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ONTOLOGY REPORT - ANNOTATIONS


Term:brain ischemia
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Accession:DOID:2316 term browser browse the term
Definition:Localized reduction of blood flow to brain tissue due to arterial obstruction or systemic hypoperfusion. This frequently occurs in conjunction with brain hypoxia (HYPOXIA, BRAIN). Prolonged ischemia is associated with BRAIN INFARCTION.
Synonyms:exact_synonym: Brain Ischemias;   Cerebral Hypoperfusion;   Cerebral Ischemias;   Ischaemic encephalopathy;   Ischemic Encephalopathies;   cerebral ischemia;   ischemic encephalopathy
 primary_id: MESH:D002545
 alt_id: RDO:0005166
For additional species annotation, visit the Alliance of Genome Resources.


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brain ischemia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B JBrowse link 4 22,225,123 22,307,577 RGD:1598554
G Ace angiotensin I converting enzyme JBrowse link 10 94,170,766 94,213,831 RGD:11554173
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 JBrowse link 11 25,342,119 25,350,938 RGD:9681750
G Add3 adducin 3 JBrowse link 1 273,854,195 273,961,982 RGD:11554173
G Adk adenosine kinase JBrowse link 15 3,033,535 3,435,888 RGD:6482652
RGD:6482655
G Ager advanced glycosylation end product-specific receptor JBrowse link 20 4,363,152 4,366,079 RGD:1625348
G Aif1 allograft inflammatory factor 1 JBrowse link 20 5,161,350 5,167,176 RGD:2313032
G Akap1 A-kinase anchoring protein 1 JBrowse link 10 76,151,013 76,183,987 RGD:2313128
G Akap12 A-kinase anchoring protein 12 JBrowse link 1 40,816,130 40,906,582 RGD:14348963
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:5509066
G Alb albumin JBrowse link 14 19,176,275 19,191,793 RGD:11554173
G Alox15 arachidonate 15-lipoxygenase JBrowse link 10 56,953,692 56,962,145 RGD:5509598
G Alox5 arachidonate 5-lipoxygenase JBrowse link 4 148,398,004 148,446,308 RGD:2317525
G Angpt1 angiopoietin 1 JBrowse link 7 81,338,327 81,592,459 RGD:1643339
G Angpt2 angiopoietin 2 JBrowse link 16 75,966,480 76,016,147 RGD:2314206
G Anxa1 annexin A1 JBrowse link 1 237,893,983 237,910,002 RGD:7421662
G Apaf1 apoptotic peptidase activating factor 1 JBrowse link 7 31,699,309 31,784,192 RGD:2325742
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 JBrowse link 15 27,849,943 27,852,083 RGD:2315686
G Aqp3 aquaporin 3 (Gill blood group) JBrowse link 5 57,423,735 57,429,252 RGD:5490152
G Aqp4 aquaporin 4 JBrowse link 18 6,766,009 6,782,757 RGD:5490152
G Aqp5 aquaporin 5 JBrowse link 7 141,249,044 141,252,576 RGD:5490152
G Aqp8 aquaporin 8 JBrowse link 1 193,424,818 193,430,665 RGD:5490152
G Asic1 acid sensing ion channel subunit 1 JBrowse link 7 141,324,714 141,354,937 RGD:11554173
G Bad BCL2-associated agonist of cell death JBrowse link 1 222,198,516 222,207,459 RGD:2292681
RGD:10053716
G Bbc3 Bcl-2 binding component 3 JBrowse link 1 78,261,491 78,267,802 RGD:11554173
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:11522731
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:1643491
RGD:10053716
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:11554173
G Becn1 beclin 1 JBrowse link 10 89,209,944 89,225,297 RGD:6483094
RGD:6483313
G Bmp6 bone morphogenetic protein 6 JBrowse link 17 26,955,142 27,112,820 RGD:2289024
G Btg2 BTG anti-proliferation factor 2 JBrowse link 13 50,913,185 50,916,944 RGD:2289081
G C3 complement C3 JBrowse link 9 9,721,137 9,747,084 RGD:5129543
G Casp12 caspase 12 JBrowse link 8 2,658,892 2,686,160 RGD:1299333
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:11554173
G Casp6 caspase 6 JBrowse link 2 235,341,326 235,353,715 RGD:2301331
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:11554173
G Cast calpastatin JBrowse link 2 1,452,111 1,561,669 RGD:5509813
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:5130891
RGD:11554173
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:1581152
G Ccl11 C-C motif chemokine ligand 11 JBrowse link 10 69,434,965 69,439,566 RGD:11554173
G Ccl12 chemokine (C-C motif) ligand 12 JBrowse link 10 69,476,866 69,478,416 RGD:11554173
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:2306998
RGD:11554173
G Ccl20 C-C motif chemokine ligand 20 JBrowse link 9 88,918,359 88,921,017 RGD:69987
G Ccl3 C-C motif chemokine ligand 3 JBrowse link 10 70,869,516 70,871,066 RGD:11554173
G Ccl4 C-C motif chemokine ligand 4 JBrowse link 10 70,870,926 70,886,357 RGD:11554173
G Ccr4 C-C motif chemokine receptor 4 JBrowse link 8 122,530,152 122,535,959 RGD:11554173
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:632396
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:6893498
G Cdk5 cyclin-dependent kinase 5 JBrowse link 4 7,282,945 7,287,427 RGD:734740
G Cebpb CCAAT/enhancer binding protein beta JBrowse link 3 164,424,502 164,425,933 RGD:11554173
G Chrm1 cholinergic receptor, muscarinic 1 JBrowse link 1 224,869,087 224,885,101 RGD:11554173
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 JBrowse link 1 12,823,363 12,825,806 RGD:1581188
G Clu clusterin JBrowse link 15 42,626,612 42,665,858 RGD:727237
G Cp ceruloplasmin JBrowse link 2 104,744,249 104,803,034 RGD:2314688
G Creb1 cAMP responsive element binding protein 1 JBrowse link 9 71,229,753 71,298,994 RGD:10059580
G Crh corticotropin releasing hormone JBrowse link 2 104,459,999 104,461,863 RGD:1581300
G Csf2rb colony stimulating factor 2 receptor beta common subunit JBrowse link 7 119,554,383 119,568,248 RGD:632531
G Csf3 colony stimulating factor 3 JBrowse link 10 86,616,785 86,619,160 RGD:2311241
G Cspg4 chondroitin sulfate proteoglycan 4 JBrowse link 8 61,532,465 61,567,510 RGD:5686850
G Cst3 cystatin C JBrowse link 3 143,219,671 143,223,544 RGD:2314349
G Ctsb cathepsin B JBrowse link 15 46,316,741 46,337,613 RGD:2315571
G Ctsc cathepsin C JBrowse link 1 151,918,514 151,949,979 RGD:1599640
G Ctsl cathepsin L JBrowse link 17 1,873,105 1,879,266 RGD:2315571
G Cxcl10 C-X-C motif chemokine ligand 10 JBrowse link 14 17,210,733 17,212,930 RGD:2311381
RGD:11554173
G Cxcl12 C-X-C motif chemokine ligand 12 JBrowse link 4 149,261,044 149,273,891 RGD:2306577
G Cycs cytochrome c, somatic JBrowse link 4 80,331,226 80,333,326 RGD:11554173
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:5129691
G Ddit3 DNA-damage inducible transcript 3 JBrowse link 7 70,578,564 70,585,074 RGD:1599731
G Diablo diablo, IAP-binding mitochondrial protein JBrowse link 12 38,490,230 38,503,344 RGD:11554173
G Dpysl2 dihydropyrimidinase-like 2 JBrowse link 15 43,475,640 43,581,725 RGD:2316241
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:1580883
G Dusp6 dual specificity phosphatase 6 JBrowse link 7 41,475,163 41,479,393 RGD:2316092
G Dynll1 dynein light chain LC8-type 1 JBrowse link 12 47,074,200 47,076,573 RGD:11554173
G Edn1 endothelin 1 JBrowse link 17 22,136,814 22,143,745 RGD:4144887
G Egr1 early growth response 1 JBrowse link 18 27,657,903 27,660,101 RGD:11554173
G Endog endonuclease G JBrowse link 3 8,741,833 8,744,414 RGD:9685367
G Epor erythropoietin receptor JBrowse link 8 22,969,737 22,974,468 RGD:11041652
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:8694344
G F2 coagulation factor II JBrowse link 3 80,529,468 80,542,993 RGD:11554173
G F2r coagulation factor II (thrombin) receptor JBrowse link 2 26,118,760 26,135,340 RGD:1302269
G F5 coagulation factor V JBrowse link 13 82,479,997 82,535,540 RGD:11554173
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:1600333
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:2311437
G Fga fibrinogen alpha chain JBrowse link 2 181,997,562 182,013,726 RGD:11040923
G Fgf1 fibroblast growth factor 1 JBrowse link 18 32,273,830 32,359,831 RGD:5509879
RGD:5509881
G Gal galanin and GMAP prepropeptide JBrowse link 1 218,653,059 218,657,922 RGD:1624341
G Gc GC, vitamin D binding protein JBrowse link 14 20,267,023 20,302,577 RGD:1625796
G Gfra1 GDNF family receptor alpha 1 JBrowse link 1 279,203,046 279,572,789 RGD:6218981
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:6480433
