ONTOLOGY REPORT - ANNOTATIONS


Term:basal cell carcinoma
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Accession:DOID:2513 term browser browse the term
Definition:A malignant skin neoplasm that seldom metastasizes but has potentialities for local invasion and destruction. Clinically it is divided into types: nodular, cicatricial, morphaic, and erythematoid (pagetoid). They develop on hair-bearing skin, most commonly on sun-exposed areas. Approximately 85% are found on the head and neck area and the remaining 15% on the trunk and limbs. (From DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, p1471)
Synonyms:exact_synonym: BASAL CELL CARCINOMA, SUSCEPTIBILITY TO, 1;   BASAL CELL CARCINOMA, SUSCEPTIBILITY TO, 2;   BASAL CELL CARCINOMA, SUSCEPTIBILITY TO, 3;   BASAL CELL CARCINOMA, SUSCEPTIBILITY TO, 4;   BASAL CELL CARCINOMA, SUSCEPTIBILITY TO, 5;   BASAL CELL CARCINOMA, SUSCEPTIBILITY TO, 6;   BASAL CELL CARCINOMA, SUSCEPTIBILITY TO, 7;   BCC1;   BCC2;   BCC3;   BCC4;   BCC5;   BCC6;   BCC7;   Basal Cell Cancer;   Basal Cell Epitheliomas;   Basal cell carcinoma of skin;   Basal cell tumor;   basal cell cancers;   basal cell carcinomas;   basal cell epithelioma;   malignant basal cell neoplasm;   malignant basal cell tumor;   rodent ulcer;   rodent ulcers
 narrow_synonym: BASAL CELL CARCINOMA, SOMATIC;   BASAL CELL CARCINOMA, SPORADIC
 primary_id: MESH:D002280
 alt_id: OMIM:605462;   OMIM:613058;   OMIM:613059;   OMIM:613061;   OMIM:613062;   OMIM:613063;   OMIM:614740;   RDO:0001219
For additional species annotation, visit the Alliance of Genome Resources.


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basal cell carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asip agouti signaling protein JBrowse link 3 150,492,010 150,579,870 RGD:11554173
G Bap1 Brca1 associated protein 1 JBrowse link 16 7,336,685 7,345,511 RGD:9586038
RGD:11554173
G Ccnh cyclin H JBrowse link 2 13,593,100 13,613,910 RGD:8554872
G Clptm1l CLPTM1-like JBrowse link 1 32,281,207 32,297,196 RGD:11554173
G Crnkl1 crooked neck pre-mRNA splicing factor 1 JBrowse link 6 18,349,226 18,351,540 RGD:9850250
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 JBrowse link 9 67,699,397 67,706,068 RGD:7411686
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link 10 86,367,596 86,391,728 RGD:11554173
G Fbxw7 F-box and WD repeat domain containing 7 JBrowse link 2 184,230,191 184,309,805 RGD:11554173
G Gli2 GLI family zinc finger 2 JBrowse link 13 34,829,021 35,049,172 RGD:11554173
G Hhip Hedgehog-interacting protein JBrowse link 19 31,525,134 31,614,487 RGD:11552592
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:11554173
G Krt17 keratin 17 JBrowse link 10 88,158,993 88,163,712 RGD:11554173
G Krt5 keratin 5 JBrowse link 7 143,320,142 143,324,536 RGD:11554173
G Lats1 large tumor suppressor kinase 1 JBrowse link 1 1,784,078 1,817,310 RGD:11554173
G Mc1r melanocortin 1 receptor JBrowse link 19 56,215,420 56,219,987 RGD:11554173
G Mycn MYCN proto-oncogene, bHLH transcription factor JBrowse link 6 38,222,554 38,228,419 RGD:11554173
G Oca2 OCA2 melanosomal transmembrane protein JBrowse link 1 114,661,970 114,987,433 RGD:9491840
RGD:9491841
G Ogg1 8-oxoguanine DNA glycosylase JBrowse link 4 145,282,828 145,289,367 RGD:8657137
RGD:8657158
G Palb2 partner and localizer of BRCA2 JBrowse link 1 192,064,586 192,088,547 RGD:8554872
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:11554173
G Ppp6c protein phosphatase 6, catalytic subunit JBrowse link 3 23,478,123 23,510,959 RGD:11554173
G Ptch1 patched 1 JBrowse link 17 1,032,242 1,085,885 RGD:704355
RGD:8554872
RGD:7240710
RGD:12801453
RGD:11554173
G Ptch2 patched 2 JBrowse link 5 135,962,252 135,983,816 RGD:8554872
RGD:11554173
RGD:7240710
G Ptpn14 protein tyrosine phosphatase, non-receptor type 14 JBrowse link 13 108,689,916 108,841,593 RGD:11554173
G Rasa1 RAS p21 protein activator 1 JBrowse link 2 13,617,021 13,696,531 RGD:737716
RGD:11554173
RGD:7240710
RGD:8554872
G Rb1 RB transcriptional corepressor 1 JBrowse link 15 55,081,582 55,209,060 RGD:11554173
G Rpe65 retinoid isomerohydrolase RPE65 JBrowse link 2 266,141,581 266,169,197 RGD:9495923
G Shh sonic hedgehog signaling molecule JBrowse link 4 718,538 727,691 RGD:12801452
G Slc45a2 solute carrier family 45, member 2 JBrowse link 2 60,966,671 60,999,398 RGD:11554173
G Smo smoothened, frizzled class receptor JBrowse link 4 57,019,941 57,041,779 RGD:704355
RGD:7240710
RGD:8554872
RGD:12801453
RGD:11554173
G Stk19 serine/threonine kinase 19 JBrowse link 20 4,317,440 4,517,128 RGD:11554173
G Sufu SUFU negative regulator of hedgehog signaling JBrowse link 1 266,143,766 266,241,742 RGD:11554173
G Tert telomerase reverse transcriptase JBrowse link 1 32,250,876 32,275,330 RGD:11554173
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:8547844
RGD:8554872
RGD:11554173
RGD:7240710
RGD:8547848
G Tyr tyrosinase JBrowse link 1 151,012,598 151,106,802 RGD:11554173
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:8158063
RGD:8158076
G Xpa XPA, DNA damage recognition and repair factor JBrowse link 5 61,749,767 61,793,641 RGD:11554173
G Xrcc3 X-ray repair cross complementing 3 JBrowse link 6 136,366,917 136,380,751 RGD:11554173
G Xrcc5 X-ray repair cross complementing 5 JBrowse link 9 79,659,275 79,748,050 RGD:8698657
G Xrcc6 X-ray repair cross complementing 6 JBrowse link 7 123,259,881 123,280,613 RGD:8698657
Multiple Basal Cell Carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccnh cyclin H JBrowse link 2 13,593,100 13,613,910 RGD:8554872
G Ptch1 patched 1 JBrowse link 17 1,032,242 1,085,885 RGD:8554872
G Ptch2 patched 2 JBrowse link 5 135,962,252 135,983,816 RGD:8554872
G Rasa1 RAS p21 protein activator 1 JBrowse link 2 13,617,021 13,696,531 RGD:8554872
nevoid basal cell carcinoma syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gli1 GLI family zinc finger 1 JBrowse link 7 70,620,794 70,633,171 RGD:12801443
G Gli2 GLI family zinc finger 2 JBrowse link 13 34,829,021 35,049,172 RGD:11554173
G Ptch1 patched 1 JBrowse link 17 1,032,242 1,085,885 RGD:7240710
RGD:8554872
RGD:13207424
RGD:13207421
RGD:12801443
RGD:12801422
RGD:12798568
RGD:11554173
G Ptch2 patched 2 JBrowse link 5 135,962,252 135,983,816 RGD:8554872
RGD:7240710
G Pth parathyroid hormone JBrowse link 1 178,215,829 178,218,761 RGD:11554173
G Shh sonic hedgehog signaling molecule JBrowse link 4 718,538 727,691 RGD:12802345
G Smo smoothened, frizzled class receptor JBrowse link 4 57,019,941 57,041,779 RGD:12801443
G Sufu SUFU negative regulator of hedgehog signaling JBrowse link 1 266,143,766 266,241,742 RGD:7240710
RGD:8554872

