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ONTOLOGY REPORT - ANNOTATIONS


Term:cystitis
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Accession:DOID:1679 term browser browse the term
Definition:Inflammation of the URINARY BLADDER, either from bacterial or non-bacterial causes. Cystitis is usually associated with painful urination (dysuria), increased frequency, urgency, and suprapubic pain.
Synonyms:exact_synonym: Cystitides
 primary_id: MESH:D003556;   RDO:0005308
 xref: NCI:C26738
For additional species annotation, visit the Alliance of Genome Resources.


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cystitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adcyap1 adenylate cyclase activating polypeptide 1 JBrowse link 9 121,705,897 121,725,736 RGD:2315964
G Adcyap1r1 ADCYAP receptor type I JBrowse link 4 85,662,809 85,711,696 RGD:2315964
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:5684910
RGD:8657090
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:11035303
G Csf3 colony stimulating factor 3 JBrowse link 10 86,616,785 86,619,160 RGD:2317284
G Cx3cl1 C-X3-C motif chemokine ligand 1 JBrowse link 19 10,644,267 10,654,861 RGD:4891972
G Cx3cr1 C-X3-C motif chemokine receptor 1 JBrowse link 8 128,740,756 128,754,514 RGD:4891972
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:5508847
G Il11 interleukin 11 JBrowse link 1 72,636,959 72,643,255 RGD:11554173
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:2317284
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:6907118
RGD:7175333
G Il2 interleukin 2 JBrowse link 2 123,847,150 123,851,854 RGD:5147913
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:2317284
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:5684428
G Lta lymphotoxin alpha JBrowse link 20 4,851,889 4,854,677 RGD:6907118
G Mif macrophage migration inhibitory factor JBrowse link 20 13,715,219 13,732,980 RGD:1642002
RGD:4890977
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:7174704
G Muc2 mucin 2, oligomeric mucus/gel-forming JBrowse link 1 214,663,929 214,693,197 RGD:7349345
G Muc5ac mucin 5AC, oligomeric mucus/gel-forming JBrowse link 1 214,725,482 214,756,653 RGD:7349345
G Ngf nerve growth factor JBrowse link 2 204,886,158 204,939,523 RGD:7242782
RGD:7242802
RGD:7242808
RGD:11554173
G Ngfr nerve growth factor receptor JBrowse link 10 83,389,828 83,408,061 RGD:5508447
G Pdcd1 programmed cell death 1 JBrowse link 9 101,305,742 101,319,937 RGD:7248677
G Pomc proopiomelanocortin JBrowse link 6 28,382,937 28,388,771 RGD:11554173
G Ptger4 prostaglandin E receptor 4 JBrowse link 2 54,951,625 54,966,470 RGD:5147913
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:5135058
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link 1 220,992,770 221,003,249 RGD:11554173
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:11035303
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:11035303
G Tacr1 tachykinin receptor 1 JBrowse link 4 113,247,236 113,416,139 RGD:2304340
G Tlr5 toll-like receptor 5 JBrowse link 13 101,364,784 101,385,764 RGD:7246906
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6907118
hemorrhagic cystitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gsr glutathione-disulfide reductase JBrowse link 16 62,197,617 62,239,987 RGD:7257548
interstitial cystitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adrb2 adrenoceptor beta 2 JBrowse link 18 57,513,792 57,515,834 RGD:7175285
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:6907432
G Csf1 colony stimulating factor 1 JBrowse link 2 210,522,370 210,550,546 RGD:7241234
G Csf2 colony stimulating factor 2 JBrowse link 10 39,602,089 39,604,070 RGD:2317284
G Cxcl10 C-X-C motif chemokine ligand 10 JBrowse link 14 17,210,733 17,212,930 RGD:11554173
G Cxcl11 C-X-C motif chemokine ligand 11 JBrowse link 14 17,195,395 17,198,170 RGD:11554173
G Cxcl9 C-X-C motif chemokine ligand 9 JBrowse link 14 17,228,832 17,233,743 RGD:11554173
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:7364800
G Mki67 marker of proliferation Ki-67 JBrowse link 1 207,993,895 208,020,454 RGD:6483539
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:7245526
G Ngf nerve growth factor JBrowse link 2 204,886,158 204,939,523 RGD:7242773
RGD:7242805
RGD:7242781
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:4891153
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:7245525
G Vcam1 vascular cell adhesion molecule 1 JBrowse link 2 219,071,193 219,090,931 RGD:7241234

Term paths to the root
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Term Annotations click to browse term
  disease 15036
    disease of anatomical entity 14171
      Urogenital Diseases 3922
        urinary system disease 2011
          bladder disease 383
            cystitis 43
              Pyelocystitis 0
              acute cystitis + 0
              chronic cystitis + 0
              cystitis cystica 0
              diphtheritic cystitis 0
              hemorrhagic cystitis 1
              interstitial cystitis + 14
              prostatocystitis 0
              radiation cystitis 0
              trigonitis 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.