBrowse link NW_004955503 7,483,819 7,515,085 RGD:9068941
G Casp3 caspase 3 JBrowse link NW_004955403 24,315,712 24,326,271 RGD:9068941
G Casp7 caspase 7 JBrowse link NW_004955431 18,685,408 18,723,221 RGD:9068941
G Casp8 caspase 8 JBrowse link NW_004955403 322,082 348,591 RGD:7240710
G Casp9 caspase 9 JBrowse link NW_004955527 2,613,691 2,630,217 RGD:9068941
G Cav1 caveolin 1 JBrowse link NW_004955432 22,258,262 22,292,403 RGD:9068941
G Cbx7 chromobox 7 JBrowse link NW_004955413 25,079,627 25,100,039 RGD:9068941
G Ccnb1 cyclin B1 JBrowse link NW_004955446 140,661 149,500 RGD:9068941
G Ccne1 cyclin E1 JBrowse link NW_004955468 7,803,610 7,814,872 RGD:9068941
G Ccr6 C-C motif chemokine receptor 6 JBrowse link NW_004955439 14,921,524 14,949,493 RGD:9068941
G Cd55 CD55 molecule (Cromer blood group) JBrowse link NW_004955406 42,773,368 42,796,205 RGD:9068941
G Cdc25c cell division cycle 25C JBrowse link NW_004955418 2,114,053 2,138,513 RGD:9068941
G Cdh1 cadherin 1 JBrowse link NW_004955484 7,782,409 7,861,082 RGD:7240710
G Cdh13 cadherin 13 JBrowse link NW_004955564 407,120 1,549,880 RGD:9068941
G Cdk1 cyclin dependent kinase 1 JBrowse link NW_004955425 14,210,681 14,226,474 RGD:9068941
G Cdk2 cyclin dependent kinase 2 JBrowse link NW_004955458 3,555,603 3,561,063 RGD:9068941
G Cdk4 cyclin dependent kinase 4 JBrowse link NW_004955458 5,457,927 5,460,718 RGD:9068941
G Cdkn1b cyclin dependent kinase inhibitor 1B JBrowse link NW_004955413 9,615,542 9,620,542 RGD:9068941
G Cfb complement factor B JBrowse link NW_004955437 461,235 466,908 RGD:9068941
G Cga glycoprotein hormones, alpha polypeptide JBrowse link NW_004955411 14,092,743 14,168,297 RGD:9068941
G Chek2 checkpoint kinase 2 JBrowse link NW_004955455 2,969,113 3,008,004 RGD:7240710
RGD:9068941
G Chi3l1 chitinase 3 like 1 JBrowse link NW_004955406 39,195,101 39,201,808 RGD:9068941
G Clu clusterin JBrowse link NW_004955403 50,160,598 50,175,876 RGD:9068941
G Comt catechol-O-methyltransferase JBrowse link NW_004955442 18,130,282 18,152,153 RGD:9068941
G Csf1 colony stimulating factor 1 JBrowse link NW_004955435 13,404,236 13,423,059 RGD:9068941
G Csf1r colony stimulating factor 1 receptor JBrowse link NW_004955415 4,434,486 4,462,505 RGD:9068941
G Csnk2a1 casein kinase 2 alpha 1 JBrowse link NW_004955597 326,601 397,112 RGD:9068941
G Ctla4 cytotoxic T-lymphocyte associated protein 4 JBrowse link NW_004955457 11,028,707 11,034,898 RGD:9068941
G Ctsb cathepsin B JBrowse link NW_004955403 53,086,236 53,100,217 RGD:9068941
G Ctsd cathepsin D JBrowse link NW_004955422 13,576,315 13,584,267 RGD:9068941
G CUNH11orf65 chromosome unknown C11orf65 homolog JBrowse link NW_004955412 10,533,174 10,567,364 RGD:9068941
G Dusp1 dual specificity phosphatase 1 JBrowse link NW_004955408 25,481,294 25,484,381 RGD:9068941
G Dusp6 dual specificity phosphatase 6 JBrowse link NW_004955405 26,662,018 26,666,314 RGD:9068941
G Ebag9 estrogen receptor binding site associated antigen 9 JBrowse link NW_004955417 16,941,035 16,958,876 RGD:9068941
G Egfr epidermal growth factor receptor JBrowse link NW_004955456 321,222 456,431 RGD:9068941
G Egr1 early growth response 1 JBrowse link NW_004955418 2,001,509 2,005,269 RGD:9068941
G Eif3h eukaryotic translation initiation factor 3 subunit H JBrowse link NW_004955417 22,757,781 22,846,349 RGD:9068941
G Eng endoglin JBrowse link NW_004955419 818,797 853,319 RGD:9068941
G Epo erythropoietin JBrowse link NW_004955573 203,875 206,078 RGD:9068941
G Epor erythropoietin receptor JBrowse link NW_004955495 2,293,587 2,299,302 RGD:9068941
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link NW_004955451 14,442,816 14,456,009 RGD:9068941
G Erbb3 erb-b2 receptor tyrosine kinase 3 JBrowse link NW_004955458 3,683,126 3,701,752 RGD:9068941
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link NW_004955555 2,393,510 2,430,180 RGD:9068941
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit JBrowse link NW_004955555 2,355,005 2,369,599 RGD:9068941
G Esr1 estrogen receptor 1 JBrowse link NW_004955439 9,588,631 9,953,606 RGD:7240710
RGD:9068941
G Esr2 estrogen receptor 2 JBrowse link NW_004955466 5,587,003 5,644,765 RGD:9068941
G F10 coagulation factor X JBrowse link NW_004955404 666,142 682,598 RGD:9068941
G F11r F11 receptor JBrowse link NW_004955468 12,764,968 12,785,956 RGD:9068941
G F5 coagulation factor V JBrowse link NW_004955462 7,695,004 7,757,832 RGD:9068941
G F7 coagulation factor VII JBrowse link NW_004955404 685,170 692,797 RGD:9068941
G Fanca FA complementation group A JBrowse link NW_004955541 3,272,936 3,320,229 RGD:9068941
G Fancb FA complementation group B JBrowse link NW_004955519 3,337,138 3,364,963 RGD:9068941
G Fancc FA complementation group C JBrowse link NW_004955422 22,031,825 22,246,478 RGD:9068941
G Fancd2 FA complementation group D2 JBrowse link NW_004955561 1,460,080 1,538,026 RGD:9068941
G Fanci FA complementation group I JBrowse link NW_004955416 15,788,812 15,857,933 RGD:9068941
G Fas Fas cell surface death receptor JBrowse link NW_004955425 3,961,671 3,987,513 RGD:9068941
G Fbxw7 F-box and WD repeat domain containing 7 JBrowse link NW_004955471 6,852,459 7,026,590 RGD:9068941
G Fen1 flap structure-specific endonuclease 1 JBrowse link NW_004955511 5,918,667 5,922,506 RGD:9068941
G Fgf2 fibroblast growth factor 2 JBrowse link NW_004955428 17,840,554 17,894,779 RGD:9068941
G Fgf8 fibroblast growth factor 8 JBrowse link NW_004955485 8,517,412 8,521,732 RGD:9068941
G Fgfr2 fibroblast growth factor receptor 2 JBrowse link NW_004955551 2,321,190 2,427,000 RGD:9068941
G Fgfr3 fibroblast growth factor receptor 3 JBrowse link NW_004955514 1,030,244 1,038,590 RGD:9068941
G Fgfr4 fibroblast growth factor receptor 4 JBrowse link NW_004955408 29,370,480 29,383,531 RGD:9068941
G Flt1 fms related receptor tyrosine kinase 1 JBrowse link NW_004955497 7,653,309 7,831,737 RGD:9068941
G Ghr growth hormone receptor JBrowse link NW_004955426 26,553,509 26,873,619 RGD:9068941
G Ghrh growth hormone releasing hormone JBrowse link NW_004955422 24,481,246 24,490,529 RGD:9068941
G Gnrh1 gonadotropin releasing hormone 1 JBrowse link NW_004955403 48,341,731 48,346,595 RGD:9068941
G Grb2 growth factor receptor bound protein 2 JBrowse link NW_004955553 2,186,590 2,258,964 RGD:9068941
G Gstp1 glutathione S-transferase pi 1 JBrowse link NW_004955422 17,914,228 17,916,918 RGD:9068941
G Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 JBrowse link NW_004955533 1,304,675 1,489,041 RGD:9068941
G Hfe homeostatic iron regulator JBrowse link NW_004955483 933,269 941,070 RGD:9068941
G Hmmr hyaluronan mediated motility receptor JBrowse link NW_004955408 16,865,066 16,895,918 RGD:7240710
G Hras HRas proto-oncogene, GTPase JBrowse link NW_004955476 11,508,446 11,510,333 RGD:9068941
G Icam1 intercellular adhesion molecule 1 JBrowse link NW_004955495 1,561,464 1,573,282 RGD:9068941
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 JBrowse link NW_004955457 6,851,542 6,869,452 RGD:9068941
G Ifng interferon gamma JBrowse link NW_004955458 14,643,333 14,648,020 RGD:9068941
G Igf1 insulin like growth factor 1 JBrowse link NW_004955405 37,505,830 37,582,152 RGD:9068941
G Igf1r insulin like growth factor 1 receptor JBrowse link NW_004955416 26,101,090 26,382,660 RGD:9068941
G Igf2 insulin like growth factor 2 JBrowse link NW_004955422 13,880,525 13,907,963 RGD:9068941
G Igfbp1 insulin like growth factor binding protein 1 JBrowse link NW_004955456 6,810,461 6,814,944 RGD:9068941
G Igfbp3 insulin like growth factor binding protein 3 JBrowse link NW_004955456 6,795,560 6,802,147 RGD:9068941
G Igfbp6 insulin like growth factor binding protein 6 JBrowse link NW_004955458 377,929 382,109 RGD:9068941
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta JBrowse link NW_004955536 611,965 658,647 RGD:9068941
