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ONTOLOGY REPORT - ANNOTATIONS


Term:leiomyosarcoma
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Accession:DOID:1967 term browser browse the term
Definition:A sarcoma containing large spindle cells of smooth muscle. Although it rarely occurs in soft tissue, it is common in the viscera. It is the most common soft tissue sarcoma of the gastrointestinal tract and uterus. The median age of patients is 60 years. (From Dorland, 27th ed; Holland et al., Cancer Medicine, 3d ed, p1865)
Synonyms:exact_synonym: Leiomyosarcomas
 primary_id: MESH:D007890
 alt_id: RDO:0005973
 xref: GARD:6880;   NCI:C3158
For additional species annotation, visit the Alliance of Genome Resources.


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leiomyosarcoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amhr2 anti-Mullerian hormone receptor type 2 JBrowse link 7 144,052,202 144,060,678 RGD:2315651
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:2296049
G Chek2 checkpoint kinase 2 JBrowse link 12 51,845,574 51,878,098 RGD:8554872
G Csf3 colony stimulating factor 3 JBrowse link 10 86,616,785 86,619,160 RGD:11554173
G Dmd dystrophin JBrowse link X 51,149,358 53,519,271 RGD:11554173
G Flt1 FMS-related tyrosine kinase 1 JBrowse link 12 9,033,993 9,205,886 RGD:2289964
G Hmga1 high mobility group AT-hook 1 JBrowse link 20 7,132,501 7,140,155 RGD:11554173
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:2292170
G Med12 mediator complex subunit 12 JBrowse link X 71,174,653 71,197,812 RGD:11353203
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:11554173
G Tert telomerase reverse transcriptase JBrowse link 1 32,250,876 32,275,330 RGD:2298564
G Usp18 ubiquitin specific peptidase 18 JBrowse link 4 153,812,312 153,834,374 RGD:11554173
G Xrn2 5'-3' exoribonuclease 2 JBrowse link 3 141,224,858 141,298,272 RGD:11041788
Carney Triad term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sdha succinate dehydrogenase complex flavoprotein subunit A JBrowse link 1 31,545,631 31,570,601 RGD:8554872
G Sdhb succinate dehydrogenase complex iron sulfur subunit B JBrowse link 5 159,484,378 159,505,063 RGD:8554872
G Sdhc succinate dehydrogenase complex subunit C JBrowse link 13 89,498,047 89,518,979 RGD:8554872

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15619
    disease of cellular proliferation 5796
      Neoplasms by Histologic Type 3579
        cell type cancer 2920
          sarcoma 227
            leiomyosarcoma 16
              Carney Triad 3
              anus leiomyosarcoma 0
              bone leiomyosarcoma 0
              breast leiomyosarcoma 0
              central nervous system leiomyosarcoma 0
              colon leiomyosarcoma 0
              conventional leiomyosarcoma 0
              cutaneous leiomyosarcoma 0
              epithelioid leiomyosarcoma + 0
              esophagus leiomyosarcoma 0
              extrahepatic bile duct leiomyosarcoma 0
              fallopian tube leiomyosarcoma 0
              gallbladder leiomyosarcoma 0
              gastric leiomyosarcoma 0
              granular cell leiomyosarcoma 0
              heart leiomyosarcoma 0
              inflammatory leiomyosarcoma 0
              kidney leiomyosarcoma 0
              larynx leiomyosarcoma 0
              liver leiomyosarcoma 0
              lung leiomyosarcoma 0
              mediastinum leiomyosarcoma 0
              myxoid leiomyosarcoma + 0
              ovary leiomyosarcoma 0
              prostate leiomyosarcoma 0
              pulmonary artery leiomyosarcoma 0
              pulmonary vein leiomyosarcoma 0
              rectum leiomyosarcoma 0
              small intestine leiomyosarcoma 0
              superior vena cava leiomyosarcoma 0
              uterus leiomyosarcoma + 0
              vagina leiomyosarcoma 0
Path 2
Term Annotations click to browse term
  disease 15619
    disease of anatomical entity 14948
      nervous system disease 10216
        peripheral nervous system disease 2125
          neuropathy 1948
            neuromuscular disease 1520
              muscular disease 957
                muscle tissue disease 684
                  Muscle Tissue Neoplasms 122
                    musculoskeletal system benign neoplasm 65
                      muscle benign neoplasm 47
                        smooth muscle tumor 17
                          smooth muscle cancer 16
                            leiomyosarcoma 16
                              Carney Triad 3
                              anus leiomyosarcoma 0
                              bone leiomyosarcoma 0
                              breast leiomyosarcoma 0
                              central nervous system leiomyosarcoma 0
                              colon leiomyosarcoma 0
                              conventional leiomyosarcoma 0
                              cutaneous leiomyosarcoma 0
                              epithelioid leiomyosarcoma + 0
                              esophagus leiomyosarcoma 0
                              extrahepatic bile duct leiomyosarcoma 0
                              fallopian tube leiomyosarcoma 0
                              gallbladder leiomyosarcoma 0
                              gastric leiomyosarcoma 0
                              granular cell leiomyosarcoma 0
                              heart leiomyosarcoma 0
                              inflammatory leiomyosarcoma 0
                              kidney leiomyosarcoma 0
                              larynx leiomyosarcoma 0
                              liver leiomyosarcoma 0
                              lung leiomyosarcoma 0
                              mediastinum leiomyosarcoma 0
                              myxoid leiomyosarcoma + 0
                              ovary leiomyosarcoma 0
                              prostate leiomyosarcoma 0
                              pulmonary artery leiomyosarcoma 0
                              pulmonary vein leiomyosarcoma 0
                              rectum leiomyosarcoma 0
                              small intestine leiomyosarcoma 0
                              superior vena cava leiomyosarcoma 0
                              uterus leiomyosarcoma + 0
                              vagina leiomyosarcoma 0
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