G Glud1 glutamate dehydrogenase 1 JBrowse link 16 10,661,486 10,695,557 RGD:6484655
G Gpx1 glutathione peroxidase 1 JBrowse link 8 117,117,430 117,118,528 RGD:11554173
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:1626331
RGD:11554173
RGD:9068895
RGD:9068892
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:1582709
RGD:10755576
G Hspa1b heat shock protein family A (Hsp70) member 1B JBrowse link 20 4,877,638 4,880,112 RGD:1626649
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:6480229
G Hspa9 heat shock protein family A (Hsp70) member 9 JBrowse link 18 27,731,072 27,749,235 RGD:6784525
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:11554173
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:1598411
RGD:2306694
G Il10rb interleukin 10 receptor subunit beta JBrowse link 11 31,560,301 31,582,457 RGD:11554173
G Il12rb1 interleukin 12 receptor subunit beta 1 JBrowse link 16 20,370,722 20,383,576 RGD:11554173
G Il17a interleukin 17A JBrowse link 9 26,841,299 26,844,786 RGD:4846398
RGD:11554173
G Il17ra interleukin 17 receptor A JBrowse link 4 152,995,865 153,018,394 RGD:11554173
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:4889510
RGD:11554173
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:11554173
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:11554173
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:11554173
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:11554173
G Il6st interleukin 6 signal transducer JBrowse link 2 44,279,199 44,319,427 RGD:1627568
G Irak1 interleukin-1 receptor-associated kinase 1 JBrowse link X 156,716,469 156,726,367 RGD:7495802
G Irak4 interleukin-1 receptor-associated kinase 4 JBrowse link 7 135,803,723 135,831,006 RGD:7495802
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:11554173
G Kcnk10 potassium two pore domain channel subfamily K member 10 JBrowse link 6 122,417,079 122,549,532 RGD:9831167
G Kcnk2 potassium two pore domain channel subfamily K member 2 JBrowse link 13 107,690,111 107,886,476 RGD:9831127
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:5684407
G Lgals3 galectin 3 JBrowse link 15 24,153,602 24,165,537 RGD:9685227
G Lif LIF, interleukin 6 family cytokine JBrowse link 14 84,482,652 84,500,574 RGD:2326053
G Lonp1 lon peptidase 1, mitochondrial JBrowse link 9 10,428,853 10,441,180 RGD:633879
G Map2 microtubule-associated protein 2 JBrowse link 9 73,204,753 73,462,965 RGD:6483082
G Map2k1 mitogen activated protein kinase kinase 1 JBrowse link 8 69,134,218 69,722,573 RGD:1582169
RGD:11554173
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:1582281
RGD:11554173
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:11554173
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 16 9,620,854 9,709,342 RGD:1582325
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:1599927
G Mdh2 malate dehydrogenase 2 JBrowse link 12 23,941,451 23,954,406 RGD:1582465
G Mdk midkine JBrowse link 3 80,841,003 80,843,895 RGD:1582476
G Mmp13 matrix metallopeptidase 13 JBrowse link 8 5,522,739 5,533,018 RGD:1582554
G Mmp14 matrix metallopeptidase 14 JBrowse link 15 33,074,441 33,083,666 RGD:1582577
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:1582577
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:1582611
RGD:11554173
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:11554173
G Msi1 musashi RNA-binding protein 1 JBrowse link 12 46,899,835 46,935,335 RGD:633285
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:11554173
G Naip6 NLR family, apoptosis inhibitory protein 6 JBrowse link 2 30,377,505 30,418,578 RGD:2317254
G Nes nestin JBrowse link 2 187,343,109 187,352,972 RGD:1642071
G Nfkb1 nuclear factor kappa B subunit 1 JBrowse link 2 240,773,520 240,890,053 RGD:11554173
G Nfkbia NFKB inhibitor alpha JBrowse link 6 76,267,227 76,270,457 RGD:11554173
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:1642142
RGD:6480433
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:11554173
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:4891961
RGD:2292134
G Nox4 NADPH oxidase 4 JBrowse link 1 150,796,359 150,976,186 RGD:1580980
G Nppa natriuretic peptide A JBrowse link 5 164,808,407 164,809,716 RGD:1626244
G Nptxr neuronal pentraxin receptor JBrowse link 7 121,011,678 121,029,754 RGD:1642302
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 JBrowse link 18 31,728,373 32,704,022 RGD:4892115
G Nrf1 nuclear respiratory factor 1 JBrowse link 4 57,335,732 57,445,317 RGD:2302400
G Oprm1 opioid receptor, mu 1 JBrowse link 1 43,454,803 43,704,948 RGD:2316630
G Pak1 p21 (RAC1) activated kinase 1 JBrowse link 1 162,768,156 162,883,356 RGD:2299171
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:11554173
G Pcna proliferating cell nuclear antigen JBrowse link 3 124,880,698 124,884,570 RGD:729592
G Pgf placental growth factor JBrowse link 6 108,994,016 109,004,598 RGD:6483783
G Pla2g4a phospholipase A2 group IVA JBrowse link 13 67,062,252 67,206,688 RGD:1642465
G Plat plasminogen activator, tissue type JBrowse link 16 74,098,263 74,122,897 RGD:1580879
RGD:11554173
G Plau plasminogen activator, urokinase JBrowse link 15 3,644,296 3,650,765 RGD:11554173
G Ppid peptidylprolyl isomerase D JBrowse link 2 178,354,830 178,366,843 RGD:1580699
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A JBrowse link 1 101,511,899 101,515,043 RGD:9999408
G Prkaca protein kinase cAMP-activated catalytic subunit alpha JBrowse link 19 25,095,089 25,118,869 RGD:7327190
G Prkacb protein kinase cAMP-activated catalytic subunit beta JBrowse link 2 252,602,197 252,691,886 RGD:7327190
G Prkca protein kinase C, alpha JBrowse link 10 96,186,509 96,585,168 RGD:2293301
G Prkcd protein kinase C, delta JBrowse link 16 6,655,131 6,675,746 RGD:1642524
G Proz protein Z, vitamin K-dependent plasma glycoprotein JBrowse link 16 81,784,348 81,797,889 RGD:1358564
G Ptgis prostaglandin I2 synthase JBrowse link 3 163,950,746 163,986,129 RGD:8693629
G Ptgs1 prostaglandin-endoperoxide synthase 1 JBrowse link 3 15,560,685 15,582,339 RGD:5688240
RGD:5688247
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:6480433
RGD:11554173
RGD:5688292
RGD:1581286
G Ptk2b protein tyrosine kinase 2 beta JBrowse link 15 42,827,306 42,947,796 RGD:1642647
G Rb1 RB transcriptional corepressor 1 JBrowse link 15 55,081,582 55,209,060 RGD:11554173
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link 1 220,992,770 221,003,249 RGD:11554173
G Ret ret proto-oncogene JBrowse link 4 150,202,170 150,249,196 RGD:6218981
G S100b S100 calcium binding protein B JBrowse link 20 13,130,633 13,142,856 RGD:5508764
G Scn5a sodium voltage-gated channel alpha subunit 5 JBrowse link 8 128,169,191 128,266,681 RGD:6484225
G Sele selectin E JBrowse link 13 82,355,234 82,365,323 RGD:2313600
RGD:11554173
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:11073613
G Slc11a2 solute carrier family 11 member 2 JBrowse link 7 142,025,812 142,062,892 RGD:5688411
G Slc29a1 solute carrier family 29 member 1 JBrowse link 9 17,784,468 17,799,008 RGD:2316942
G Slc6a1 solute carrier family 6 member 1 JBrowse link 4 146,258,842 146,292,176 RGD:1643209
G Slc8a1 solute carrier family 8 member A1 JBrowse link 6 4,244,076 4,564,262 RGD:1642717
RGD:6771236
RGD:727449
G Slc8a2 solute carrier family 8 member A2 JBrowse link 1 78,029,555 78,054,042 RGD:2316979
G Slc8a3 solute carrier family 8 member A3 JBrowse link 6 104,889,500 105,099,408 RGD:2316979
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:11554173
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:1625695
RGD:11554173
G Sod3 superoxide dismutase 3 JBrowse link 14 60,958,583 60,971,143 RGD:1580852
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:1581411
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:11554173
G Tek TEK receptor tyrosine kinase JBrowse link 5 113,725,717 113,852,799 RGD:634324
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:2302105
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:5129691
G Tjp1 tight junction protein 1 JBrowse link 1 126,146,489 126,515,359 RGD:2325131