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14919
    disease of cellular proliferation 5587
      Neoplasms by Histologic Type 3445
        Glandular and Epithelial Neoplasms 2690
          Basal Cell Neoplasms 46
            basal cell carcinoma 42
              Basal Cell Carcinoma, Nonsyndromic 0
              Bazex-Dupre-Christol Syndrome 0
              Multiple Basal Cell Carcinoma 4
              Rombo syndrome 0
              adamantinoid basal cell epithelioma 0
              adenoid basal cell carcinoma 0
              anal margin basal cell carcinoma 0
              basosquamous carcinoma 0
              clear cell basal cell carcinoma 0
              cystic basal cell carcinoma 0
              external ear basal cell carcinoma 0
              fibroepithelial basal cell carcinoma 0
              follicular basal cell carcinoma 0
              infiltrative basal cell carcinoma 0
              infundibulocystic basal cell carcinoma 0
              metatypical basal cell carcinoma 0
              micronodular basal cell carcinoma 0
              morpheaform basal cell carcinoma 0
              nevoid basal cell carcinoma syndrome + 8
              nodular basal cell carcinoma + 0
              penis basal cell carcinoma 0
              pigmented basal cell carcinoma 0
              sarcomatoid basal cell carcinoma 0
              scrotum basal cell carcinoma 0
              sebaceous basal cell carcinoma 0
              signet ring basal cell carcinoma 0
              superficial basal cell carcinoma 0
              vulva basal cell carcinoma 0
Path 2
Term Annotations click to browse term
  disease 14919
    disease of anatomical entity 14083
      nervous system disease 9147
        sensory system disease 4264
          skin disease 2267
            Skin Neoplasms 193
              skin cancer 95
                skin carcinoma 48
                  basal cell carcinoma 42
                    Basal Cell Carcinoma, Nonsyndromic 0
                    Bazex-Dupre-Christol Syndrome 0
                    Multiple Basal Cell Carcinoma 4
                    Rombo syndrome 0
                    adamantinoid basal cell epithelioma 0
                    adenoid basal cell carcinoma 0
                    anal margin basal cell carcinoma 0
                    basosquamous carcinoma 0
                    clear cell basal cell carcinoma 0
                    cystic basal cell carcinoma 0
                    external ear basal cell carcinoma 0
                    fibroepithelial basal cell carcinoma 0
                    follicular basal cell carcinoma 0
                    infiltrative basal cell carcinoma 0
                    infundibulocystic basal cell carcinoma 0
                    metatypical basal cell carcinoma 0
                    micronodular basal cell carcinoma 0
                    morpheaform basal cell carcinoma 0
                    nevoid basal cell carcinoma syndrome + 8
                    nodular basal cell carcinoma + 0
                    penis basal cell carcinoma 0
                    pigmented basal cell carcinoma 0
                    sarcomatoid basal cell carcinoma 0
                    scrotum basal cell carcinoma 0
                    sebaceous basal cell carcinoma 0
                    signet ring basal cell carcinoma 0
                    superficial basal cell carcinoma 0
                    vulva basal cell carcinoma 0
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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.