ONTOLOGY REPORT - ANNOTATIONS


Term:pulmonary tuberculosis
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Accession:DOID:2957 term browser browse the term
Definition:MYCOBACTERIUM infections of the lung.
Synonyms:exact_synonym: Pulmonary Consumption;   Pulmonary Consumptions;   Pulmonary Phthises;   Pulmonary Phthisis;   Pulmonary Tuberculoses
 primary_id: MESH:D014397;   RDO:0006578
For additional species annotation, visit the Alliance of Genome Resources.


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pulmonary tuberculosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ada adenosine deaminase JBrowse link 3 160,115,840 160,139,947 RGD:5128854
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link 11 81,330,845 81,344,488 RGD:5686405
G Alox5 arachidonate 5-lipoxygenase JBrowse link 4 148,398,004 148,446,308 RGD:4890411
G Asap1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 JBrowse link 7 104,670,076 104,951,090 RGD:11554173
G C3 complement C3 JBrowse link 9 9,721,137 9,747,084 RGD:5129500
G Ccl1 C-C motif chemokine ligand 1 JBrowse link 10 69,534,976 69,537,836 RGD:4891409
RGD:4891408
G Ccl19 C-C motif chemokine ligand 19 JBrowse link 5 58,181,025 58,182,969 RGD:5130906
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:4891439
RGD:11554173
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:4891879
RGD:4892112
G Ccr2 C-C motif chemokine receptor 2 RGD:734715
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:4892094
G Cd14 CD14 molecule JBrowse link 18 29,560,341 29,562,290 RGD:4144205
G Cd209 CD209 molecule JBrowse link 12 2,406,879 2,413,324 RGD:11554173
G Cd86 CD86 molecule JBrowse link 11 67,060,305 67,117,990 RGD:4892339
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:5131284
RGD:5131287
G Cxcl2 C-X-C motif chemokine ligand 2 JBrowse link 14 18,731,346 18,733,391 RGD:5135037
G Cxcl6 C-X-C motif chemokine ligand 6 JBrowse link 14 18,860,201 18,920,839 RGD:5135246
G Cyba cytochrome b-245 alpha chain JBrowse link 19 55,249,634 55,257,824 RGD:4780358
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:4140932
G Gstt1 glutathione S-transferase theta 1 JBrowse link 20 13,799,102 13,816,527 RGD:4140932
G Havcr2 hepatitis A virus cellular receptor 2 JBrowse link 10 31,561,838 31,590,624 RGD:5135524
G Il13 interleukin 13 JBrowse link 10 38,982,909 38,985,466 RGD:4145649
G Il15 interleukin 15 JBrowse link 19 23,542,606 23,624,366 RGD:4990461
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:4889836
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:4142835
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:4143180
RGD:5147843
RGD:4143179
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:4143180
RGD:4143174
RGD:4143179
G Il27ra interleukin 27 receptor subunit alpha JBrowse link 19 25,151,835 25,163,995 RGD:5128486
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:5128550
G Il4r interleukin 4 receptor JBrowse link 1 196,942,343 196,967,221 RGD:5128510
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:4143257
G Il6r interleukin 6 receptor JBrowse link 2 189,196,180 189,255,987 RGD:5128632
G Irf1 interferon regulatory factor 1 JBrowse link 10 39,109,530 39,116,532 RGD:5128719
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:4889999
G Lta lymphotoxin alpha JBrowse link 20 4,851,889 4,854,677 RGD:4143234
G Mbl2 mannose binding lectin 2 JBrowse link 1 248,435,069 248,442,669 RGD:4889452
G Mif macrophage migration inhibitory factor JBrowse link 20 13,715,219 13,732,980 RGD:4891004
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:5130746
G Nat2 N-acetyltransferase 2 JBrowse link 16 23,960,709 23,991,570 RGD:4140932
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:5131510
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:4144122
G Plaur plasminogen activator, urokinase receptor JBrowse link 1 81,328,171 81,344,954 RGD:6483832
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 JBrowse link 2 206,342,066 206,390,348 RGD:6484723
G RT1-Bb RT1 class II, locus Bb JBrowse link 20 4,043,726 4,049,367 RGD:5147614
G Sftpa1 surfactant protein A1 JBrowse link 16 18,716,019 18,719,404 RGD:4144874
RGD:4144875
G Slc11a1 solute carrier family 11 member 1 JBrowse link 9 81,655,590 81,666,697 RGD:5684974
G Tap1 transporter 1, ATP binding cassette subfamily B member JBrowse link 20 3,979,302 3,989,669 RGD:6482248
G Tap2 transporter 2, ATP binding cassette subfamily B member JBrowse link 20 3,995,544 4,009,587 RGD:5147851
G Tlr1 toll-like receptor 1 JBrowse link 14 45,062,662 45,065,014 RGD:4889525
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:4145304
RGD:4145355
RGD:4145323
RGD:4145320
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:4144106
RGD:4144122
RGD:4144205
G Tlr9 toll-like receptor 9 JBrowse link 8 114,916,122 114,920,171 RGD:5130704
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:4143388
RGD:4142835
RGD:4143395
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:4889849
RGD:4889853
RGD:4889845
RGD:4889842
RGD:4889830

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14823
    disease of anatomical entity 13997
      respiratory system disease 2375
        lung disease 1370
          pulmonary tuberculosis 54
            Silicotuberculosis 0
Path 2
Term Annotations click to browse term
  disease 14823
    disease by infectious agent 807
      Bacterial Infections and Mycoses 566
        bacterial infectious disease 485
          Gram-Positive Bacterial Infections 150
            Actinomycetales Infections 103
              Mycobacterium Infections 102
                tuberculosis 77
                  pulmonary tuberculosis 54
                    Silicotuberculosis 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.