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:1580737
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:11554173
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:1624184
RGD:11554173
G Tnfrsf1b TNF receptor superfamily member 1B JBrowse link 5 163,136,390 163,167,299 RGD:11554173
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:11554173
G Ttr transthyretin JBrowse link 18 15,532,963 15,542,180 RGD:1580523
G Ucp2 uncoupling protein 2 JBrowse link 1 165,506,375 165,512,744 RGD:11554173
G Vip vasoactive intestinal peptide JBrowse link 1 42,169,307 42,177,582 RGD:5685617
G Ywhab tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta JBrowse link 3 160,391,108 160,399,931 RGD:2306031
brain infarction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link 11 81,330,845 81,344,488 RGD:5686830
G Adk adenosine kinase JBrowse link 15 3,033,535 3,435,888 RGD:6482657
RGD:6482667
G Adm adrenomedullin JBrowse link 1 175,443,189 175,447,260 RGD:5508764
G Adnp activity-dependent neuroprotector homeobox JBrowse link 3 164,937,188 164,964,819 RGD:1358226
G Aif1 allograft inflammatory factor 1 JBrowse link 20 5,161,350 5,167,176 RGD:2313025
RGD:2313026
G Aldh2 aldehyde dehydrogenase 2 family member JBrowse link 12 40,466,418 40,498,813 RGD:1601161
G Alox5ap arachidonate 5-lipoxygenase activating protein JBrowse link 12 6,854,930 6,879,112 RGD:2311309
G Becn1 beclin 1 JBrowse link 10 89,209,944 89,225,297 RGD:6483057
G Cfh complement factor H JBrowse link 13 56,979,155 57,080,540 RGD:5508764
G Ctsb cathepsin B JBrowse link 15 46,316,741 46,337,613 RGD:2315502
G Cybb cytochrome b-245 beta chain JBrowse link X 14,578,330 14,610,049 RGD:11554173
G Ece1 endothelin converting enzyme 1 JBrowse link 5 156,215,469 156,318,652 RGD:1580908
G Fgf2 fibroblast growth factor 2 JBrowse link 2 124,081,072 124,134,133 RGD:11554173
G Gpr17 G protein-coupled receptor 17 JBrowse link 18 24,733,306 24,739,194 RGD:11554173
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:8548626
G Hnmt histamine N-methyltransferase JBrowse link 3 905,111 937,038 RGD:5509772
RGD:5509773
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:2313474
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:5509999
G Il15 interleukin 15 JBrowse link 19 23,542,606 23,624,366 RGD:1626610
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:1626644
G Mdk midkine JBrowse link 3 80,841,003 80,843,895 RGD:1582478
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:1582617
G Msi1 musashi RNA-binding protein 1 JBrowse link 12 46,899,835 46,935,335 RGD:1582664
G Nes nestin JBrowse link 2 187,343,109 187,352,972 RGD:1642069
G Parg poly (ADP-ribose) glycohydrolase JBrowse link 16 8,350,168 8,457,999 RGD:2316742
G Pdgfb platelet derived growth factor subunit B JBrowse link 7 121,215,458 121,233,092 RGD:1581758
G Plat plasminogen activator, tissue type JBrowse link 16 74,098,263 74,122,897 RGD:11554173
G RT1-Ba RT1 class II, locus Ba JBrowse link 20 4,066,133 4,070,726 RGD:5147807
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:11554173
G Tbxas1 thromboxane A synthase 1 JBrowse link 4 66,624,181 66,846,745 RGD:1601455
Cerebral Autosomal Recessive Arteriopathy with Subcortical Infarcts and Leukoencephalopathy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Htra1 HtrA serine peptidase 1 JBrowse link 1 201,499,067 201,548,508 RGD:7240710
RGD:8554872
cerebral infarction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G A2m alpha-2-macroglobulin JBrowse link 4 154,309,426 154,359,138 RGD:13702087
G Ace angiotensin I converting enzyme JBrowse link 10 94,170,766 94,213,831 RGD:11038922
RGD:8554872
G Adora1 adenosine A1 receptor JBrowse link 13 51,042,111 51,076,913 RGD:1625229
G Ager advanced glycosylation end product-specific receptor JBrowse link 20 4,363,152 4,366,079 RGD:8696004
G Alox5ap arachidonate 5-lipoxygenase activating protein JBrowse link 12 6,854,930 6,879,112 RGD:7240710
G Ang angiogenin JBrowse link 15 28,022,926 28,028,636 RGD:6892714
G Anxa1 annexin A1 JBrowse link 1 237,893,983 237,910,002 RGD:7483559
G Apoa5 apolipoprotein A5 JBrowse link 8 50,559,079 50,561,720 RGD:2313314
G Apob apolipoprotein B JBrowse link 6 33,176,826 33,216,381 RGD:2313973
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:1601237
G Brinp3 BMP/retinoic acid inducible neural specific 3 JBrowse link 13 63,526,486 63,959,390 RGD:14398486
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:8552262
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:6893487
G Ephx2 epoxide hydrolase 2 JBrowse link 15 42,757,241 42,794,211 RGD:1580986
G F2 coagulation factor II JBrowse link 3 80,529,468 80,542,993 RGD:7240710
RGD:8554872
G F5 coagulation factor V JBrowse link 13 82,479,997 82,535,540 RGD:7240710
RGD:8554872
G F7 coagulation factor VII JBrowse link 16 81,824,610 81,834,923 RGD:11049518
RGD:11049520
G Fbn1 fibrillin 1 JBrowse link 3 117,569,708 117,766,160 RGD:8554872
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 JBrowse link 3 2,507,745 2,534,664 RGD:13792693
G Grn granulin precursor JBrowse link 10 90,377,103 90,383,207 RGD:8554872
G Hba-a2 hemoglobin alpha, adult chain 2 JBrowse link 10 15,589,364 15,590,207 RGD:11554173
G Hmgb1 high mobility group box 1 JBrowse link 12 7,082,529 7,090,246 RGD:8696004
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:10755574
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:8547724
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:8655991
G Itga9 integrin subunit alpha 9 JBrowse link 8 127,271,029 127,576,709 RGD:13602007
G Lipg lipase G, endothelial type JBrowse link 18 70,903,528 70,924,434 RGD:1601237
G Lta lymphotoxin alpha JBrowse link 20 4,851,889 4,854,677 RGD:1580416
G Map2 microtubule-associated protein 2 JBrowse link 9 73,204,753 73,462,965 RGD:6483079
G Map3k5 mitogen-activated protein kinase kinase kinase 5 JBrowse link 1 15,412,603 15,613,752 RGD:10412642
G Mt-co2 mitochondrially encoded cytochrome c oxidase II JBrowse link MT 7,006 7,689 RGD:8554872
G Mt-cyb mitochondrially encoded cytochrome b JBrowse link MT 14,136 15,278 RGD:8554872
G Mthfr methylenetetrahydrofolate reductase JBrowse link 5 164,844,642 164,864,360 RGD:1580590
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:7240710
RGD:8554872
G Notch3 notch receptor 3 JBrowse link 7 14,138,495 14,189,688 RGD:8554872
G Npy neuropeptide Y JBrowse link 4 79,557,856 79,565,059 RGD:10448931
RGD:11554173
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:13462069
G Pdx1 pancreatic and duodenal homeobox 1 JBrowse link 12 9,496,044 9,501,211 RGD:2311309
G Pla2g7 phospholipase A2 group VII JBrowse link 9 19,935,754 19,978,013 RGD:6482775
G Plat plasminogen activator, tissue type JBrowse link 16 74,098,263 74,122,897 RGD:11554173
G Plau plasminogen activator, urokinase JBrowse link 15 3,644,296 3,650,765 RGD:11554173
G Plaur plasminogen activator, urokinase receptor JBrowse link 1 81,328,171 81,344,954 RGD:6483804
G Pon1 paraoxonase 1 JBrowse link 4 30,249,749 30,276,297 RGD:1580196
G Prkch protein kinase C, eta JBrowse link 6 96,479,243 96,677,368 RGD:7240710
G Pros1 protein S JBrowse link 7 1,206,648 1,288,140 RGD:11250416
G Ptgdr prostaglandin D2 receptor JBrowse link 15 19,195,606 19,196,508 RGD:2316816
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:11075081
G Serping1 serpin family G member 1 JBrowse link 3 72,161,230 72,171,109 RGD:8661653
G Slc6a1 solute carrier family 6 member 1 JBrowse link 4 146,258,842 146,292,176 RGD:1643205
G Tbxas1 thromboxane A synthase 1 JBrowse link 4 66,624,181 66,846,745 RGD:11059536
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:1580315
G Tnfrsf11b TNF receptor superfamily member 11B JBrowse link 7 93,798,580 93,826,586 RGD:7205492
G Tomm40 translocase of outer mitochondrial membrane 40 JBrowse link 1 80,617,749 80,630,253 RGD:13464126
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:11554173
G Vim vimentin JBrowse link 17 80,882,715 80,891,200 RGD:6480442