G Il13ra2 interleukin 13 receptor subunit alpha 2 JBrowse link NW_004955490 708,144 758,195 RGD:9068941
G Il18 interleukin 18 JBrowse link NW_004955412 13,807,361 13,826,007 RGD:9068941
G Il1b interleukin 1 beta JBrowse link NW_004955470 1,486,936 1,491,888 RGD:9068941
G Il6 interleukin 6 JBrowse link NW_004955410 25,079,835 25,084,390 RGD:9068941
G Insr insulin receptor JBrowse link NW_004955563 1,867,400 2,011,845 RGD:9068941
G Itga1 integrin subunit alpha 1 JBrowse link NW_004955446 14,439,571 14,582,236 RGD:9068941
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link NW_004955464 1,107,598 1,110,326 RGD:9068941
G Kat2b lysine acetyltransferase 2B JBrowse link NW_004955430 12,109,493 12,196,102 RGD:9068941
G Kat5 lysine acetyltransferase 5 JBrowse link NW_004955422 19,557,498 19,565,044 RGD:9068941
G Kat7 lysine acetyltransferase 7 JBrowse link NW_004955451 11,770,201 11,802,992 RGD:9068941
G Kdm1a lysine demethylase 1A JBrowse link NW_004955452 3,044,042 3,104,650 RGD:9068941
G Kdm3b lysine demethylase 3B JBrowse link NW_004955418 2,026,254 2,098,223 RGD:9068941
G Kdm4a lysine demethylase 4A JBrowse link NW_004955537 3,199,394 3,255,945 RGD:9068941
G Kdm4b lysine demethylase 4B JBrowse link NW_004955495 4,019,066 4,101,577 RGD:9068941
G Kdm4c lysine demethylase 4C JBrowse link NW_004955434 10,646,524 11,000,589 RGD:9068941
G Kdm5a lysine demethylase 5A JBrowse link NW_004955454 6,774,308 6,865,047 RGD:9068941
G Kdm5b lysine demethylase 5B JBrowse link NW_004955406 38,755,220 38,823,094 RGD:9068941
G Kdm5c lysine demethylase 5C JBrowse link NW_004955475 243,666 278,064 RGD:9068941
G Kdm6a lysine demethylase 6A JBrowse link NW_004955516 3,151,350 3,346,832 RGD:9068941
G Kdm8 lysine demethylase 8 JBrowse link NW_004955493 5,437,344 5,462,849 RGD:9068941
G Kdr kinase insert domain receptor JBrowse link NW_004955447 15,810,816 15,851,702 RGD:9068941
G Kiss1r KISS1 receptor JBrowse link NW_004955495 6,918,632 6,921,891 RGD:9068941
G Klc1 kinesin light chain 1 JBrowse link NW_004955538 2,462,491 2,503,398 RGD:9068941
G Kmt2b lysine methyltransferase 2B JBrowse link NW_004955468 2,813,183 2,834,326 RGD:9068941
G Kmt2d lysine methyltransferase 2D JBrowse link NW_004955500 7,850,782 7,891,703 RGD:9068941
G Kmt2e lysine methyltransferase 2E (inactive) JBrowse link NW_004955410 9,714,587 9,808,021 RGD:9068941
G Kras KRAS proto-oncogene, GTPase JBrowse link NW_004955413 20,298,852 20,328,756 RGD:7240710
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 JBrowse link NW_004955445 13,621,007 13,645,809 RGD:9068941
G Lep leptin JBrowse link NW_004955479 9,266,604 9,276,568 RGD:9068941
G Letmd1 LETM1 domain containing 1 JBrowse link NW_004955547 1,574,210 1,586,432 RGD:9068941
G Lhcgr luteinizing hormone/choriogonadotropin receptor JBrowse link NW_004955441 15,205,883 15,263,617 RGD:9068941
G Lnpep leucyl and cystinyl aminopeptidase JBrowse link NW_004955418 15,631,703 15,718,711 RGD:9068941
G LOC102009223 cytochrome P450 1B1 JBrowse link NW_004955441 5,803,397 5,812,131 RGD:9068941
G LOC102010322 cytochrome P450 1A2 JBrowse link NW_004955450 3,165,107 3,171,894 RGD:9068941
G LOC102010850 cytochrome P450 1A1 JBrowse link NW_004955450 3,183,958 3,189,488 RGD:9068941
G LOC102011010 steroid 17-alpha-hydroxylase/17,20 lyase JBrowse link NW_004955485 7,615,132 7,652,899 RGD:9068941
G LOC102012303 NADH-cytochrome b5 reductase 3 JBrowse link NW_004955413 27,971,140 27,979,905 RGD:9068941
G LOC102023780 aromatase JBrowse link NW_004955409 3,198,622 3,313,072 RGD:9068941
G Lrrc56 leucine rich repeat containing 56 JBrowse link NW_004955476 11,493,299 11,507,022 RGD:9068941
G Lta lymphotoxin alpha JBrowse link NW_004955437 114,216 116,003 RGD:9068941
G Manf mesencephalic astrocyte derived neurotrophic factor JBrowse link NW_004955532 3,075,195 3,077,505 RGD:9068941
G Map2k1 mitogen-activated protein kinase kinase 1 JBrowse link NW_004955450 9,181,851 9,205,277 RGD:9068941
G Map2k2 mitogen-activated protein kinase kinase 2 JBrowse link NW_004955495 4,695,239 4,718,380 RGD:9068941
G Map2k3 mitogen-activated protein kinase kinase 3 JBrowse link NW_004955577 1,225,033 1,249,510 RGD:9068941
G Map3k1 mitogen-activated protein kinase kinase kinase 1 JBrowse link NW_004955446 11,022,091 11,090,136 RGD:9068941
G Mapk1 mitogen-activated protein kinase 1 JBrowse link NW_004955442 17,284,232 17,380,026 RGD:9068941
G Mapk15 mitogen-activated protein kinase 15 JBrowse link NW_004955454 2,413,393 2,420,703 RGD:9068941
G Mapt microtubule associated protein tau JBrowse link NW_004955478 10,222,439 10,271,439 RGD:9068941
G Mcph1 microcephalin 1 JBrowse link NW_004955403 54,143,454 54,273,201 RGD:9068941
G Mdm2 MDM2 proto-oncogene JBrowse link NW_004955458 15,264,028 15,287,290 RGD:9068941
G Med12 mediator complex subunit 12 JBrowse link NW_004955475 10,687,168 10,710,286 RGD:9068941
G Mgmt O-6-methylguanine-DNA methyltransferase JBrowse link NW_004955477 7,103,035 7,375,073 RGD:9068941
G Mki67 marker of proliferation Ki-67 JBrowse link NW_004955477 5,847,288 5,875,970 RGD:9068941
G Mmp8 matrix metallopeptidase 8 JBrowse link NW_004955412 5,928,997 5,939,012 RGD:9068941
G Msh2 mutS homolog 2 JBrowse link NW_004955441 14,188,315 14,247,608 RGD:9068941
G Mtor mechanistic target of rapamycin kinase JBrowse link NW_004955486 2,487,642 2,599,694 RGD:9068941
G Muc1 mucin 1, cell surface associated JBrowse link NW_004955545 1,657,728 1,662,112 RGD:9068941
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link NW_004955461 2,714,022 2,718,872 RGD:9068941
G Nbn nibrin JBrowse link NW_004955417 6,840,916 6,880,479 RGD:9068941
G Ncoa3 nuclear receptor coactivator 3 JBrowse link NW_004955445 10,020,916 10,085,318 RGD:9068941
G Ncoa6 nuclear receptor coactivator 6 JBrowse link NW_004955422 26,564,535 26,639,516 RGD:9068941
G Ncor2 nuclear receptor corepressor 2 JBrowse link NW_004955482 4,927,482 5,031,848 RGD:9068941
G Nfkb1 nuclear factor kappa B subunit 1 JBrowse link NW_004955496 5,842,734 5,950,995 RGD:9068941
G Nod2 nucleotide binding oligomerization domain containing 2 JBrowse link NW_004955433 8,746,213 8,780,119 RGD:9068941
G Nos3 nitric oxide synthase 3 JBrowse link NW_004955491 5,438,228 5,457,308 RGD:9068941
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link NW_004955484 7,012,373 7,028,182 RGD:9068941
G Nqo2 N-ribosyldihydronicotinamide:quinone reductase 2 JBrowse link NW_004955465 10,186,928 10,200,098 RGD:7240710
G Nuf2 NUF2 component of NDC80 kinetochore complex JBrowse link NW_004955462 13,082,874 13,142,709 RGD:9068941
G Ogg1 8-oxoguanine DNA glycosylase JBrowse link NW_004955561 1,277,362 1,282,949 RGD:9068941
G Pak1 p21 (RAC1) activated kinase 1 JBrowse link NW_004955414 14,365,325 14,447,470 RGD:9068941
G Palb2 partner and localizer of BRCA2 JBrowse link NW_004955493 2,149,053 2,175,482 RGD:7240710
G Pdgfa platelet derived growth factor subunit A JBrowse link NW_004955460 8,328,400 8,346,755 RGD:9068941
G Pdgfrb platelet derived growth factor receptor beta JBrowse link NW_004955415 4,365,848 4,403,317 RGD:9068941
G Pgf placental growth factor JBrowse link NW_004955523 616,196 627,055 RGD:9068941
G Phb prohibitin JBrowse link NW_004955451 12,110,290 12,119,870 RGD:7240710
RGD:9068941
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha JBrowse link NW_004955420 8,355,415 8,427,024 RGD:7240710
G Plau plasminogen activator, urokinase JBrowse link NW_004955437 17,995,726 18,000,542 RGD:9068941
G Plcg1 phospholipase C gamma 1 JBrowse link NW_004955445 15,787,496 15,823,859 RGD:9068941
G Plpp4 phospholipid phosphatase 4 JBrowse link NW_004955551 1,328,652 1,458,714 RGD:9068941
G Pmepa1 prostate transmembrane protein, androgen induced 1 JBrowse link NW_004955445 1,837,084 1,847,214 RGD:9068941
