ONTOLOGY REPORT - ANNOTATIONS


Term:interstitial lung disease
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Accession:DOID:3082 term browser browse the term
Definition:A diverse group of lung diseases that affect the lung parenchyma. They are characterized by an initial inflammation of PULMONARY ALVEOLI that extends to the interstitium and beyond leading to diffuse PULMONARY FIBROSIS. Interstitial lung diseases are classified by their etiology (known or unknown causes), and radiological-pathological features.
Synonyms:exact_synonym: ILD;   Interstitial Pneumonia;   Interstitial Pneumonias;   Interstitial Pneumonitides;   alveolitis;   diffuse parenchymal lung diseases;   interstitial lung diseases;   interstitial pneumonitis
 primary_id: MESH:D017563
 alt_id: RDO:0004807
 xref: GARD:13336
For additional species annotation, visit the Alliance of Genome Resources.


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interstitial lung disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap3b1 adaptor related protein complex 3 subunit beta 1 JBrowse link 2 24,022,815 24,227,522 RGD:11096518
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:8657022
G Ccl17 C-C motif chemokine ligand 17 JBrowse link 19 10,619,220 10,620,671 RGD:4145606
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:4142853
RGD:8549558
RGD:4891442
RGD:4891453
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:4891431
G Ccr2 C-C motif chemokine receptor 2 RGD:4145064
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:4892085
G Cd28 Cd28 molecule JBrowse link 9 67,546,408 67,573,858 RGD:5131613
G Cma1 chymase 1 JBrowse link 15 34,601,037 34,603,819 RGD:5128816
G Copa coatomer protein complex subunit alpha JBrowse link 13 90,467,285 90,508,894 RGD:11554173
G Cxcl10 C-X-C motif chemokine ligand 10 JBrowse link 14 17,210,733 17,212,930 RGD:5135305
RGD:5135306
G Cxcl9 C-X-C motif chemokine ligand 9 JBrowse link 14 17,228,832 17,233,743 RGD:5135305
RGD:5135306
G Des desmin JBrowse link 9 82,556,574 82,564,288 RGD:8554872
G Farsb phenylalanyl-tRNA synthetase subunit beta JBrowse link 9 84,324,456 84,383,674 RGD:8554872
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:8548623
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:4145416
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:4889547
RGD:5144220
RGD:4889883
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:4142806
RGD:7794767
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:4143199
RGD:4142853
G Il2 interleukin 2 JBrowse link 2 123,847,150 123,851,854 RGD:5144220
G Il4r interleukin 4 receptor JBrowse link 1 196,942,343 196,967,221 RGD:4890021
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:12910743
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:5130207
RGD:5130857
G Mpo myeloperoxidase JBrowse link 10 75,087,892 75,098,260 RGD:5130207
G Muc1 mucin 1, cell surface associated JBrowse link 2 188,543,137 188,547,874 RGD:5131176
RGD:4143496
RGD:5131173
G Ngf nerve growth factor JBrowse link 2 204,886,158 204,939,523 RGD:8657022
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:4891449
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 JBrowse link 18 31,728,373 32,704,022 RGD:4892567
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:4144846
G Sftpa1 surfactant protein A1 JBrowse link 16 18,716,019 18,719,404 RGD:4143449
RGD:4143430
G Sftpb surfactant protein B JBrowse link 4 100,166,855 100,175,941 RGD:4143377
RGD:4143430
G Sftpc surfactant protein C JBrowse link 15 52,211,538 52,214,480 RGD:4143400
RGD:4143413
RGD:4143430
RGD:4144064
RGD:4144126
G Sftpd surfactant protein D JBrowse link 16 18,753,535 18,766,100 RGD:4143449
RGD:4143496
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:11554173