Chronic Cerebral Hypoperfusion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aco1 aconitase 1 JBrowse link 5 56,425,076 56,481,218 RGD:11541085
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:13703133
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:10054250
G Bace1 beta-secretase 1 JBrowse link 8 50,140,092 50,162,388 RGD:13782142
G Bnip3l BCL2 interacting protein 3 like JBrowse link 15 43,643,897 43,667,123 RGD:10402542
G Dag1 dystroglycan 1 JBrowse link 8 116,980,501 116,993,182 RGD:11541061
G Fth1 ferritin heavy chain 1 JBrowse link 1 226,030,940 226,033,228 RGD:11541085
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:10401930
G Hcn1 hyperpolarization-activated cyclic nucleotide-gated potassium channel 1 JBrowse link 2 50,099,576 50,499,799 RGD:9686415
G Hcn2 hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 JBrowse link 7 12,851,730 12,870,087 RGD:9686415
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:10402542
G Map3k5 mitogen-activated protein kinase kinase kinase 5 JBrowse link 1 15,412,603 15,613,752 RGD:10412307
G Mapk14 mitogen activated protein kinase 14 JBrowse link 20 5,933,290 5,995,137 RGD:10412307
G Mcm2 minichromosome maintenance complex component 2 JBrowse link 4 120,825,699 120,840,221 RGD:10412049
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:13824977
G Tfrc transferrin receptor JBrowse link 11 71,397,423 71,419,263 RGD:11541085
Hypoxia-Ischemia, Brain term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adnp activity-dependent neuroprotector homeobox JBrowse link 3 164,937,188 164,964,819 RGD:2312775
G Agtr2 angiotensin II receptor, type 2 JBrowse link X 119,389,480 119,393,845 RGD:6903872
G Aif1 allograft inflammatory factor 1 JBrowse link 20 5,161,350 5,167,176 RGD:2313021
G Aifm1 apoptosis inducing factor, mitochondria associated 1 JBrowse link X 135,304,063 135,343,062 RGD:10053564
RGD:13524865
G Arntl aryl hydrocarbon receptor nuclear translocator-like JBrowse link 1 178,039,002 178,137,469 RGD:10043348
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:10054502
RGD:13782292
G Bcan brevican JBrowse link 2 187,359,674 187,373,133 RGD:14392799
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:10054502
RGD:13782292
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:10053669
G Becn1 beclin 1 JBrowse link 10 89,209,944 89,225,297 RGD:6483050
RGD:11558017
G Bmp4 bone morphogenetic protein 4 JBrowse link 15 20,776,060 20,791,013 RGD:8699519
G Casp1 caspase 1 JBrowse link 8 2,605,743 2,614,637 RGD:13782359
G Casp12 caspase 12 JBrowse link 8 2,658,892 2,686,160 RGD:2311455
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:2311455
RGD:13782359
RGD:13782292
RGD:13782279
RGD:10054502
G Casp8 caspase 8 JBrowse link 9 65,614,142 65,662,624 RGD:13782292
RGD:13782359
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:13782359
G Cast calpastatin JBrowse link 2 1,452,111 1,561,669 RGD:5683321
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:9068474
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:8549543
G Ccr2 C-C motif chemokine receptor 2 RGD:4144890
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:4890442
G Cdk5r1 cyclin-dependent kinase 5 regulatory subunit 1 JBrowse link 10 67,862,054 67,863,255 RGD:13782373
G Clock clock circadian regulator JBrowse link 14 34,418,226 34,502,218 RGD:10043348
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase JBrowse link 10 88,490,798 88,497,357 RGD:6483337
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:9585994
G Cxcr3 C-X-C motif chemokine receptor 3 JBrowse link X 71,614,346 71,616,997 RGD:2311381
G Daxx death-domain associated protein JBrowse link 20 5,480,103 5,485,962 RGD:9587791
G Dnmt3a DNA methyltransferase 3 alpha JBrowse link 6 28,205,375 28,346,052 RGD:9588620
G Egr1 early growth response 1 JBrowse link 18 27,657,903 27,660,101 RGD:2289081
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha JBrowse link 6 102,048,372 102,073,041 RGD:10395352
G Epha4 Eph receptor A4 JBrowse link 9 83,111,222 83,253,486 RGD:5688765
G Epo erythropoietin JBrowse link 12 22,274,828 22,278,268 RGD:10400911
RGD:10401072
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha JBrowse link 15 19,619,947 19,655,381 RGD:632668
G Fadd Fas associated via death domain JBrowse link 1 217,746,176 217,748,581 RGD:13782292
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:9587791
G Foxo3 forkhead box O3 JBrowse link 20 46,428,078 46,519,156 RGD:10402203
G Ghr growth hormone receptor JBrowse link 2 53,149,225 53,413,954 RGD:2315620
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 JBrowse link 3 2,507,745 2,534,664 RGD:2325954
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A JBrowse link 10 5,707,806 6,123,568 RGD:2325954
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B JBrowse link 4 169,541,620 170,000,216 RGD:2325954
G Hcn1 hyperpolarization-activated cyclic nucleotide-gated potassium channel 1 JBrowse link 2 50,099,576 50,499,799 RGD:9686395
G Hdac3 histone deacetylase 3 JBrowse link 18 31,073,057 31,094,347 RGD:9588620
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:9068873
RGD:11554173
RGD:9068901
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:10766440
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link 20 4,875,834 4,881,751 RGD:7257595
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:8549456
RGD:12904932
RGD:10046049
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:5510005
G Igfbp3 insulin-like growth factor binding protein 3 JBrowse link 14 87,457,647 87,465,374 RGD:10402756
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:7204438
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:12792241
G Irak1 interleukin-1 receptor-associated kinase 1 JBrowse link X 156,716,469 156,726,367 RGD:11554173
G Irak4 interleukin-1 receptor-associated kinase 4 JBrowse link 7 135,803,723 135,831,006 RGD:11554173
G Ireb2 iron responsive element binding protein 2 JBrowse link 8 59,450,974 59,503,634 RGD:12903962
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:5684383
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha JBrowse link 3 150,801,289 150,802,935 RGD:11558017
G Map2 microtubule-associated protein 2 JBrowse link 9 73,204,753 73,462,965 RGD:6483088
G Map3k5 mitogen-activated protein kinase kinase kinase 5 JBrowse link 1 15,412,603 15,613,752 RGD:9587791
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:13782373
G Mbd2 methyl-CpG binding domain protein 2 JBrowse link 18 65,814,026 65,885,115 RGD:9588620
G Mbp myelin basic protein JBrowse link 18 79,326,738 79,437,310 RGD:7327196
G Mmp3 matrix metallopeptidase 3 JBrowse link 8 5,676,608 5,698,579 RGD:8694100
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:11554173
G Ntrk1 neurotrophic receptor tyrosine kinase 1 JBrowse link 2 187,143,568 187,160,373 RGD:5684358
G Pdgfb platelet derived growth factor subunit B JBrowse link 7 121,215,458 121,233,092 RGD:10449494
G Plat plasminogen activator, tissue type JBrowse link 16 74,098,263 74,122,897 RGD:6483831
G Plau plasminogen activator, urokinase JBrowse link 15 3,644,296 3,650,765 RGD:2316117
RGD:6483831
G Ppp1r1b protein phosphatase 1, regulatory (inhibitor) subunit 1B JBrowse link 10 86,303,727 86,312,770 RGD:13515077
G Ptpn5 protein tyrosine phosphatase, non-receptor type 5 JBrowse link 1 103,197,918 103,258,309 RGD:9835021
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 JBrowse link 4 49,941,046 50,140,764 RGD:9590116
G Rnf146 ring finger protein 146 JBrowse link 1 30,856,923 30,873,814 RGD:13524865
G S100b S100 calcium binding protein B JBrowse link 20 13,130,633 13,142,856 RGD:5508819
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:2316117
G Slc9a1 solute carrier family 9 member A1 JBrowse link 5 151,573,122 151,626,360 RGD:6771331
G Spi1 Spi-1 proto-oncogene JBrowse link 3 79,918,127 79,937,708 RGD:9586724
G Tert telomerase reverse transcriptase JBrowse link 1 32,250,876 32,275,330 RGD:11038672
G Tf transferrin JBrowse link 8 111,694,570 111,721,275 RGD:7244383