G Pms2 PMS1 homolog 2, mismatch repair system component JBrowse link NW_004955460 13,762,854 13,791,462 RGD:9068941
G Pole DNA polymerase epsilon, catalytic subunit JBrowse link NW_004955482 373,467 418,000 RGD:9068941
G Pon1 paraoxonase 1 JBrowse link NW_004955432 11,893,473 11,923,035 RGD:9068941
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent 1D JBrowse link NW_004955451 1,878,110 1,915,794 RGD:7240710
G Ppp2r1a protein phosphatase 2 scaffold subunit Aalpha JBrowse link NW_004955558 381,794 410,485 RGD:9068941
G Ppp2r2b protein phosphatase 2 regulatory subunit Bbeta JBrowse link NW_004955415 7,054,296 7,510,179 RGD:9068941
G Prame PRAME nuclear receptor transcriptional regulator JBrowse link NW_004955455 6,921,420 6,930,453 RGD:9068941
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 JBrowse link NW_004955426 25,079,718 25,102,090 RGD:9068941
G Psen2 presenilin 2 JBrowse link NW_004955406 5,727,367 5,748,798 RGD:9068941
G Pten phosphatase and tensin homolog JBrowse link NW_004955425 5,007,811 5,091,829 RGD:9068941
G Ptges3 prostaglandin E synthase 3 JBrowse link NW_004955458 4,203,075 4,209,967 RGD:9068941
G Ptgs1 prostaglandin-endoperoxide synthase 1 JBrowse link NW_004955419 5,678,750 5,699,305 RGD:9068941
G Ptk2b protein tyrosine kinase 2 beta JBrowse link NW_004955403 49,856,056 49,970,800 RGD:9068941
G Rad51 RAD51 recombinase JBrowse link NW_004955416 7,566,715 7,590,628 RGD:7240710
RGD:9068941
G Rad54l RAD54 like JBrowse link NW_004955464 11,996,512 12,033,525 RGD:7240710
G Rassf1 Ras association domain family member 1 JBrowse link NW_004955532 2,132,892 2,142,106 RGD:9068941
G Rb1cc1 RB1 inducible coiled-coil 1 JBrowse link NW_004955454 12,201,566 12,257,383 RGD:7240710
G Rel REL proto-oncogene, NF-kB subunit JBrowse link NW_004955424 22,909,035 22,939,651 RGD:9068941
G Relb RELB proto-oncogene, NF-kB subunit JBrowse link NW_004955555 2,060,533 2,086,229 RGD:9068941
G Rerg RAS like estrogen regulated growth inhibitor JBrowse link NW_004955413 11,825,235 11,940,390 RGD:9068941
G Rhoa ras homolog family member A JBrowse link NW_004955532 1,300,821 1,347,453 RGD:9068941
G Rhob ras homolog family member B JBrowse link NW_004955469 2,964,968 2,966,998 RGD:9068941
G Rhoc ras homolog family member C JBrowse link NW_004955435 16,115,095 16,117,736 RGD:9068941
G Rnasel ribonuclease L JBrowse link NW_004955406 21,413,950 21,424,860 RGD:9068941
G Rnf20 ring finger protein 20 JBrowse link NW_004955419 24,273,714 24,299,454 RGD:9068941
G Rock1 Rho associated coiled-coil containing protein kinase 1 JBrowse link NW_004955402 9,752,101 9,864,317 RGD:9068941
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004955452 4,580,444 4,606,820 RGD:9068941
G Serpine1 serpin family E member 1 JBrowse link NW_004955456 16,147,523 16,157,040 RGD:9068941
G Sf3b1 splicing factor 3b subunit 1 JBrowse link NW_004955403 3,134,960 3,163,395 RGD:9068941
G Sf3b2 splicing factor 3b subunit 2 JBrowse link NW_004955422 19,242,041 19,266,479 RGD:9068941
G Shmt1 serine hydroxymethyltransferase 1 JBrowse link NW_004955478 10,972,791 11,001,535 RGD:9068941
G Six1 SIX homeobox 1 JBrowse link NW_004955466 8,961,597 8,966,069 RGD:9068941
G Skp2 S-phase kinase associated protein 2 JBrowse link NW_004955426 20,972,663 20,999,769 RGD:9068941
G Slc22a18 solute carrier family 22 member 18 JBrowse link NW_004955422 14,590,588 14,615,898 RGD:7240710
G Slx4 SLX4 structure-specific endonuclease subunit JBrowse link NW_004955442 13,765,660 13,792,106 RGD:9068941
G Smad4 SMAD family member 4 JBrowse link NW_004955402 35,956,080 36,001,746 RGD:9068941
G Sncg synuclein gamma JBrowse link NW_004955510 5,958,276 5,961,719 RGD:9068941
G Snw1 SNW domain containing 1 JBrowse link NW_004955438 1,561,562 1,601,492 RGD:9068941
G Sod2 superoxide dismutase 2 JBrowse link NW_004955439 21,209,101 21,223,538 RGD:9068941
G Sox2 SRY-box transcription factor 2 JBrowse link NW_004955420 10,671,888 10,674,080 RGD:9068941
G Spint1 serine peptidase inhibitor, Kunitz type 1 JBrowse link NW_004955416 7,715,536 7,728,759 RGD:9068941
G Srsf5 serine and arginine rich splicing factor 5 JBrowse link NW_004955466 612,221 617,087 RGD:9068941
G Stat1 signal transducer and activator of transcription 1 JBrowse link NW_004955403 8,156,660 8,192,018 RGD:9068941
G Stat3 signal transducer and activator of transcription 3 JBrowse link NW_004955451 16,320,326 16,348,505 RGD:9068941
G Stk11 serine/threonine kinase 11 JBrowse link NW_004955495 6,678,195 6,699,408 RGD:9068941
G Terf1 telomeric repeat binding factor 1 JBrowse link NW_004955444 7,103,282 7,149,450 RGD:9068941
G Tfrc transferrin receptor JBrowse link NW_004955420 12,348,392 12,372,714 RGD:9068941
G Tgfb1 transforming growth factor beta 1 JBrowse link NW_004955555 274,405 288,441 RGD:9068941
G Thra thyroid hormone receptor alpha JBrowse link NW_004955451 14,731,746 14,743,545 RGD:9068941
G Thrb thyroid hormone receptor beta JBrowse link NW_004955430 15,992,146 16,322,696 RGD:9068941
G Timp1 TIMP metallopeptidase inhibitor 1 JBrowse link NW_004955516 507,113 511,360 RGD:9068941
G Timp3 TIMP metallopeptidase inhibitor 3 JBrowse link NW_004955405 41,613,976 41,655,813 RGD:9068941
G Tk1 thymidine kinase 1 JBrowse link NW_004955506 4,379,830 4,390,729 RGD:9068941
G Tlr2 toll like receptor 2 JBrowse link NW_004955471 8,011,710 8,019,063 RGD:9068941
G Tlr4 toll like receptor 4 JBrowse link NW_004955419 10,190,937 10,201,896 RGD:9068941
G Tlr9 toll like receptor 9 JBrowse link NW_004955532 3,828,645 3,832,699 RGD:9068941
G Tnf tumor necrosis factor JBrowse link NW_004955437 117,267 119,899 RGD:9068941
G Tp53 tumor protein p53 JBrowse link NW_004955467 9,241,391 9,256,716 RGD:7240710
G Tp73 tumor protein p73 JBrowse link NW_004955486 7,914,608 7,961,992 RGD:9068941
G Tsc1 TSC complex subunit 1 JBrowse link NW_004955513 2,197,037 2,244,992 RGD:9068941
G Tsc2 TSC complex subunit 2 JBrowse link NW_004955442 15,178,356 15,216,978 RGD:9068941
G Tsg101 tumor susceptibility 101 JBrowse link NW_004955414 33,154,812 33,193,769 RGD:9068941
G Tshr thyroid stimulating hormone receptor JBrowse link NW_004955438 4,601,765 4,758,922 RGD:9068941
G Tut4 terminal uridylyl transferase 4 JBrowse link NW_004955464 6,610,350 6,734,606 RGD:9068941
G Urod uroporphyrinogen decarboxylase JBrowse link NW_004955464 13,226,271 13,228,908 RGD:9068941
G Vdr vitamin D receptor JBrowse link NW_004955500 6,745,725 6,798,052 RGD:9068941
G Wif1 WNT inhibitory factor 1 JBrowse link NW_004955458 11,755,147 11,834,047 RGD:9068941
G Wnt2 Wnt family member 2 JBrowse link NW_004955432 22,988,208 23,024,530 RGD:9068941
G Wnt7b Wnt family member 7B JBrowse link NW_004955413 30,146,185 30,185,693 RGD:9068941
G Wnt9a Wnt family member 9A JBrowse link NW_004955581 422,028 438,321 RGD:9068941
G Wrap53 WD repeat containing antisense to TP53 JBrowse link NW_004955467 9,225,506 9,240,756 RGD:9068941
G Wrn WRN RecQ like helicase JBrowse link NW_004955463 7,495,243 7,633,532 RGD:9068941
G Wt1 WT1 transcription factor JBrowse link NW_004955476 10,464,688 10,504,473 RGD:9068941
G Xiap X-linked inhibitor of apoptosis JBrowse link NW_004955473 10,823,795 10,878,256 RGD:9068941
G Xpo1 exportin 1 JBrowse link NW_004955424 22,370,006 22,420,568 RGD:9068941
G Xpo5 exportin 5 JBrowse link NW_004955437 9,351,045 9,392,396 RGD:9068941
G Xrcc3 X-ray repair cross complementing 3 JBrowse link NW_004955538 2,499,297 2,511,898 RGD:7240710
bilateral breast cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ATM serine/threonine kinase JBrowse link NW_004955412 10,422,753 10,531,406 RGD:9068941
G Brca1 BRCA1 DNA repair associated JBrowse link NW_004955451 16,819,463 16,870,780 RGD:9068941
G Brca2 BRCA2 DNA repair associated JBrowse link NW_004955431 13,449,287 13,526,878 RGD:9068941
G Msh6 mutS homolog 6 JBrowse link NW_004955441 14,451,207 14,471,316 RGD:9068941