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:4145270
G Tlr9 toll-like receptor 9 JBrowse link 8 114,916,122 114,920,171 RGD:5130206
anthracosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp1a4 ATPase Na+/K+ transporting subunit alpha 4 JBrowse link 13 90,605,792 90,642,032 RGD:11554173
G Flacc1 flagellum associated containing coiled-coil domains 1 JBrowse link 9 65,665,663 65,693,822 RGD:11554173
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:11554173
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:11554173
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:11554173
G Rbm26 RNA binding motif protein 26 JBrowse link 15 89,262,683 89,339,323 RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:11554173
anti-basement membrane glomerulonephritis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agt angiotensinogen JBrowse link 19 57,321,594 57,333,460 RGD:5129185
RGD:11039051
G Agtr1a angiotensin II receptor, type 1a JBrowse link 17 35,907,102 35,958,136 RGD:5129185
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:1579984
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:1579984
G Ccl17 C-C motif chemokine ligand 17 JBrowse link 19 10,619,220 10,620,671 RGD:4145614
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:2307059
RGD:4145614
RGD:6218988
G Ccl22 C-C motif chemokine ligand 22 JBrowse link 19 10,674,189 10,681,145 RGD:2306306
G Ccl4 C-C motif chemokine ligand 4 JBrowse link 10 70,870,926 70,886,357 RGD:2307059
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:2307059
G Cd274 CD274 molecule JBrowse link 1 247,519,890 247,539,659 RGD:7248671
G Cd40 CD40 molecule JBrowse link 3 161,519,789 161,534,943 RGD:7248442
G Cd40lg CD40 ligand JBrowse link X 159,703,703 159,714,886 RGD:5508170
G Cd80 Cd80 molecule JBrowse link 11 64,815,201 64,855,293 RGD:6902936
G Cfb complement factor B JBrowse link 20 4,536,206 4,542,073 RGD:7242700
G Clu clusterin JBrowse link 15 42,626,612 42,665,858 RGD:9068422
G Csf1 colony stimulating factor 1 JBrowse link 2 210,522,370 210,550,546 RGD:7257569
G Csf1r colony stimulating factor 1 receptor JBrowse link 18 56,414,493 56,458,300 RGD:7257569
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 JBrowse link 9 67,699,397 67,706,068 RGD:6902936
RGD:11352257
G Cx3cl1 C-X3-C motif chemokine ligand 1 JBrowse link 19 10,644,267 10,654,861 RGD:4891946
G Cx3cr1 C-X3-C motif chemokine receptor 1 JBrowse link 8 128,740,756 128,754,514 RGD:4891946
G Cxcl12 C-X-C motif chemokine ligand 12 JBrowse link 4 149,261,044 149,273,891 RGD:2306579
G Dusp1 dual specificity phosphatase 1 JBrowse link 10 16,970,642 16,973,425 RGD:633769
G Fcgr3a Fc fragment of IgG receptor IIIa JBrowse link 13 89,385,775 89,396,047 RGD:5508400
RGD:5508403
G Gp6 glycoprotein VI JBrowse link 1 72,994,977 73,064,639 RGD:7242710
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:7365004
G Il17a interleukin 17A JBrowse link 9 26,841,299 26,844,786 RGD:7365004
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:6893447
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:6893447
RGD:7401232
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:4145614
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:2317673
RGD:2307059
G Itga4 integrin subunit alpha 4 JBrowse link 3 66,178,745 66,265,547 RGD:2308810
RGD:9698425
G Mapk14 mitogen activated protein kinase 14 JBrowse link 20 5,933,290 5,995,137 RGD:6218988
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 16 9,620,854 9,709,342 RGD:6218988
G Mif macrophage migration inhibitory factor JBrowse link 20 13,715,219 13,732,980 RGD:1642011
G Mmp12 matrix metallopeptidase 12 JBrowse link 8 5,594,717 5,616,494 RGD:6218988
G Mmp14 matrix metallopeptidase 14 JBrowse link 15 33,074,441 33,083,666 RGD:2314954