G Tfam transcription factor A, mitochondrial JBrowse link 20 18,594,057 18,606,106 RGD:2302400
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:11554173
lateral medullary syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fshb follicle stimulating hormone subunit beta JBrowse link 3 98,088,321 98,092,131 RGD:11554173
middle cerebral artery infarction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc8 ATP binding cassette subfamily C member 8 JBrowse link 1 102,110,708 102,191,287 RGD:12790979
RGD:12791996
G Ace angiotensin I converting enzyme JBrowse link 10 94,170,766 94,213,831 RGD:11039026
G Ace2 angiotensin I converting enzyme 2 JBrowse link X 32,050,734 32,095,860 RGD:9685436
G Adora1 adenosine A1 receptor JBrowse link 13 51,042,111 51,076,913 RGD:11554173
G Ager advanced glycosylation end product-specific receptor JBrowse link 20 4,363,152 4,366,079 RGD:8696008
G Agt angiotensinogen JBrowse link 19 57,321,594 57,333,460 RGD:9685436
G Aifm1 apoptosis inducing factor, mitochondria associated 1 JBrowse link X 135,304,063 135,343,062 RGD:10047403
G Ak1 adenylate kinase 1 JBrowse link 3 11,652,143 11,659,135 RGD:5508760
G Alb albumin JBrowse link 14 19,176,275 19,191,793 RGD:11036100
G Alox5 arachidonate 5-lipoxygenase JBrowse link 4 148,398,004 148,446,308 RGD:11554173
G Ap2b1 adaptor related protein complex 2 subunit beta 1 JBrowse link 10 70,516,462 70,621,973 RGD:13461853
G Apaf1 apoptotic peptidase activating factor 1 JBrowse link 7 31,699,309 31,784,192 RGD:13703113
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:6903926
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:13782054
G Aqp4 aquaporin 4 JBrowse link 18 6,766,009 6,782,757 RGD:8695955
G Arc activity-regulated cytoskeleton-associated protein JBrowse link 7 115,907,097 115,911,059 RGD:10395314
G Atf3 activating transcription factor 3 JBrowse link 13 109,817,892 109,849,632 RGD:11554173
G Bad BCL2-associated agonist of cell death JBrowse link 1 222,198,516 222,207,459 RGD:10053665
RGD:10053704
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:10054501
G Bcan brevican JBrowse link 2 187,359,674 187,373,133 RGD:9590118
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:10054501
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:4891138
G Becn1 beclin 1 JBrowse link 10 89,209,944 89,225,297 RGD:11561900
G Bnip3 BCL2 interacting protein 3 JBrowse link 1 211,248,098 211,265,282 RGD:9685412
G Bnip3l BCL2 interacting protein 3 like JBrowse link 15 43,643,897 43,667,123 RGD:2314138
RGD:9068917
G C3 complement C3 JBrowse link 9 9,721,137 9,747,084 RGD:7175514
RGD:11554173
G Camk2a calcium/calmodulin-dependent protein kinase II alpha JBrowse link 18 56,193,978 56,295,869 RGD:1358416
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:10053704
RGD:13782346
RGD:10054501
G Casp6 caspase 6 JBrowse link 2 235,341,326 235,353,715 RGD:13782346
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:13782346
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:11554173
G Ccl7 C-C motif chemokine ligand 7 JBrowse link 10 69,423,083 69,424,933 RGD:11554173
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:11041113
G Cd86 CD86 molecule JBrowse link 11 67,060,305 67,117,990 RGD:2313025
G Cdk5 cyclin-dependent kinase 5 JBrowse link 4 7,282,945 7,287,427 RGD:13782375
G Cldn5 claudin 5 JBrowse link 11 86,356,292 86,357,718 RGD:13204729
G Crh corticotropin releasing hormone JBrowse link 2 104,459,999 104,461,863 RGD:5490538
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:9585995
G Crtc1 CREB regulated transcription coactivator 1 JBrowse link 16 20,740,746 20,798,145 RGD:4891138
G Csf3 colony stimulating factor 3 JBrowse link 10 86,616,785 86,619,160 RGD:11039420
RGD:11039425
G Cxcl10 C-X-C motif chemokine ligand 10 JBrowse link 14 17,210,733 17,212,930 RGD:632989
G Cxcl2 C-X-C motif chemokine ligand 2 JBrowse link 14 18,731,346 18,733,391 RGD:11554173
G Cxcr2 C-X-C motif chemokine receptor 2 JBrowse link 9 81,427,275 81,435,065 RGD:11554173
G Cxcr3 C-X-C motif chemokine receptor 3 JBrowse link X 71,614,346 71,616,997 RGD:632989
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:14700877
G Dnmt1 DNA methyltransferase 1 JBrowse link 8 21,922,515 21,968,495 RGD:9588643
G Dnmt3a DNA methyltransferase 3 alpha JBrowse link 6 28,205,375 28,346,052 RGD:9589049
G Dynll1 dynein light chain LC8-type 1 JBrowse link 12 47,074,200 47,076,573 RGD:13208524
G Edn1 endothelin 1 JBrowse link 17 22,136,814 22,143,745 RGD:11554173
G Egr1 early growth response 1 JBrowse link 18 27,657,903 27,660,101 RGD:10395314
G Egr2 early growth response 2 JBrowse link 20 22,452,170 22,461,018 RGD:10395314
G Egr4 early growth response 4 JBrowse link 4 117,293,620 117,296,082 RGD:10395314
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha JBrowse link 6 102,048,372 102,073,041 RGD:10395346
RGD:10755569
G Elane elastase, neutrophil expressed JBrowse link 7 12,638,320 12,640,168 RGD:10450546
G Eng endoglin JBrowse link 3 11,679,530 11,717,486 RGD:11041171
G Epcam epithelial cell adhesion molecule JBrowse link 6 11,282,194 11,308,870 RGD:11038820
G Epn1 Epsin 1 JBrowse link 1 72,294,153 72,310,217 RGD:13461853
G Epo erythropoietin JBrowse link 12 22,274,828 22,278,268 RGD:10400898
RGD:10401066
G Ercc6 ERCC excision repair 6, chromatin remodeling factor JBrowse link 16 8,734,028 8,804,610 RGD:10401103
G F11 coagulation factor XI JBrowse link 16 50,179,458 50,201,644 RGD:11041786
G F12 coagulation factor XII JBrowse link 17 9,736,577 9,744,420 RGD:11041786
G Fadd Fas associated via death domain JBrowse link 1 217,746,176 217,748,581 RGD:11341807
RGD:11344885
G Fgf21 fibroblast growth factor 21 JBrowse link 1 101,595,579 101,596,822 RGD:11554173
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:11554173
G Gabra6 gamma-aminobutyric acid type A receptor alpha 6 subunit JBrowse link 10 27,847,447 27,862,896 RGD:11554173
G Gapdh glyceraldehyde-3-phosphate dehydrogenase JBrowse link 4 157,676,336 157,680,322 RGD:13792686
G Ghrl ghrelin and obestatin prepropeptide JBrowse link 4 145,674,157 145,678,066 RGD:9850083
G Ghsr growth hormone secretagogue receptor JBrowse link 2 113,065,953 113,071,265 RGD:9850083
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 JBrowse link 3 2,507,745 2,534,664 RGD:11068571
G Grn granulin precursor JBrowse link 10 90,377,103 90,383,207 RGD:10401661
G Grpel1 GrpE-like 1, mitochondrial JBrowse link 14 79,458,951 79,464,782 RGD:632868
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:13792734
G Hamp hepcidin antimicrobial peptide JBrowse link 1 89,368,021 89,369,960 RGD:11041635
G Has2 hyaluronan synthase 2 JBrowse link 7 96,438,046 96,464,049 RGD:9588631
G Hdac4 histone deacetylase 4 JBrowse link 9 99,052,945 99,299,715 RGD:9681449
G Hdac5 histone deacetylase 5 JBrowse link 10 90,140,183 90,169,853 RGD:9681449
G Hdac9 histone deacetylase 9 JBrowse link 6 53,487,367 54,358,694 RGD:9681449
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:9068917
G Hmgb1 high mobility group box 1 JBrowse link 12 7,082,529 7,090,246 RGD:9681449
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:10755587
RGD:10755755
RGD:10755588
G Hp haptoglobin JBrowse link 19 42,096,255 42,100,805 RGD:7175514
G Hspa4 heat shock protein family A (Hsp70) member 4 JBrowse link 10 38,601,624 38,642,397 RGD:5688754
RGD:6218961
G Hspd1 heat shock protein family D (Hsp60) member 1 JBrowse link 9 61,680,529 61,691,202 RGD:11554173
G Htra2 HtrA serine peptidase 2 JBrowse link 4 113,883,671 113,886,833 RGD:2314385
RGD:5688372
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:11554173
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:11554173
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta JBrowse link 16 74,177,233 74,230,809 RGD:10045955
G Il11 interleukin 11 JBrowse link 1 72,636,959 72,643,255 RGD:11554173
G Il13 interleukin 13 JBrowse link 10 38,982,909 38,985,466 RGD:7204480
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:7204480
RGD:13792833
RGD:11554173
RGD:10450594
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:8551708