G Palb2 partner and localizer of BRCA2 JBrowse link NW_004955493 2,149,053 2,175,482 RGD:9068941
G Sdhb succinate dehydrogenase complex iron sulfur subunit B JBrowse link NW_004955527 1,769,280 1,792,496 RGD:9068941
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 JBrowse link NW_004955495 2,021,671 2,105,155 RGD:9068941
breast adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt1 AKT serine/threonine kinase 1 JBrowse link NW_004955538 3,208,711 3,224,386 RGD:9068941
G Cat catalase JBrowse link NW_004955422 11,783,973 11,826,970 RGD:9068941
G Ccne1 cyclin E1 JBrowse link NW_004955468 7,803,610 7,814,872 RGD:9068941
G Fgfr3 fibroblast growth factor receptor 3 JBrowse link NW_004955514 1,030,244 1,038,590 RGD:9068941
G Kras KRAS proto-oncogene, GTPase JBrowse link NW_004955413 20,298,852 20,328,756 RGD:9068941
G LOC102009223 cytochrome P450 1B1 JBrowse link NW_004955441 5,803,397 5,812,131 RGD:9068941
G Muc1 mucin 1, cell surface associated JBrowse link NW_004955545 1,657,728 1,662,112 RGD:9068941
G Mxi1 MAX interactor 1, dimerization protein JBrowse link NW_004955485 1,088,175 1,156,521 RGD:9068941
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha JBrowse link NW_004955420 8,355,415 8,427,024 RGD:9068941
G Rb1cc1 RB1 inducible coiled-coil 1 JBrowse link NW_004955454 12,201,566 12,257,383 RGD:9068941
G Slc22a18 solute carrier family 22 member 18 JBrowse link NW_004955422 14,590,588 14,615,898 RGD:9068941
G Tnf tumor necrosis factor JBrowse link NW_004955437 117,267 119,899 RGD:9068941
G Tp53 tumor protein p53 JBrowse link NW_004955467 9,241,391 9,256,716 RGD:9068941
Breast Cancer, Familial term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca12 ATP binding cassette subfamily A member 12 JBrowse link NW_004955457 885,941 1,062,713 RGD:9068941
G Abcc1 ATP binding cassette subfamily C member 1 JBrowse link NW_004955442 729,322 858,826 RGD:9068941
G Ankrd30a ankyrin repeat domain 30A JBrowse link NW_004955546 798,445 890,288 RGD:9068941
G Ap1b1 adaptor related protein complex 1 subunit beta 1 JBrowse link NW_004955455 3,632,053 3,686,007 RGD:9068941
G Apc APC regulator of WNT signaling pathway JBrowse link NW_004955418 2,567,804 2,675,062 RGD:9068941
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase JBrowse link NW_004955457 704,213 729,702 RGD:9068941
G Atm ATM serine/threonine kinase JBrowse link NW_004955412 10,422,753 10,531,406 RGD:9068941
G Atr ATR serine/threonine kinase JBrowse link NW_004955508 3,337,036 3,440,313 RGD:9068941
G Bard1 BRCA1 associated RING domain 1 JBrowse link NW_004955457 1,187,942 1,258,475 RGD:9068941
G Brca1 BRCA1 DNA repair associated JBrowse link NW_004955451 16,819,463 16,870,780 RGD:9068941
G Brca2 BRCA2 DNA repair associated JBrowse link NW_004955431 13,449,287 13,526,878 RGD:9068941
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link NW_004955451 2,705,834 2,820,610 RGD:9068941
G Ccdc117 coiled-coil domain containing 117 JBrowse link NW_004955455 3,019,373 3,034,891 RGD:9068941
G Cdh1 cadherin 1 JBrowse link NW_004955484 7,782,409 7,861,082 RGD:9068941
G Chek2 checkpoint kinase 2 JBrowse link NW_004955455 2,969,113 3,008,004 RGD:9068941
G CUNH11orf65 chromosome unknown C11orf65 homolog JBrowse link NW_004955412 10,533,174 10,567,364 RGD:9068941
G Dctn5 dynactin subunit 5 JBrowse link NW_004955493 2,175,585 2,204,742 RGD:9068941
G Emid1 EMI domain containing 1 JBrowse link NW_004955455 3,514,350 3,564,584 RGD:9068941
G Esr1 estrogen receptor 1 JBrowse link NW_004955439 9,588,631 9,953,606 RGD:9068941
G Ewsr1 EWS RNA binding protein 1 JBrowse link NW_004955455 3,571,025 3,599,975 RGD:9068941
G Gas2l1 growth arrest specific 2 like 1 JBrowse link NW_004955455 3,613,092 3,618,476 RGD:9068941
G Hscb HscB mitochondrial iron-sulfur cluster cochaperone JBrowse link NW_004955455 3,005,617 3,013,393 RGD:9068941
G Kras KRAS proto-oncogene, GTPase JBrowse link NW_004955413 20,298,852 20,328,756 RGD:9068941
G Kremen1 kringle containing transmembrane protein 1 JBrowse link NW_004955455 3,308,740 3,368,690 RGD:9068941
G LOC102024977 chromosome unknown open reading frame, human C22orf31 JBrowse link NW_004955455 3,290,397 3,302,619 RGD:9068941
G Mlh1 mutL homolog 1 JBrowse link NW_004955421 3,890,291 3,936,892 RGD:9068941
G Mutyh mutY DNA glycosylase JBrowse link NW_004955464 12,927,669 12,936,894 RGD:9068941
G Nbn nibrin JBrowse link NW_004955417 6,840,916 6,880,479 RGD:9068941
G Ncor1 nuclear receptor corepressor 1 JBrowse link NW_004955467 1,408,292 1,568,539 RGD:9068941
G Nefh neurofilament heavy JBrowse link NW_004955455 3,735,330 3,744,714 RGD:9068941
G Nf2 neurofibromin 2 JBrowse link NW_004955455 3,862,804 3,950,669 RGD:9068941
G Nipsnap1 nipsnap homolog 1 JBrowse link NW_004955455 3,796,445 3,815,290 RGD:9068941
G Nobox NOBOX oogenesis homeobox JBrowse link NW_004955491 575,413 580,460 RGD:9068941
G Palb2 partner and localizer of BRCA2 JBrowse link NW_004955493 2,149,053 2,175,482 RGD:9068941
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha JBrowse link NW_004955420 8,355,415 8,427,024 RGD:9068941
G Pms2 PMS1 homolog 2, mismatch repair system component JBrowse link NW_004955460 13,762,854 13,791,462 RGD:9068941
G Prc1 protein regulator of cytokinesis 1 JBrowse link NW_004955416 15,023,620 15,045,958 RGD:9068941
G Rad50 RAD50 double strand break repair protein JBrowse link NW_004955408 3,953,801 4,035,494 RGD:9068941
G Rad51 RAD51 recombinase JBrowse link NW_004955416 7,566,715 7,590,628 RGD:9068941
G Rad51c RAD51 paralog C JBrowse link NW_004955451 4,053,195 4,178,226 RGD:9068941
G Rasl10a RAS like family 10 member A JBrowse link NW_004955455 3,618,656 3,621,299 RGD:9068941
G Ret ret proto-oncogene JBrowse link NW_004955546 1,221,995 1,252,147 RGD:9068941
G Rhbdd3 rhomboid domain containing 3 JBrowse link NW_004955455 3,564,867 3,570,910 RGD:9068941
G Tet2 tet methylcytosine dioxygenase 2 JBrowse link NW_004955496 3,885,684 3,963,056 RGD:9068941
G Thoc5 THO complex 5 JBrowse link NW_004955455 3,761,933 3,795,517 RGD:9068941
G Tp53 tumor protein p53 JBrowse link NW_004955467 9,241,391 9,256,716 RGD:9068941
G Tsg101 tumor susceptibility 101 JBrowse link NW_004955414 33,154,812 33,193,769 RGD:9068941
G Xbp1 X-box binding protein 1 JBrowse link NW_004955455 3,037,885 3,041,827 RGD:9068941
G Znrf3 zinc and ring finger 3 JBrowse link NW_004955455 3,066,957 3,289,836 RGD:9068941
breast carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abce1 ATP binding cassette subfamily E member 1 JBrowse link NW_004955428 1,029,909 1,058,902 RGD:9068941
G Abcg2 ATP binding cassette subfamily G member 2 (Junior blood group) JBrowse link NW_004955474 12,365,903 12,408,715 RGD:9068941
G Afdn afadin, adherens junction formation factor JBrowse link NW_004955439 14,324,910 14,428,846 RGD:9068941
G Amacr alpha-methylacyl-CoA racemase JBrowse link NW_004955426 19,570,179 19,580,920 RGD:9068941
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 JBrowse link NW_004955550 1,273,170 1,275,843 RGD:9068941
G Atm ATM serine/threonine kinase JBrowse link NW_004955412 10,422,753 10,531,406 RGD:9068941
G Atp7b ATPase copper transporting beta JBrowse link NW_004955431 5,228,395 5,297,120 RGD:9068941
G Bcl2l1 BCL2 like 1 JBrowse link NW_004955422 29,254,440 29,307,104 RGD:9068941
G Bin1 bridging integrator 1 JBrowse link NW_004955459 3,376,149 3,423,157 RGD:9068941
G Brca1 BRCA1 DNA repair associated JBrowse link NW_004955451 16,819,463 16,870,780 RGD:9068941
G Brca2 BRCA2 DNA repair associated JBrowse link NW_004955431 13,449,287 13,526,878 RGD:9068941
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link NW_004955451 2,705,834 2,820,610 RGD:9068941
G Ca9 carbonic anhydrase 9 JBrowse link NW_004955472 619,084 625,570 RGD:9068941
G Cadm1 cell adhesion molecule 1 JBrowse link NW_004955412 16,673,401 17,005,082 RGD:9068941