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:6218988
G Nppb natriuretic peptide B JBrowse link 5 164,796,176 164,797,538 RGD:7248605
G Pdcd1 programmed cell death 1 JBrowse link 9 101,305,742 101,319,937 RGD:7248671
G Ppara peroxisome proliferator activated receptor alpha JBrowse link 7 126,618,872 126,687,282 RGD:5563035
G Ptk2b protein tyrosine kinase 2 beta JBrowse link 15 42,827,306 42,947,796 RGD:729912
G Rapgef1 Rap guanine nucleotide exchange factor 1 JBrowse link 3 8,189,594 8,307,077 RGD:11534983
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:5147561
G Selp selectin P JBrowse link 13 82,428,914 82,464,629 RGD:6218988
G Slc34a1 solute carrier family 34 member 1 JBrowse link 17 9,747,766 9,762,739 RGD:7242947
G Slit2 slit guidance ligand 2 JBrowse link 14 66,831,848 67,171,491 RGD:2316132
G Spp1 secreted phosphoprotein 1 JBrowse link 14 6,673,686 6,679,965 RGD:6903276
G Syk spleen associated tyrosine kinase JBrowse link 17 12,614,311 12,669,568 RGD:6218988
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:6218988
G Vcam1 vascular cell adhesion molecule 1 JBrowse link 2 219,071,193 219,090,931 RGD:7241232
G Xcl1 X-C motif chemokine ligand 1 JBrowse link 13 83,199,402 83,202,845 RGD:8693304
asbestosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arg1 arginase 1 JBrowse link 1 21,525,421 21,537,872 RGD:11554173
G Atf6 activating transcription factor 6 JBrowse link 13 89,053,457 89,242,531 RGD:11554173
G Cfd complement factor D JBrowse link 7 12,634,216 12,635,939 RGD:11554173
G Clca1 chloride channel accessory 1 JBrowse link 2 250,897,980 250,923,711 RGD:4145655
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:4892076
G Ddit3 DNA-damage inducible transcript 3 JBrowse link 7 70,578,564 70,585,074 RGD:11554173
G Ephx1 epoxide hydrolase 1 JBrowse link 13 99,271,390 99,300,580 RGD:4889408
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:5490588
G Gstt1 glutathione S-transferase theta 1 JBrowse link 20 13,799,102 13,816,527 RGD:11554173
G Hspa5 heat shock protein family A (Hsp70) member 5 JBrowse link 3 13,838,304 13,842,763 RGD:11554173
G Nlrp3 NLR family, pyrin domain containing 3 JBrowse link 10 45,884,324 45,918,290 RGD:11554173
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:4891441
RGD:11554173
RGD:4891438
G Prdx1 peroxiredoxin 1 JBrowse link 5 135,536,413 135,551,986 RGD:11554173
G Prdx2 peroxiredoxin 2 JBrowse link 19 26,084,816 26,090,095 RGD:11554173
G Serpina1 serpin family A member 1 JBrowse link 6 127,610,241 127,632,265 RGD:11554173
G Spp1 secreted phosphoprotein 1 JBrowse link 14 6,673,686 6,679,965 RGD:11554173
G Tnc tenascin C JBrowse link 5 79,789,686 79,874,555 RGD:4889594
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:11554173
G Tpm4 tropomyosin 4 JBrowse link 16 19,385,810 19,399,851 RGD:11554173
AUTOIMMUNE INTERSTITIAL LUNG, JOINT, AND KIDNEY DISEASE term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Copa coatomer protein complex subunit alpha JBrowse link 13 90,467,285 90,508,894 RGD:7240710
RGD:8554872
berylliosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ace angiotensin I converting enzyme JBrowse link 10 94,170,766 94,213,831 RGD:11554173
G Btnl2 butyrophilin-like 2 JBrowse link 20 4,140,184 4,156,365 RGD:9685029
RGD:11554173
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:4892065
G Cd28 Cd28 molecule JBrowse link 9 67,546,408 67,573,858 RGD:11554173
G Gclm glutamate cysteine ligase, modifier subunit JBrowse link 2 225,827,504 225,847,876 RGD:11554173
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:4145349
G Il2ra interleukin 2 receptor subunit alpha JBrowse link 17 70,500,672 70,547,929 RGD:11554173
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:11554173