G Il22 interleukin 22 JBrowse link 7 61,236,037 61,240,502 RGD:11554173
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:7204480
G Il5 interleukin 5 JBrowse link 10 39,066,716 39,069,587 RGD:7204480
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:11554173
RGD:13792833
G Il6r interleukin 6 receptor JBrowse link 2 189,196,180 189,255,987 RGD:11554173
G Il6st interleukin 6 signal transducer JBrowse link 2 44,279,199 44,319,427 RGD:11554173
G Irf4 interferon regulatory factor 4 JBrowse link 17 34,886,746 34,905,191 RGD:11530061
G Junb JunB proto-oncogene, AP-1 transcription factor subunit JBrowse link 19 26,092,972 26,094,756 RGD:11554173
G Mag myelin-associated glycoprotein JBrowse link 1 89,345,325 89,360,905 RGD:9685232
G Mapk1 mitogen activated protein kinase 1 JBrowse link 11 88,203,863 88,273,301 RGD:13800881
G Mapk3 mitogen activated protein kinase 3 JBrowse link 1 198,192,773 198,198,975 RGD:13800881
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:13800886
RGD:13800913
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:11554173
RGD:13204729
G Mt3 metallothionein 3 JBrowse link 19 11,324,708 11,326,112 RGD:9685807
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:10040971
RGD:10041016
RGD:10040974
G Nae1 NEDD8 activating enzyme E1 subunit 1 JBrowse link 19 653,510 680,378 RGD:13801046
G Nampt nicotinamide phosphoribosyltransferase JBrowse link 6 52,122,085 52,156,473 RGD:13781880
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:10412696
RGD:10412714
G Nfkbia NFKB inhibitor alpha JBrowse link 6 76,267,227 76,270,457 RGD:10413868
G Ngf nerve growth factor JBrowse link 2 204,886,158 204,939,523 RGD:11554173
G Ngfr nerve growth factor receptor JBrowse link 10 83,389,828 83,408,061 RGD:10413900
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:13204729
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:5508751
RGD:5509037
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link 19 38,422,210 38,437,103 RGD:5133239
RGD:11035212
G Nrg1 neuregulin 1 JBrowse link 16 62,969,573 64,065,063 RGD:10449015
G Ogg1 8-oxoguanine DNA glycosylase JBrowse link 4 145,282,828 145,289,367 RGD:8657395
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:13463450
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:5683909
RGD:13792686
RGD:10054501
RGD:11073732
G Pawr pro-apoptotic WT1 regulator JBrowse link 7 51,273,764 51,353,700 RGD:9835380
RGD:9850083
RGD:9835381
G Pdgfra platelet derived growth factor receptor alpha JBrowse link 14 35,527,926 35,581,130 RGD:11084934
G Pdgfrb platelet derived growth factor receptor beta JBrowse link 18 56,364,586 56,406,381 RGD:11084934
G Plat plasminogen activator, tissue type JBrowse link 16 74,098,263 74,122,897 RGD:1580876
RGD:11554173
G Plau plasminogen activator, urokinase JBrowse link 15 3,644,296 3,650,765 RGD:11554173
G Pld1 phospholipase D1 JBrowse link 2 113,651,967 113,849,403 RGD:11554173
G Prkcg protein kinase C, gamma JBrowse link 1 64,407,098 64,433,698 RGD:1358416
G Proc protein C, inactivator of coagulation factors Va and VIIIa JBrowse link 18 24,918,402 24,928,822 RGD:11100027
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 JBrowse link 4 49,941,046 50,140,764 RGD:9590118
G Reln reelin JBrowse link 4 9,347,533 9,774,257 RGD:13207538
G Rgma repulsive guidance molecule BMP co-receptor a JBrowse link 1 134,699,053 134,742,512 RGD:9850121
RGD:9850122
G Rpl28 ribosomal protein L28 JBrowse link 1 72,619,282 72,621,941 RGD:6480229
G Runx1 RUNX family transcription factor 1 JBrowse link 11 32,765,147 33,003,061 RGD:11251714
G S100a5 S100 calcium binding protein A5 JBrowse link 2 189,999,669 190,005,877 RGD:11554173
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:1580876
G Serpinf1 serpin family F member 1 JBrowse link 10 62,241,750 62,254,145 RGD:8655545
G Serpinh1 serpin family H member 1 JBrowse link 1 164,301,010 164,308,306 RGD:11554173
G Shh sonic hedgehog signaling molecule JBrowse link 4 718,538 727,691 RGD:12879461
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:9585664
G Slc12a2 solute carrier family 12 member 2 JBrowse link 18 52,917,124 52,985,281 RGD:1580583
RGD:14398833
G Slc2a1 solute carrier family 2 member 1 JBrowse link 5 138,154,677 138,182,897 RGD:12879855
G Slpi secretory leukocyte peptidase inhibitor JBrowse link 3 160,799,979 160,802,228 RGD:9999390
G Smo smoothened, frizzled class receptor JBrowse link 4 57,019,941 57,041,779 RGD:12832759
RGD:12879404
G Smox spermine oxidase JBrowse link 3 124,068,796 124,103,726 RGD:11554173
G Snap91 synaptosome associated protein 91 JBrowse link 8 94,447,558 94,564,772 RGD:13461853
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:8657021
RGD:8657023
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:11554173
G Sphk2 sphingosine kinase 2 JBrowse link 1 101,692,972 101,700,604 RGD:11554173
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:11554173
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:5128609
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:10450594
RGD:13825261
RGD:13792833
G Tnfaip6 TNF alpha induced protein 6 JBrowse link 3 37,545,238 37,564,704 RGD:11554173
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:13825261
G Upp1 uridine phosphorylase 1 JBrowse link 14 89,314,234 89,334,060 RGD:2317094
G Xdh xanthine dehydrogenase JBrowse link 6 25,149,570 25,211,273 RGD:11554173
Multi-Infarct Dementia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G App amyloid beta precursor protein JBrowse link 11 24,425,013 24,641,872 RGD:10054257
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:10054050
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:10054050
G G6pd glucose-6-phosphate dehydrogenase JBrowse link X 156,274,800 156,293,935 RGD:10449132
G Il2 interleukin 2 JBrowse link 2 123,847,150 123,851,854 RGD:10047081
pyridoxamine 5'-phosphate oxidase deficiency term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pnpo pyridoxamine 5'-phosphate oxidase JBrowse link 10 84,874,926 84,881,190 RGD:7240710
RGD:8554872
transient cerebral ischemia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acvrl1 activin A receptor like type 1 JBrowse link 7 142,769,942 142,787,336 RGD:1579751
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 JBrowse link 11 25,342,119 25,350,938 RGD:9681747
G Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif, 4 JBrowse link 13 89,622,996 89,632,485 RGD:9681747
G Adarb1 adenosine deaminase, RNA-specific, B1 JBrowse link 20 11,972,352 12,101,022 RGD:10755337
G Adora1 adenosine A1 receptor JBrowse link 13 51,042,111 51,076,913 RGD:11554173
G Ager advanced glycosylation end product-specific receptor JBrowse link 20 4,363,152 4,366,079 RGD:7245542
RGD:8696004
G Agt angiotensinogen JBrowse link 19 57,321,594 57,333,460 RGD:8549480
G Aifm1 apoptosis inducing factor, mitochondria associated 1 JBrowse link X 135,304,063 135,343,062 RGD:10047409
RGD:10053562
G Ank1 ankyrin 1 JBrowse link 16 73,681,422 73,912,605 RGD:1599109
G Ank2 ankyrin 2 JBrowse link 2 231,224,643 231,522,655 RGD:1599109
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:6903926
G Aqp4 aquaporin 4 JBrowse link 18 6,766,009 6,782,757 RGD:13207320
G Atf2 activating transcription factor 2 JBrowse link 3 60,721,137 60,795,951 RGD:10047405
RGD:10047413
G Atp5f1b ATP synthase F1 subunit beta JBrowse link 7 2,504,708 2,511,748 RGD:13792582
G Bace1 beta-secretase 1 JBrowse link 8 50,140,092 50,162,388 RGD:13782170
G Bad BCL2-associated agonist of cell death JBrowse link 1 222,198,516 222,207,459 RGD:11554173
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:10054102
G Bbc3 Bcl-2 binding component 3 JBrowse link 1 78,261,491 78,267,802 RGD:634629
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:2290557
RGD:11561910
RGD:11522725
G Bcl2l2 Bcl2-like 2 JBrowse link 15 33,543,774 33,549,165 RGD:14394498
RGD:14394500
G Becn1 beclin 1 JBrowse link 10 89,209,944 89,225,297 RGD:11561910
G Bex3 brain expressed X-linked 3 JBrowse link X 106,823,442 106,825,016 RGD:9743974