G Casp3 caspase 3 JBrowse link NW_004955403 24,315,712 24,326,271 RGD:9068941
G Cav1 caveolin 1 JBrowse link NW_004955432 22,258,262 22,292,403 RGD:9068941
G Cbx7 chromobox 7 JBrowse link NW_004955413 25,079,627 25,100,039 RGD:9068941
G Cd46 CD46 molecule JBrowse link NW_004955406 43,002,817 43,034,555 RGD:9068941
G Cd59 CD59 molecule (CD59 blood group) JBrowse link NW_004955422 12,500,572 12,528,738 RGD:9068941
G Cd82 CD82 molecule JBrowse link NW_004955422 3,035,887 3,069,298 RGD:9068941
G Cd9 CD9 molecule JBrowse link NW_004955413 3,891,874 3,924,065 RGD:9068941
G Cdc25a cell division cycle 25A JBrowse link NW_004955420 24,345,002 24,361,802 RGD:9068941
G Cdc25b cell division cycle 25B JBrowse link NW_004955415 14,637,295 14,647,181 RGD:9068941
G Cdh1 cadherin 1 JBrowse link NW_004955484 7,782,409 7,861,082 RGD:9068941
G Cdh13 cadherin 13 JBrowse link NW_004955564 407,120 1,549,880 RGD:9068941
G Cdk4 cyclin dependent kinase 4 JBrowse link NW_004955458 5,457,927 5,460,718 RGD:9068941
G Cxcl12 C-X-C motif chemokine ligand 12 JBrowse link NW_004955546 1,929,269 1,941,690 RGD:9068941
G Dcn decorin JBrowse link NW_004955405 28,335,493 28,371,912 RGD:9068941
G Egfr epidermal growth factor receptor JBrowse link NW_004955456 321,222 456,431 RGD:9068941
G Eno2 enolase 2 JBrowse link NW_004955413 4,498,625 4,506,769 RGD:9068941
G Ep300 E1A binding protein p300 JBrowse link NW_004955413 26,647,553 26,727,875 RGD:9068941
G Esr1 estrogen receptor 1 JBrowse link NW_004955439 9,588,631 9,953,606 RGD:9068941
G Fas Fas cell surface death receptor JBrowse link NW_004955425 3,961,671 3,987,513 RGD:9068941
G Fgf2 fibroblast growth factor 2 JBrowse link NW_004955428 17,840,554 17,894,779 RGD:9068941
G Fzd2 frizzled class receptor 2 JBrowse link NW_004955451 17,501,410 17,503,726 RGD:9068941
G Hdac1 histone deacetylase 1 JBrowse link NW_004955452 10,636,366 10,668,873 RGD:9068941
G Igf2r insulin like growth factor 2 receptor JBrowse link NW_004955439 20,754,915 20,874,759 RGD:9068941
G Kdm6b lysine demethylase 6B JBrowse link NW_004955467 9,085,239 9,106,658 RGD:9068941
G Kdr kinase insert domain receptor JBrowse link NW_004955447 15,810,816 15,851,702 RGD:9068941
G Klk6 kallikrein related peptidase 6 JBrowse link NW_004955558 1,501,806 1,509,461 RGD:9068941
G Mdc1 mediator of DNA damage checkpoint 1 JBrowse link NW_004955583 688,288 722,393 RGD:9068941
G Mlh3 mutL homolog 3 JBrowse link NW_004955523 515,409 547,257 RGD:9068941
G Mmp14 matrix metallopeptidase 14 JBrowse link NW_004955409 37,438,924 37,448,704 RGD:9068941
G Msh2 mutS homolog 2 JBrowse link NW_004955441 14,188,315 14,247,608 RGD:9068941
G Msh6 mutS homolog 6 JBrowse link NW_004955441 14,451,207 14,471,316 RGD:9068941
G Mtus1 microtubule associated scaffold protein 1 JBrowse link NW_004955552 1,867,477 2,040,659 RGD:9068941
G Ncoa1 nuclear receptor coactivator 1 JBrowse link NW_004955469 6,676,780 6,892,587 RGD:9068941
G Ncoa3 nuclear receptor coactivator 3 JBrowse link NW_004955445 10,020,916 10,085,318 RGD:9068941
G Nqo2 N-ribosyldihydronicotinamide:quinone reductase 2 JBrowse link NW_004955465 10,186,928 10,200,098 RGD:9068941
G Palb2 partner and localizer of BRCA2 JBrowse link NW_004955493 2,149,053 2,175,482 RGD:9068941
G Parl presenilin associated rhomboid like JBrowse link NW_004955420 23,549,125 23,581,782 RGD:9068941
G Pdgfra platelet derived growth factor receptor alpha JBrowse link NW_004955447 16,570,652 16,613,410 RGD:9068941
G Pdgfrb platelet derived growth factor receptor beta JBrowse link NW_004955415 4,365,848 4,403,317 RGD:9068941
G Plcg1 phospholipase C gamma 1 JBrowse link NW_004955445 15,787,496 15,823,859 RGD:9068941
G Plk1 polo like kinase 1 JBrowse link NW_004955493 2,206,353 2,217,231 RGD:9068941
G Plk3 polo like kinase 3 JBrowse link NW_004955464 13,419,562 13,424,104 RGD:9068941
G Prc1 protein regulator of cytokinesis 1 JBrowse link NW_004955416 15,023,620 15,045,958 RGD:9068941
G Prss8 serine protease 8 JBrowse link NW_004955493 7,970,929 7,976,885 RGD:9068941
G Psmb9 proteasome 20S subunit beta 9 JBrowse link NW_004955437 1,513,425 1,516,164 RGD:9068941
G Rhoa ras homolog family member A JBrowse link NW_004955532 1,300,821 1,347,453 RGD:9068941
G Rrm2 ribonucleotide reductase regulatory subunit M2 JBrowse link NW_004955487 5,477,097 5,481,422 RGD:9068941
G Smad2 SMAD family member 2 JBrowse link NW_004955402 33,131,760 33,217,144 RGD:9068941
G Snw1 SNW domain containing 1 JBrowse link NW_004955438 1,561,562 1,601,492 RGD:9068941
G Srd5a1 steroid 5 alpha-reductase 1 JBrowse link NW_004955504 4,360,909 4,388,964 RGD:9068941
G Srd5a2 steroid 5 alpha-reductase 2 JBrowse link NW_004955441 12,149 95,733 RGD:9068941
G Stat1 signal transducer and activator of transcription 1 JBrowse link NW_004955403 8,156,660 8,192,018 RGD:9068941
G Stk11 serine/threonine kinase 11 JBrowse link NW_004955495 6,678,195 6,699,408 RGD:9068941
G Tfrc transferrin receptor JBrowse link NW_004955420 12,348,392 12,372,714 RGD:9068941
G Thoc5 THO complex 5 JBrowse link NW_004955455 3,761,933 3,795,517 RGD:9068941
G Thrb thyroid hormone receptor beta JBrowse link NW_004955430 15,992,146 16,322,696 RGD:9068941
G Timp3 TIMP metallopeptidase inhibitor 3 JBrowse link NW_004955405 41,613,976 41,655,813 RGD:9068941
G Tsg101 tumor susceptibility 101 JBrowse link NW_004955414 33,154,812 33,193,769 RGD:9068941
G Vegfc vascular endothelial growth factor C JBrowse link NW_004955403 31,016,423 31,130,892 RGD:9068941
G Wnt2 Wnt family member 2 JBrowse link NW_004955432 22,988,208 23,024,530 RGD:9068941
G Zfhx3 zinc finger homeobox 3 JBrowse link NW_004955484 5,470,203 5,746,325 RGD:9068941
breast carcinoma in situ term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Igf2r insulin like growth factor 2 receptor JBrowse link NW_004955439 20,754,915 20,874,759 RGD:9068941
breast ductal carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc9 ATP binding cassette subfamily C member 9 JBrowse link NW_004955413 17,385,966 17,510,220 RGD:9068941
G Alox5 arachidonate 5-lipoxygenase JBrowse link NW_004955546 2,495,226 2,550,909 RGD:9068941
G Amfr autocrine motility factor receptor JBrowse link NW_004955433 14,172,871 14,205,484 RGD:9068941
G Bcar1 BCAR1 scaffold protein, Cas family member JBrowse link NW_004955484 2,223,306 2,258,444 RGD:9068941
G Brca1 BRCA1 DNA repair associated JBrowse link NW_004955451 16,819,463 16,870,780 RGD:9068941
G Brca2 BRCA2 DNA repair associated JBrowse link NW_004955431 13,449,287 13,526,878 RGD:9068941
G Bsg basigin (Ok blood group) JBrowse link NW_004955495 7,148,806 7,156,296 RGD:9068941
G Cacna1c calcium voltage-gated channel subunit alpha1 C JBrowse link NW_004955454 4,573,647 5,199,046 RGD:9068941
G Cacna1h calcium voltage-gated channel subunit alpha1 H JBrowse link NW_004955442 16,047,965 16,108,862 RGD:9068941
G Ccdc180 coiled-coil domain containing 180 JBrowse link NW_004955419 28,002,063 28,066,145 RGD:9068941
G Ccdc71l coiled-coil domain containing 71 like JBrowse link NW_004955434 21,505,839 21,509,427 RGD:9068941
G Cd44 CD44 molecule (Indian blood group) JBrowse link NW_004955422 11,106,061 11,189,951 RGD:9068941
G Cnnm1 cyclin and CBS domain divalent metal cation transport mediator 1 JBrowse link NW_004955507 5,283,948 5,342,860 RGD:9068941
G Coro6 coronin 6 JBrowse link NW_004955481 3,636,287 3,644,330 RGD:9068941
G Cpxm2 carboxypeptidase X, M14 family member 2 JBrowse link NW_004955477 1,840,642 1,975,531 RGD:9068941
G Creb3 cAMP responsive element binding protein 3 JBrowse link NW_004955472 564,227 568,708 RGD:9068941
G Ebag9 estrogen receptor binding site associated antigen 9 JBrowse link NW_004955417 16,941,035 16,958,876 RGD:9068941
G Fubp1 far upstream element binding protein 1 JBrowse link NW_004955423 15,245,645 15,278,628 RGD:9068941