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:11554173
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:4145294
RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:11554173
bird fancier's lung term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Muc1 mucin 1, cell surface associated JBrowse link 2 188,543,137 188,547,874 RGD:5131172
bronchiolitis obliterans term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ace angiotensin I converting enzyme JBrowse link 10 94,170,766 94,213,831 RGD:4140933
G Adora2a adenosine A2a receptor JBrowse link 20 14,265,251 14,282,873 RGD:4890362
G Ccl17 C-C motif chemokine ligand 17 JBrowse link 19 10,619,220 10,620,671 RGD:4145604
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:2307195
G Ccl22 C-C motif chemokine ligand 22 JBrowse link 19 10,674,189 10,681,145 RGD:4891471
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:4889978
RGD:2307195
G Ccl7 C-C motif chemokine ligand 7 JBrowse link 10 69,423,083 69,424,933 RGD:6483763
G Ccr2 C-C motif chemokine receptor 2 RGD:4145124
G Cd86 CD86 molecule JBrowse link 11 67,060,305 67,117,990 RGD:2307206
G Csf2 colony stimulating factor 2 JBrowse link 10 39,602,089 39,604,070 RGD:2317286
G Cxcl10 C-X-C motif chemokine ligand 10 JBrowse link 14 17,210,733 17,212,930 RGD:5135441
RGD:5135451
G Cxcl11 C-X-C motif chemokine ligand 11 JBrowse link 14 17,195,395 17,198,170 RGD:5135451
G Cxcl9 C-X-C motif chemokine ligand 9 JBrowse link 14 17,228,832 17,233,743 RGD:5135441
RGD:5135451
G Cxcr3 C-X-C motif chemokine receptor 3 JBrowse link X 71,614,346 71,616,997 RGD:5135441
RGD:5135451
G Edn1 endothelin 1 JBrowse link 17 22,136,814 22,143,745 RGD:8662402
G Gzmb granzyme B JBrowse link 15 35,413,862 35,417,293 RGD:5135518
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:4145412
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:11554173
G Il13 interleukin 13 JBrowse link 10 38,982,909 38,985,466 RGD:4146242
G Il13ra1 interleukin 13 receptor subunit alpha 1 JBrowse link X 122,724,081 122,783,801 RGD:4146242
G Il13ra2 interleukin 13 receptor subunit alpha 2 JBrowse link X 118,443,955 118,514,716 RGD:4146242
G Il17a interleukin 17A JBrowse link 9 26,841,299 26,844,786 RGD:4143277
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:4143176
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:2317286
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:4143277
G Mbl2 mannose binding lectin 2 JBrowse link 1 248,435,069 248,442,669 RGD:4889456
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:5130759
G Muc1 mucin 1, cell surface associated JBrowse link 2 188,543,137 188,547,874 RGD:5131273
G Nod2 nucleotide-binding oligomerization domain containing 2 JBrowse link 19 19,342,061 19,389,366 RGD:5131450
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:4892082
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:4892068
G Scgb1a1 secretoglobin family 1A member 1 JBrowse link 1 225,279,698 225,283,246 RGD:5147386
G Sftpd surfactant protein D JBrowse link 16 18,753,535 18,766,100 RGD:4143500
G Tlr9 toll-like receptor 9 JBrowse link 8 114,916,122 114,920,171 RGD:5130722
cryptogenic organizing pneumonia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:5131112
G Tnfrsf1b TNF receptor superfamily member 1B JBrowse link 5 163,136,390 163,167,299 RGD:5131112
desquamative interstitial pneumonia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sftpc surfactant protein C JBrowse link 15 52,211,538 52,214,480 RGD:13592920
extrinsic allergic alveolitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ace angiotensin I converting enzyme JBrowse link 10 94,170,766 94,213,831 RGD:4140920
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:4891434