G Bnip3 BCL2 interacting protein 3 JBrowse link 1 211,248,098 211,265,282 RGD:2314028
G C3 complement C3 JBrowse link 9 9,721,137 9,747,084 RGD:7411628
RGD:11554173
G Cab39 calcium binding protein 39 JBrowse link 9 92,834,327 92,895,778 RGD:14398833
G Camk2a calcium/calmodulin-dependent protein kinase II alpha JBrowse link 18 56,193,978 56,295,869 RGD:7241547
RGD:13681927
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:10053706
G Casp7 caspase 7 JBrowse link 1 277,190,557 277,242,779 RGD:13782285
G Casp8 caspase 8 JBrowse link 9 65,614,142 65,662,624 RGD:13782286
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:2311321
RGD:11554173
RGD:10053706
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:8661794
G Cbl Cbl proto-oncogene JBrowse link 8 48,481,256 48,564,775 RGD:4108486
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:8549519
RGD:8549729
G Ccl20 C-C motif chemokine ligand 20 JBrowse link 9 88,918,359 88,921,017 RGD:7488896
G Ccnh cyclin H JBrowse link 2 13,593,100 13,613,910 RGD:69371
G Ccr6 C-C motif chemokine receptor 6 JBrowse link 1 53,063,380 53,087,519 RGD:7488896
G Cd40 CD40 molecule JBrowse link 3 161,519,789 161,534,943 RGD:11352234
G Cd40lg CD40 ligand JBrowse link X 159,703,703 159,714,886 RGD:11352234
G Cdk5 cyclin-dependent kinase 5 JBrowse link 4 7,282,945 7,287,427 RGD:13506925
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:8552691
G Cebpa CCAAT/enhancer binding protein alpha JBrowse link 1 91,363,492 91,366,164 RGD:10401192
G Chka choline kinase alpha JBrowse link 1 219,076,618 219,126,221 RGD:10401831
G Coq7 coenzyme Q7, hydroxylase JBrowse link 1 188,176,060 188,190,874 RGD:10402096
G Creb1 cAMP responsive element binding protein 1 JBrowse link 9 71,229,753 71,298,994 RGD:10047405
G Crem cAMP responsive element modulator JBrowse link 17 57,021,704 57,090,888 RGD:632385
G Csf3 colony stimulating factor 3 JBrowse link 10 86,616,785 86,619,160 RGD:10450512
G Cx3cl1 C-X3-C motif chemokine ligand 1 JBrowse link 19 10,644,267 10,654,861 RGD:9491776
G Cx3cr1 C-X3-C motif chemokine receptor 1 JBrowse link 8 128,740,756 128,754,514 RGD:9491776
G Cxcl12 C-X-C motif chemokine ligand 12 JBrowse link 4 149,261,044 149,273,891 RGD:11352662
G Cycs cytochrome c, somatic JBrowse link 4 80,331,226 80,333,326 RGD:11554173
G Daxx death-domain associated protein JBrowse link 20 5,480,103 5,485,962 RGD:9587802
G Dbn1 drebrin 1 JBrowse link 17 9,679,511 9,693,878 RGD:10398814
G Dffb DNA fragmentation factor subunit beta JBrowse link 5 171,250,559 171,261,875 RGD:628524
G Dusp1 dual specificity phosphatase 1 JBrowse link 10 16,970,642 16,973,425 RGD:7771582
G Dusp16 dual specificity phosphatase 16 JBrowse link 4 168,470,141 168,551,346 RGD:7775014
G Eed embryonic ectoderm development JBrowse link 1 154,189,252 154,216,340 RGD:9588303
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha JBrowse link 6 102,048,372 102,073,041 RGD:10395353
RGD:11041881
G Elane elastase, neutrophil expressed JBrowse link 7 12,638,320 12,640,168 RGD:10450558
G Elk1 ETS transcription factor ELK1 JBrowse link X 1,287,875 1,304,822 RGD:7488902
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 JBrowse link 1 259,692,020 259,818,922 RGD:9685492
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:7349341
G Epo erythropoietin JBrowse link 12 22,274,828 22,278,268 RGD:10401060
RGD:11041699
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit JBrowse link 1 80,256,973 80,268,198 RGD:2313668
G Ercc6 ERCC excision repair 6, chromatin remodeling factor JBrowse link 16 8,734,028 8,804,610 RGD:10401104
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:10045843
RGD:10045845
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:7364962
G F11r F11 receptor JBrowse link 13 89,826,272 89,850,151 RGD:7488943
G F12 coagulation factor XII JBrowse link 17 9,736,577 9,744,420 RGD:11041786
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:2311437
RGD:8686422
RGD:8662928
G Fgfr1 Fibroblast growth factor receptor 1 JBrowse link 16 71,265,390 71,319,046 RGD:10402044
G Flt1 FMS-related tyrosine kinase 1 JBrowse link 12 9,033,993 9,205,886 RGD:10402150
G Fmr1 FMRP translational regulator 1 JBrowse link X 154,684,924 154,722,369 RGD:11566024
G G6pd glucose-6-phosphate dehydrogenase JBrowse link X 156,274,800 156,293,935 RGD:10449127
G Ghsr growth hormone secretagogue receptor JBrowse link 2 113,065,953 113,071,265 RGD:12907500
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:7207263
RGD:8662426
G Gjb6 gap junction protein, beta 6 JBrowse link 15 37,400,888 37,411,656 RGD:6480433
G Glrx glutaredoxin JBrowse link 2 2,606,032 2,615,944 RGD:9686043
G Got1 glutamic-oxaloacetic transaminase 1 JBrowse link 1 263,246,248 263,269,762 RGD:13504852
RGD:13504855
RGD:13504854
G Gsr glutathione-disulfide reductase JBrowse link 16 62,197,617 62,239,987 RGD:10401855
G H2ax H2A.X variant histone JBrowse link 8 48,665,652 48,666,981 RGD:8693742
G Havcr2 hepatitis A virus cellular receptor 2 JBrowse link 10 31,561,838 31,590,624 RGD:9686115
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:9068877
G Hmgb1 high mobility group box 1 JBrowse link 12 7,082,529 7,090,246 RGD:8696004
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 4 81,237,496 81,241,281 RGD:10041006
G Hnrnpab heterogeneous nuclear ribonucleoprotein A/B JBrowse link 10 34,955,713 34,961,662 RGD:9999181
G Hrh2 histamine receptor H 2 JBrowse link 17 10,912,959 10,931,389 RGD:9685533
G Hsf1 heat shock transcription factor 1 JBrowse link 7 117,538,523 117,565,478 RGD:10402389
RGD:10402772
G Hspa5 heat shock protein family A (Hsp70) member 5 JBrowse link 3 13,838,304 13,842,763 RGD:11354959
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:10059344
G Hspb1 heat shock protein family B (small) member 1 JBrowse link 12 23,839,390 23,841,051 RGD:10402577
G Htra2 HtrA serine peptidase 2 JBrowse link 4 113,883,671 113,886,833 RGD:10402932
RGD:11554173
G Htt huntingtin JBrowse link 14 81,105,139 81,254,637 RGD:1304431
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:8547729
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:12904924
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta JBrowse link 16 74,177,233 74,230,809 RGD:7495766
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:7364868
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:7175551
RGD:7175554
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:1626674
RGD:8551852
G Ilk integrin-linked kinase JBrowse link 1 170,578,941 170,585,192 RGD:11554173
G Itgb3 integrin subunit beta 3 JBrowse link 10 92,667,869 92,783,413 RGD:6907424
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 JBrowse link 4 140,247,297 140,580,749 RGD:6482813
G Jak2 Janus kinase 2 JBrowse link 1 247,398,667 247,457,521 RGD:8694326
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 JBrowse link 13 90,722,945 90,753,338 RGD:8662899
G Kcnk2 potassium two pore domain channel subfamily K member 2 JBrowse link 13 107,690,111 107,886,476 RGD:9831121
RGD:9831178
RGD:9831122
G Kdm1a lysine demethylase 1A JBrowse link 5 154,909,003 154,965,171 RGD:9588301
G Keap1 Kelch-like ECH-associated protein 1 JBrowse link 8 22,250,518 22,259,868 RGD:6893270
G Lmna lamin A/C JBrowse link 2 187,842,884 187,863,552 RGD:2293745
G Lpar1 lysophosphatidic acid receptor 1 JBrowse link 5 75,557,038 75,678,067 RGD:9850154
G Ltbp1 latent transforming growth factor beta binding protein 1 JBrowse link 6 21,203,502 21,600,441 RGD:10412057
G Madd MAP-kinase activating death domain JBrowse link 3 79,960,301 80,003,023 RGD:9588641
G Map1lc3a microtubule-associated protein 1 light chain 3 alpha JBrowse link 3 150,801,289 150,802,935 RGD:11561910
G Map2k4 mitogen activated protein kinase kinase 4 JBrowse link 10 52,196,121 52,301,887 RGD:7495830
G Map3k5 mitogen-activated protein kinase kinase kinase 5 JBrowse link 1 15,412,603 15,613,752 RGD:10412334
G Map4k1 mitogen activated protein kinase kinase kinase kinase 1 JBrowse link 1 87,937,126 87,959,514 RGD:7495845
RGD:7495847
G Mbd1 methyl-CpG binding domain protein 1 JBrowse link 18 70,248,568 70,263,190 RGD:9587846