G Htra2 HtrA serine peptidase 2 JBrowse link NW_004955424 11,255,756 11,259,170 RGD:9068941
G Kndc1 kinase non-catalytic C-lobe domain containing 1 JBrowse link NW_004955477 10,792,066 10,850,457 RGD:9068941
G Lrat lecithin retinol acyltransferase JBrowse link NW_004955471 2,603,395 2,610,988 RGD:9068941
G Mical2 microtubule associated monooxygenase, calponin and LIM domain containing 2 JBrowse link NW_004955414 27,600,823 27,804,232 RGD:9068941
G Notch3 notch receptor 3 JBrowse link NW_004955495 8,012,370 8,048,616 RGD:9068941
G Nts neurotensin JBrowse link NW_004955405 23,696,258 23,758,487 RGD:9068941
G Phf24 PHD finger protein 24 JBrowse link NW_004955472 1,186,021 1,204,018 RGD:9068941
G Plk4 polo like kinase 4 JBrowse link NW_004955428 13,548,485 13,566,786 RGD:9068941
G Pml PML nuclear body scaffold JBrowse link NW_004955450 3,654,854 3,692,057 RGD:9068941
G Rad54l RAD54 like JBrowse link NW_004955464 11,996,512 12,033,525 RGD:9068941
G Rnf212 ring finger protein 212 JBrowse link NW_004955514 525,430 559,037 RGD:9068941
G Rp1 RP1 axonemal microtubule associated JBrowse link NW_004955454 13,781,556 14,082,310 RGD:9068941
G Rrp1 ribosomal RNA processing 1 JBrowse link NW_004955407 41,456,291 41,466,040 RGD:9068941
G Slitrk6 SLIT and NTRK like family member 6 JBrowse link NW_004955404 22,738,080 22,744,601 RGD:9068941
G Spen spen family transcriptional repressor JBrowse link NW_004955527 2,279,438 2,343,263 RGD:9068941
G Syt6 synaptotagmin 6 JBrowse link NW_004955435 17,349,971 17,405,526 RGD:9068941
G Tp73 tumor protein p73 JBrowse link NW_004955486 7,914,608 7,961,992 RGD:9068941
G Tspan8 tetraspanin 8 JBrowse link NW_004955405 11,200,290 11,233,094 RGD:9068941
G Tspear thrombospondin type laminin G domain and EAR repeats JBrowse link NW_004955407 41,513,538 41,566,931 RGD:9068941
G Xiap X-linked inhibitor of apoptosis JBrowse link NW_004955473 10,823,795 10,878,256 RGD:9068941
G Yeats2 YEATS domain containing 2 JBrowse link NW_004955420 23,590,636 23,666,689 RGD:9068941
G Zdbf2 zinc finger DBF-type containing 2 JBrowse link NW_004955457 8,660,448 8,688,116 RGD:9068941
G Znf473 zinc finger protein 473 JBrowse link NW_004955559 911,785 932,510 RGD:9068941
cribriform carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crebbp CREB binding protein JBrowse link NW_004955442 13,559,496 13,691,913 RGD:9068941
G Fbxw7 F-box and WD repeat domain containing 7 JBrowse link NW_004955471 6,852,459 7,026,590 RGD:9068941
G Hras HRas proto-oncogene, GTPase JBrowse link NW_004955476 11,508,446 11,510,333 RGD:9068941
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 JBrowse link NW_004955457 6,851,542 6,869,452 RGD:9068941
G Kras KRAS proto-oncogene, GTPase JBrowse link NW_004955413 20,298,852 20,328,756 RGD:9068941
G Lrrc56 leucine rich repeat containing 56 JBrowse link NW_004955476 11,493,299 11,507,022 RGD:9068941
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha JBrowse link NW_004955420 8,355,415 8,427,024 RGD:9068941
G Tp53 tumor protein p53 JBrowse link NW_004955467 9,241,391 9,256,716 RGD:9068941
ductal carcinoma in situ term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Anxa1 annexin A1 JBrowse link NW_004955512 5,686,508 5,703,645 RGD:9068941
G Ar androgen receptor JBrowse link NW_004955475 7,013,960 7,192,473 RGD:9068941
G Areg amphiregulin JBrowse link NW_004955474 680,212 689,021 RGD:9068941
G Bcl2 BCL2 apoptosis regulator JBrowse link NW_004955402 46,911,125 47,084,214 RGD:9068941
G Bnip3 BCL2 interacting protein 3 JBrowse link NW_004955477 9,621,812 9,630,406 RGD:9068941
G Brca2 BRCA2 DNA repair associated JBrowse link NW_004955431 13,449,287 13,526,878 RGD:9068941
G Ca9 carbonic anhydrase 9 JBrowse link NW_004955472 619,084 625,570 RGD:9068941
G Casp6 caspase 6 JBrowse link NW_004955496 575,839 584,287 RGD:9068941
G Ccnd1 cyclin D1 JBrowse link NW_004955422 16,449,921 16,462,676 RGD:9068941
G Ccnd2 cyclin D2 JBrowse link NW_004955413 2,083,351 2,108,450 RGD:9068941
G Cdkn1a cyclin dependent kinase inhibitor 1A JBrowse link NW_004955437 6,254,638 6,261,278 RGD:9068941
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link NW_004955451 14,442,816 14,456,009 RGD:9068941
G Erbb3 erb-b2 receptor tyrosine kinase 3 JBrowse link NW_004955458 3,683,126 3,701,752 RGD:9068941
G Erbb4 erb-b2 receptor tyrosine kinase 4 JBrowse link NW_004955457 3,177,905 4,236,152 RGD:9068941
G Flt1 fms related receptor tyrosine kinase 1 JBrowse link NW_004955497 7,653,309 7,831,737 RGD:9068941
G Fosl1 FOS like 1, AP-1 transcription factor subunit JBrowse link NW_004955422 19,425,741 19,431,801 RGD:9068941
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link NW_004955466 8,000,311 8,022,497 RGD:9068941
G Hoxb13 homeobox B13 JBrowse link NW_004955451 12,536,415 12,538,169 RGD:9068941
G Klk10 kallikrein related peptidase 10 JBrowse link NW_004955558 1,466,162 1,471,112 RGD:9068941
G Ldhb lactate dehydrogenase B JBrowse link NW_004955413 17,264,337 17,283,530 RGD:9068941
G Mmp2 matrix metallopeptidase 2 JBrowse link NW_004955433 13,024,844 13,050,041 RGD:9068941
G Mmp9 matrix metallopeptidase 9 JBrowse link NW_004955445 11,295,500 11,303,322 RGD:9068941
G Notch4 notch receptor 4 JBrowse link NW_004955437 658,076 679,338 RGD:9068941
G Pak2 p21 (RAC1) activated kinase 2 JBrowse link NW_004955420 12,893,760 12,930,955 RGD:9068941
G Pgr progesterone receptor JBrowse link NW_004955412 4,643,839 4,693,478 RGD:9068941
G Prkca protein kinase C alpha JBrowse link NW_004955478 5,686,639 6,090,356 RGD:9068941
G Ptges prostaglandin E synthase JBrowse link NW_004955445 10,053,745 10,056,981 RGD:9068941
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link NW_004955406 25,077,988 25,086,259 RGD:9068941
G Ptk2 protein tyrosine kinase 2 JBrowse link NW_004955461 14,337,914 14,622,779 RGD:9068941
G Rb1 RB transcriptional corepressor 1 JBrowse link NW_004955431 1,960,765 2,124,576 RGD:9068941
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link NW_004955422 19,602,930 19,612,263 RGD:9068941
G Slc2a1 solute carrier family 2 member 1 JBrowse link NW_004955537 2,408,042 2,438,788 RGD:9068941
G Socs1 suppressor of cytokine signaling 1 JBrowse link NW_004955442 7,321,337 7,323,109 RGD:9068941
G Socs2 suppressor of cytokine signaling 2 JBrowse link NW_004955405 30,349,956 30,623,849 RGD:9068941
G Socs3 suppressor of cytokine signaling 3 JBrowse link NW_004955506 4,222,455 4,225,563 RGD:9068941
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link NW_004955445 19,213,210 19,227,670 RGD:9068941
G St14 ST14 transmembrane serine protease matriptase JBrowse link NW_004955412 31,091,313 31,129,050 RGD:9068941
G Stat5a signal transducer and activator of transcription 5A JBrowse link NW_004955451 16,305,363 16,319,219 RGD:9068941
G Tert telomerase reverse transcriptase JBrowse link NW_004955504 649,248 669,796 RGD:9068941
G Tff1 trefoil factor 1 JBrowse link NW_004955407 39,363,693 39,365,724 RGD:9068941
G Timp2 TIMP metallopeptidase inhibitor 2 JBrowse link NW_004955506 3,769,113 3,812,896 RGD:9068941
G Timp4 TIMP metallopeptidase inhibitor 4 JBrowse link NW_004955429 14,689,016 14,693,211 RGD:9068941
G Top2a DNA topoisomerase II alpha JBrowse link NW_004955451 14,928,273 14,964,855 RGD:9068941
G Tp53 tumor protein p53 JBrowse link NW_004955467 9,241,391 9,256,716 RGD:9068941
G Tymp thymidine phosphorylase JBrowse link NW_004955413 33,505,424 33,509,095 RGD:9068941
G Vegfa vascular endothelial growth factor A JBrowse link NW_004955437 9,527,445 9,541,908 RGD:9068941
Ehrlich tumor carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd40 CD40 molecule JBrowse link NW_004955445 11,191,817 11,202,156 RGD:9068941
G Cd40lg CD40 ligand JBrowse link NW_004955489 8,465,571 8,477,714 RGD:9068941
estrogen-receptor negative breast cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC102012303 NADH-cytochrome b5 reductase 3 JBrowse link NW_004955413 27,971,140 27,979,905 RGD:9068941
estrogen-receptor positive breast cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Carm1 coactivator associated arginine methyltransferase 1 JBrowse link NW_004955495 1,983,599 2,002,174 RGD:9068941
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha JBrowse link NW_004955420 8,355,415 8,427,024 RGD:9068941
hereditary breast ovarian cancer syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abraxas1 abraxas 1, BRCA1 A complex subunit JBrowse link NW_004955474 6,252,321 6,265,518 RGD:9068941
G Aopep aminopeptidase O (putative) JBrowse link NW_004955422 21,680,488 22,020,935 RGD:9068941
G Arl4d ADP ribosylation factor like GTPase 4D JBrowse link NW_004955451 16,912,424 16,913,447 RGD:9068941
G Atm ATM serine/threonine kinase JBrowse link NW_004955412 10,422,753 10,531,406 RGD:9068941
G Bard1 BRCA1 associated RING domain 1 JBrowse link NW_004955457 1,187,942 1,258,475 RGD:9068941
G Blm BLM RecQ like helicase JBrowse link NW_004955416 14,814,753 14,899,865 RGD:9068941
G Brca1 BRCA1 DNA repair associated JBrowse link NW_004955451 16,819,463 16,870,780 RGD:7240710
G Brca2 BRCA2 DNA repair associated JBrowse link NW_004955431 13,449,287 13,526,878 RGD:7240710
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link NW_004955451 2,705,834 2,820,610 RGD:9068941
G Cdh1 cadherin 1 JBrowse link NW_004955484 7,782,409 7,861,082 RGD:9068941
G Chek2 checkpoint kinase 2 JBrowse link NW_004955455 2,969,113 3,008,004 RGD:9068941
G CUNH11orf65 chromosome unknown C11orf65 homolog JBrowse link NW_004955412 10,533,174 10,567,364 RGD:9068941
G Dhx8 DEAH-box helicase 8 JBrowse link NW_004955451 16,941,422 16,963,690 RGD:9068941
G Epcam epithelial cell adhesion molecule JBrowse link NW_004955441 14,155,084 14,167,584 RGD:9068941
G Etv4 ETS variant transcription factor 4 JBrowse link NW_004955451 16,965,404 16,976,503 RGD:9068941
G Fancc FA complementation group C JBrowse link NW_004955422 22,031,825 22,246,478 RGD:9068941
G Fancm FA complementation group M JBrowse link NW_004955409 16,751,658 16,809,352 RGD:9068941
G Fndc8 fibronectin type III domain containing 8 JBrowse link NW_004955481 9,812,402 9,820,070 RGD:9068941
G Mlh1 mutL homolog 1 JBrowse link NW_004955421 3,890,291 3,936,892 RGD:9068941
G Msh2 mutS homolog 2 JBrowse link NW_004955441 14,188,315 14,247,608 RGD:9068941
G Msh6 mutS homolog 6 JBrowse link NW_004955441 14,451,207 14,471,316 RGD:9068941
G Nbn nibrin JBrowse link NW_004955417 6,840,916 6,880,479 RGD:9068941
G Nbr1 NBR1 autophagy cargo receptor JBrowse link NW_004955451 16,871,091 16,896,090 RGD:9068941
G Nf1 neurofibromin 1 JBrowse link NW_004955481 6,145,855 6,404,179 RGD:9068941
G Palb2 partner and localizer of BRCA2 JBrowse link NW_004955493 2,149,053 2,175,482 RGD:9068941
G Pms1 PMS1 homolog 1, mismatch repair system component JBrowse link NW_004955403 9,021,488 9,100,442 RGD:9068941
G Pms2 PMS1 homolog 2, mismatch repair system component JBrowse link NW_004955460 13,762,854 13,791,462 RGD:9068941
G Pten phosphatase and tensin homolog JBrowse link NW_004955425 5,007,811 5,091,829 RGD:9068941
G Pyroxd1 pyridine nucleotide-disulphide oxidoreductase domain 1 JBrowse link NW_004955413 17,097,859 17,115,148 RGD:9068941
G Rad50 RAD50 double strand break repair protein JBrowse link NW_004955408 3,953,801 4,035,494 RGD:9068941
G Rad51b RAD51 paralog B JBrowse link NW_004955466 1,686,472 2,388,146 RGD:9068941
G Rad51c RAD51 paralog C JBrowse link NW_004955451 4,053,195 4,178,226 RGD:7240710
RGD:9068941
G Rad51d RAD51 paralog D JBrowse link NW_004955481 9,795,102 9,810,426 RGD:7240710
RGD:9068941
G Recql RecQ like helicase JBrowse link NW_004955413 17,115,443 17,148,708 RGD:9068941
G Rint1 RAD50 interactor 1 JBrowse link NW_004955410 10,121,322 10,144,748 RGD:9068941
G Rnd2 Rho family GTPase 2 JBrowse link NW_004955451 16,806,527 16,809,091 RGD:9068941
G Stk11 serine/threonine kinase 11 JBrowse link NW_004955495 6,678,195 6,699,408 RGD:9068941
G Tex14 testis expressed 14, intercellular bridge forming factor JBrowse link NW_004955451 4,206,114 4,296,969 RGD:9068941
G Tmem106a transmembrane protein 106A JBrowse link NW_004955451 16,896,151 16,902,117 RGD:9068941
G Tp53 tumor protein p53 JBrowse link NW_004955467 9,241,391 9,256,716 RGD:9068941
G Xrcc2 X-ray repair cross complementing 2 JBrowse link NW_004955491 6,579,443 6,629,410 RGD:9068941
G Zar1l zygote arrest 1 like JBrowse link NW_004955431 13,532,795 13,541,771 RGD:9068941
invasive ductal carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb1 ATP binding cassette subfamily B member 1 JBrowse link NW_004955432 4,911,774 5,085,349 RGD:9068941
G Adgrb1 adhesion G protein-coupled receptor B1 JBrowse link NW_004955454 1,250,261 1,313,547 RGD:9068941
G Ager advanced glycosylation end-product specific receptor JBrowse link NW_004955437 645,482 648,607 RGD:9068941
G Akt1 AKT serine/threonine kinase 1 JBrowse link NW_004955538 3,208,711 3,224,386 RGD:9068941
G Anxa1 annexin A1 JBrowse link NW_004955512 5,686,508 5,703,645 RGD:9068941
G Anxa2 annexin A2 JBrowse link NW_004955450 14,545,586 14,574,161 RGD:9068941
G Ar androgen receptor JBrowse link NW_004955475 7,013,960 7,192,473 RGD:9068941
G Areg amphiregulin JBrowse link NW_004955474 680,212 689,021 RGD:9068941
G Arpc2 actin related protein 2/3 complex subunit 2 JBrowse link NW_004955453 15,117,978 15,145,895 RGD:9068941
G Atf4 activating transcription factor 4 JBrowse link NW_004955413 25,406,589 25,408,727 RGD:9068941
G Aurka aurora kinase A JBrowse link NW_004955445 2,831,073 2,853,151 RGD:9068941
G Bag1 BAG cochaperone 1 JBrowse link NW_004955472 2,394,317 2,405,199 RGD:9068941
G Brca1 BRCA1 DNA repair associated JBrowse link NW_004955451 16,819,463 16,870,780 RGD:9068941
G Brca2 BRCA2 DNA repair associated JBrowse link NW_004955431 13,449,287 13,526,878 RGD:9068941
G Brms1 BRMS1 transcriptional repressor and anoikis regulator JBrowse link NW_004955422 18,981,984 18,989,730 RGD:9068941
G Cav1 caveolin 1 JBrowse link NW_004955432 22,258,262 22,292,403 RGD:9068941
G Ccl5 C-C motif chemokine ligand 5 JBrowse link NW_004955481 10,293,758 10,301,118 RGD:9068941
G Ccnd3 cyclin D3 JBrowse link NW_004955437 8,266,523 8,273,855 RGD:9068941
G Cd44 CD44 molecule (Indian blood group) JBrowse link NW_004955422 11,106,061 11,189,951 RGD:9068941
G Cdh1 cadherin 1 JBrowse link NW_004955484 7,782,409 7,861,082 RGD:9068941
G Cldn4 claudin 4 JBrowse link NW_004955456 13,961,743 13,965,498 RGD:9068941
G Clu clusterin JBrowse link NW_004955403 50,160,598 50,175,876 RGD:9068941
G Crkl CRK like proto-oncogene, adaptor protein JBrowse link NW_004955442 19,358,202 19,388,552 RGD:9068941
G Csnk1e casein kinase 1 epsilon JBrowse link NW_004955413 24,560,889 24,591,669 RGD:9068941
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link NW_004955420 13,068,289 13,273,805 RGD:9068941
G Ebag9 estrogen receptor binding site associated antigen 9 JBrowse link NW_004955417 16,941,035 16,958,876 RGD:9068941
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link NW_004955451 14,442,816 14,456,009 RGD:9068941
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit JBrowse link NW_004955491 4,215,353 4,292,229 RGD:9068941
G Fgd1 FYVE, RhoGEF and PH domain containing 1 JBrowse link NW_004955475 1,703,374 1,752,710 RGD:9068941
G Fhit fragile histidine triad diadenosine triphosphatase JBrowse link NW_004955430 221,518 508,094 RGD:9068941
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link NW_004955466 8,000,311 8,022,497 RGD:9068941
G Hoxb7 homeobox B7 JBrowse link NW_004955451 12,630,276 12,634,641 RGD:9068941
G Hsd17b1 hydroxysteroid 17-beta dehydrogenase 1 JBrowse link NW_004955451 16,449,333 16,452,036 RGD:9068941