G Mbd2 methyl-CpG binding domain protein 2 JBrowse link 18 65,814,026 65,885,115 RGD:9587846
G Mbd3 methyl-CpG binding domain protein 3 JBrowse link 7 12,179,046 12,186,251 RGD:9587846
G Mbp myelin basic protein JBrowse link 18 79,326,738 79,437,310 RGD:7349336
G Mcfd2 multiple coagulation factor deficiency 2 JBrowse link 6 10,887,303 10,899,221 RGD:11062141
G Mdm2 MDM2 proto-oncogene JBrowse link 7 60,719,060 60,743,618 RGD:10412310
G Mecp2 methyl CpG binding protein 2 JBrowse link X 156,650,389 156,713,813 RGD:9587846
G Mff mitochondrial fission factor JBrowse link 9 88,490,280 88,518,517 RGD:12879457
G Mfn2 mitofusin 2 JBrowse link 5 164,684,244 164,715,414 RGD:13204807
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:8547930
RGD:8657086
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:8547921
RGD:13207320
RGD:13207323
RGD:8547930
G Mt1 metallothionein 1 JBrowse link 19 11,301,991 11,303,007 RGD:10412650
G Mt2A metallothionein 2A JBrowse link 19 11,307,966 11,308,740 RGD:10412650
G Mt3 metallothionein 3 JBrowse link 19 11,324,708 11,326,112 RGD:9685804
G Myb MYB proto-oncogene, transcription factor JBrowse link 1 16,658,178 16,690,135 RGD:11532683
G Nampt nicotinamide phosphoribosyltransferase JBrowse link 6 52,122,085 52,156,473 RGD:13781879
RGD:13781895
G Ndrg2 NDRG family member 2 JBrowse link 15 28,305,820 28,314,459 RGD:11554173
G Ndrg4 NDRG family member 4 JBrowse link 19 9,766,439 9,802,396 RGD:7247728
G Nefh neurofilament heavy JBrowse link 14 85,181,572 85,191,557 RGD:9743938
G Nefl neurofilament light JBrowse link 15 44,799,378 44,803,251 RGD:9743938
G Nefm neurofilament medium JBrowse link 15 44,855,307 44,860,604 RGD:9743938
G Nf1 neurofibromin 1 JBrowse link 10 66,732,460 66,928,706 RGD:12789703
G Nfkb1 nuclear factor kappa B subunit 1 JBrowse link 2 240,773,520 240,890,053 RGD:10045943
G Ngb neuroglobin JBrowse link 6 111,126,259 111,131,699 RGD:9743952
RGD:9743965
RGD:9743964
G Ngfr nerve growth factor receptor JBrowse link 10 83,389,828 83,408,061 RGD:9743974
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:5508733
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:7257600
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:13450951
RGD:13503353
RGD:13503330
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link 19 38,422,210 38,437,103 RGD:13439718
RGD:13442499
RGD:13439727
G Nrxn1 neurexin 1 JBrowse link 6 13,886,757 15,191,660 RGD:632385
G Ogg1 8-oxoguanine DNA glycosylase JBrowse link 4 145,282,828 145,289,367 RGD:8657406
G Opa1 OPA1, mitochondrial dynamin like GTPase JBrowse link 11 74,717,600 74,793,902 RGD:7800722
RGD:13208946
G Optn optineurin JBrowse link 17 77,167,700 77,218,374 RGD:13434905
G Parl presenilin associated, rhomboid-like JBrowse link 11 84,517,368 84,544,463 RGD:12902620
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:2325713
G Pawr pro-apoptotic WT1 regulator JBrowse link 7 51,273,764 51,353,700 RGD:1302269
RGD:9835381
G Pax6 paired box 6 JBrowse link 3 95,700,241 95,728,682 RGD:8552354
G Pcna proliferating cell nuclear antigen JBrowse link 3 124,880,698 124,884,570 RGD:10448974
G Pde4d phosphodiesterase 4D JBrowse link 2 40,219,999 41,468,551 RGD:7327148
G Pecam1 platelet and endothelial cell adhesion molecule 1 JBrowse link 10 94,850,971 94,913,202 RGD:6766379
G Plat plasminogen activator, tissue type JBrowse link 16 74,098,263 74,122,897 RGD:1580875
G Plau plasminogen activator, urokinase JBrowse link 15 3,644,296 3,650,765 RGD:7241584
RGD:7241795
G Pparg peroxisome proliferator-activated receptor gamma JBrowse link 4 147,274,055 147,399,383 RGD:2301892
RGD:8553032
RGD:2301866
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A JBrowse link 1 101,511,899 101,515,043 RGD:9999154
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A JBrowse link 4 29,976,485 30,247,371 RGD:10043805
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:10413862
G Ptafr platelet-activating factor receptor JBrowse link 5 150,746,284 150,775,675 RGD:9999221
RGD:10043297
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:1358425
G Ptger4 prostaglandin E receptor 4 JBrowse link 2 54,951,625 54,966,470 RGD:10043375
G Ptn pleiotrophin JBrowse link 4 64,239,156 64,330,996 RGD:9831440
G Ptpn5 protein tyrosine phosphatase, non-receptor type 5 JBrowse link 1 103,197,918 103,258,309 RGD:9835010
G Rack1 receptor for activated C kinase 1 JBrowse link 10 34,149,717 34,155,198 RGD:9588303
G Rps6 ribosomal protein S6 JBrowse link 5 105,197,821 105,200,681 RGD:11041643
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:11073692
G Serpinf1 serpin family F member 1 JBrowse link 10 62,241,750 62,254,145 RGD:8613878
G Sgk1 serum/glucocorticoid regulated kinase 1 JBrowse link 1 24,185,451 24,302,309 RGD:1580967
G Sin3a SIN3 transcription regulator family member A JBrowse link 8 61,748,590 61,803,314 RGD:9495912
G Sirt6 sirtuin 6 JBrowse link 7 10,937,622 10,943,048 RGD:9586062
G Slc12a2 solute carrier family 12 member 2 JBrowse link 18 52,917,124 52,985,281 RGD:14398833
G Slc17a6 solute carrier family 17 member 6 JBrowse link 1 106,980,463 107,038,717 RGD:9999193
G Slc17a7 solute carrier family 17 member 7 JBrowse link 1 101,161,265 101,172,292 RGD:9999193
G Slc17a8 solute carrier family 17 member 8 JBrowse link 7 30,215,231 30,274,993 RGD:9999193
G Smpd3 sphingomyelin phosphodiesterase 3 JBrowse link 19 38,237,963 38,321,572 RGD:9588303
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:8655885
RGD:11554173
RGD:8655986
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:11554173
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:8694326
RGD:8694331
G Tert telomerase reverse transcriptase JBrowse link 1 32,250,876 32,275,330 RGD:11038669
G Tfpi tissue factor pathway inhibitor JBrowse link 3 71,852,738 71,902,127 RGD:11062087
G Tia1 TIA1 cytotoxic granule-associated RNA binding protein JBrowse link 4 118,207,845 118,238,246 RGD:10059581
G Tial1 Tia1 cytotoxic granule-associated RNA binding protein-like 1 JBrowse link 1 199,844,854 199,865,843 RGD:1357161
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:7364868
RGD:13825263
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:8661762
RGD:13825263
G Trpc6 transient receptor potential cation channel, subfamily C, member 6 JBrowse link 8 6,811,543 6,917,534 RGD:7247582
RGD:7247585
RGD:7247583
G Trpm2 transient receptor potential cation channel, subfamily M, member 2 JBrowse link 20 11,434,062 11,482,880 RGD:10003026
G Trpv3 transient receptor potential cation channel, subfamily V, member 3 JBrowse link 10 59,829,755 59,863,780 RGD:7175554
G Ucp2 uncoupling protein 2 JBrowse link 1 165,506,375 165,512,744 RGD:7204428
G Vwf von Willebrand factor JBrowse link 4 158,085,059 158,219,525 RGD:7207039
G Wnk1 WNK lysine deficient protein kinase 1 JBrowse link 4 152,452,211 152,578,469 RGD:14398833
G Wnk2 WNK lysine deficient protein kinase 2 JBrowse link 17 15,923,508 16,032,271 RGD:14398833
G Wnk4 WNK lysine deficient protein kinase 4 JBrowse link 10 89,181,139 89,198,213 RGD:14398833
G Xrcc1 X-ray repair cross complementing 1 JBrowse link 1 81,412,635 81,441,680 RGD:2325713

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15590
    Pathological Conditions, Signs and Symptoms 8013
      Pathologic Processes 5074
        ischemia 1265
          brain ischemia 514
            Chronic Cerebral Hypoperfusion 16
            Hypoxia-Ischemia, Brain + 79
            brain infarction + 221
            transient cerebral ischemia + 195
Path 2
Term Annotations click to browse term
  disease 15590
    disease of anatomical entity 14919
      nervous system disease 10196
        central nervous system disease 8075
          brain disease 7543
            cerebrovascular disease 800
              brain ischemia 514
                Chronic Cerebral Hypoperfusion 16
                Hypoxia-Ischemia, Brain + 79
                brain infarction + 221
                transient cerebral ischemia + 195
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.