G Il13 interleukin 13 JBrowse link NW_004955408 4,046,406 4,049,795 RGD:9068941
G Il18 interleukin 18 JBrowse link NW_004955412 13,807,361 13,826,007 RGD:9068941
G Inha inhibin subunit alpha JBrowse link NW_004955453 13,902,443 13,905,008 RGD:9068941
G Jup junction plakoglobin JBrowse link NW_004955451 15,993,055 16,004,152 RGD:9068941
G Kiss1 KiSS-1 metastasis suppressor JBrowse link NW_004955406 40,043,139 40,045,973 RGD:9068941
G Kit KIT proto-oncogene, receptor tyrosine kinase JBrowse link NW_004955447 16,149,014 16,226,151 RGD:9068941
G Map2k4 mitogen-activated protein kinase kinase 4 JBrowse link NW_004955467 5,188,036 5,295,570 RGD:9068941
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link NW_004955432 22,440,671 22,519,592 RGD:9068941
G Mmp13 matrix metallopeptidase 13 JBrowse link NW_004955412 6,106,994 6,118,760 RGD:9068941
G Ncoa4 nuclear receptor coactivator 4 JBrowse link NW_004955556 392,412 413,643 RGD:9068941
G Nefl neurofilament light JBrowse link NW_004955403 47,946,413 47,951,734 RGD:9068941
G Pcna proliferating cell nuclear antigen JBrowse link NW_004955415 15,744,601 15,748,910 RGD:9068941
G Prkci protein kinase C iota JBrowse link NW_004955420 423,406 486,676 RGD:9068941
G Ptger1 prostaglandin E receptor 1 JBrowse link NW_004955415 33,063,052 33,067,580 RGD:9068941
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link NW_004955406 25,077,988 25,086,259 RGD:9068941
G Rad50 RAD50 double strand break repair protein JBrowse link NW_004955408 3,953,801 4,035,494 RGD:9068941
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004955452 4,580,444 4,606,820 RGD:9068941
G Serpinb5 serpin family B member 5 JBrowse link NW_004955402 47,248,665 47,276,017 RGD:9068941
G Slc9a3r1 SLC9A3 regulator 1 JBrowse link NW_004955553 1,639,267 1,656,850 RGD:9068941
G Smad4 SMAD family member 4 JBrowse link NW_004955402 35,956,080 36,001,746 RGD:9068941
G Socs1 suppressor of cytokine signaling 1 JBrowse link NW_004955442 7,321,337 7,323,109 RGD:9068941
G Socs2 suppressor of cytokine signaling 2 JBrowse link NW_004955405 30,349,956 30,623,849 RGD:9068941
G Socs3 suppressor of cytokine signaling 3 JBrowse link NW_004955506 4,222,455 4,225,563 RGD:9068941
G Sod2 superoxide dismutase 2 JBrowse link NW_004955439 21,209,101 21,223,538 RGD:9068941
G Tmbim6 transmembrane BAX inhibitor motif containing 6 JBrowse link NW_004955547 335,344 358,503 RGD:9068941
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 JBrowse link NW_004955417 26,997,572 27,085,511 RGD:9068941
G Vegfc vascular endothelial growth factor C JBrowse link NW_004955403 31,016,423 31,130,892 RGD:9068941
G Wif1 WNT inhibitory factor 1 JBrowse link NW_004955458 11,755,147 11,834,047 RGD:9068941
G Xrcc1 X-ray repair cross complementing 1 JBrowse link NW_004955555 1,293,416 1,315,839 RGD:9068941
invasive lobular carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agtr2 angiotensin II receptor type 2 JBrowse link NW_004955534 3,653,112 3,654,248 RGD:9068941
G Ccnd1 cyclin D1 JBrowse link NW_004955422 16,449,921 16,462,676 RGD:9068941
G Ccnd2 cyclin D2 JBrowse link NW_004955413 2,083,351 2,108,450 RGD:9068941
G Cd44 CD44 molecule (Indian blood group) JBrowse link NW_004955422 11,106,061 11,189,951 RGD:9068941
G Cdh1 cadherin 1 JBrowse link NW_004955484 7,782,409 7,861,082 RGD:9068941
G Ctnna1 catenin alpha 1 JBrowse link NW_004955418 1,592,555 1,754,423 RGD:9068941
G Ctnnb1 catenin beta 1 JBrowse link NW_004955420 29,030,716 29,047,447 RGD:9068941
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link NW_004955451 14,442,816 14,456,009 RGD:9068941
G Faslg Fas ligand JBrowse link NW_004955406 13,098,479 13,107,045 RGD:9068941
G Myh9 myosin heavy chain 9 JBrowse link NW_004955413 22,881,759 22,972,182 RGD:9068941
G Ppp1r12b protein phosphatase 1 regulatory subunit 12B JBrowse link NW_004955406 38,405,297 38,636,503 RGD:9068941
G Stat5a signal transducer and activator of transcription 5A JBrowse link NW_004955451 16,305,363 16,319,219 RGD:9068941
G Tp53bp2 tumor protein p53 binding protein 2 JBrowse link NW_004955520 1,254,853 1,285,118 RGD:9068941
male breast cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brca2 BRCA2 DNA repair associated JBrowse link NW_004955431 13,449,287 13,526,878 RGD:9068941
G Chek2 checkpoint kinase 2 JBrowse link NW_004955455 2,969,113 3,008,004 RGD:9068941
G Vdr vitamin D receptor JBrowse link NW_004955500 6,745,725 6,798,052 RGD:9068941
mammary Paget's disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link NW_004955451 14,442,816 14,456,009 RGD:9068941
sporadic breast cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Esr1 estrogen receptor 1 JBrowse link NW_004955439 9,588,631 9,953,606 RGD:9068941
G Mlh1 mutL homolog 1 JBrowse link NW_004955421 3,890,291 3,936,892 RGD:9068941
G Phb prohibitin JBrowse link NW_004955451 12,110,290 12,119,870 RGD:9068941
G Pten phosphatase and tensin homolog JBrowse link NW_004955425 5,007,811 5,091,829 RGD:9068941
triple-receptor negative breast cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Antxr1 ANTXR cell adhesion molecule 1 JBrowse link NW_004955424 15,820,734 16,034,278 RGD:9068941
G Barhl1 BarH like homeobox 1 JBrowse link NW_004955513 1,955,906 1,970,110 RGD:9068941
G Tp73 tumor protein p73 JBrowse link NW_004955486 7,914,608 7,961,992 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 11744
    disease of cellular proliferation 5113
      Neoplasms by Site 4566
        Breast Neoplasms 982
          breast cancer 502
            Breast Cancer 3 0
            Breast Cancer, Familial + 49
            Her2-receptor negative breast cancer 0
            Her2-receptor positive breast cancer 0
            breast carcinoma + 234
            breast granular cell tumor 0
            breast lymphoma 0
            breast malignant eccrine spiradenoma 0
            breast malignant phyllodes tumor 0
            breast myoepithelial neoplasm + 0
            breast sarcoma + 0
            estrogen-receptor negative breast cancer 1
            estrogen-receptor positive breast cancer 2
            female breast cancer + 0
            hereditary breast ovarian cancer syndrome 42
            male breast cancer + 3
            malignant breast melanoma 0
            progesterone-receptor negative breast cancer 0
            progesterone-receptor positive breast cancer 0
            triple-receptor negative breast cancer 3
Path 2
Term Annotations click to browse term
  disease 11744
    disease of anatomical entity 11304
      nervous system disease 9202
        sensory system disease 4321
          skin disease 2272
            breast disease 988
              Breast Neoplasms 982
                breast cancer 502
                  Breast Cancer 3 0
                  Breast Cancer, Familial + 49
                  Her2-receptor negative breast cancer 0
                  Her2-receptor positive breast cancer 0
                  breast carcinoma + 234
                  breast granular cell tumor 0
                  breast lymphoma 0
                  breast malignant eccrine spiradenoma 0
                  breast malignant phyllodes tumor 0
                  breast myoepithelial neoplasm + 0
                  breast sarcoma + 0
                  estrogen-receptor negative breast cancer 1
                  estrogen-receptor positive breast cancer 2
                  female breast cancer + 0
                  hereditary breast ovarian cancer syndrome 42
                  male breast cancer + 3
                  malignant breast melanoma 0
                  progesterone-receptor negative breast cancer 0
                  progesterone-receptor positive breast cancer 0
                  triple-receptor negative breast cancer 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.