RGD:4891436
G Ccl7 C-C motif chemokine ligand 7 JBrowse link 10 69,423,083 69,424,933 RGD:5130978
G Ccr3 C-C motif chemokine receptor 3 JBrowse link 8 133,026,539 133,040,999 RGD:4145620
G Cd86 CD86 molecule JBrowse link 11 67,060,305 67,117,990 RGD:4892294
G Cxcl10 C-X-C motif chemokine ligand 10 JBrowse link 14 17,210,733 17,212,930 RGD:5135448
RGD:5135490
G Cxcl11 C-X-C motif chemokine ligand 11 JBrowse link 14 17,195,395 17,198,170 RGD:5135448
G Cxcl9 C-X-C motif chemokine ligand 9 JBrowse link 14 17,228,832 17,233,743 RGD:5135448
RGD:5135490
G Cxcr3 C-X-C motif chemokine receptor 3 JBrowse link X 71,614,346 71,616,997 RGD:5135448
RGD:4145620
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:4892076
G Il13 interleukin 13 JBrowse link 10 38,982,909 38,985,466 RGD:4145650
RGD:5128548
G Il17a interleukin 17A JBrowse link 9 26,841,299 26,844,786 RGD:4888525
RGD:4889106
G Il17ra interleukin 17 receptor A JBrowse link 4 152,995,865 153,018,394 RGD:5144217
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:4142832
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:4142842
RGD:7401229
G Il5 interleukin 5 JBrowse link 10 39,066,716 39,069,587 RGD:4889106
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:4891449
G Sftpa1 surfactant protein A1 JBrowse link 16 18,716,019 18,719,404 RGD:4143437
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:11554173
G Tap1 transporter 1, ATP binding cassette subfamily B member JBrowse link 20 3,979,302 3,989,669 RGD:5147840
G Tlr6 toll-like receptor 6 JBrowse link 14 45,024,351 45,041,188 RGD:4889532
G Tnc tenascin C JBrowse link 5 79,789,686 79,874,555 RGD:4889595
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:4142832
RGD:4143466
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:5131148
G Tnfrsf1b TNF receptor superfamily member 1B JBrowse link 5 163,136,390 163,167,299 RGD:5131148
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:5684419
farmer's lung term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il12b interleukin 12B JBrowse link 10 30,034,447 30,048,774 RGD:4145430
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:4143375
RGD:4143374
granulomatosis with polyangiitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccr3 C-C motif chemokine receptor 3 JBrowse link 8 133,026,539 133,040,999 RGD:4145634
RGD:6893409
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:4892114
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:6893495
G Cd40lg CD40 ligand JBrowse link X 159,703,703 159,714,886 RGD:5490596
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 JBrowse link 9 67,699,397 67,706,068 RGD:7204724
G Fcar Fc fragment of IgA receptor JBrowse link 1 73,230,392 73,263,462 RGD:7242064
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:8548880
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:1580480
G Prtn3 proteinase 3 JBrowse link 7 12,643,712 12,646,951 RGD:11554173
G Thbd thrombomodulin JBrowse link 3 142,748,673 142,752,325 RGD:5684985
G Vtn vitronectin JBrowse link 10 65,767,960 65,771,040 RGD:1580817
idiopathic interstitial pneumonia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cxcl6 C-X-C motif chemokine ligand 6 JBrowse link 14 18,860,201 18,920,839 RGD:5135258
RGD:5135260
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:4145518
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:11062092
G Keap1 Kelch-like ECH-associated protein 1 JBrowse link 8 22,250,518 22,259,868 RGD:6893300
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:7245946
G Scgb1a1 secretoglobin family 1A member 1 JBrowse link 1 225,279,698 225,283,246 RGD:5144148
idiopathic pulmonary fibrosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca3 ATP binding cassette subfamily A member 3 JBrowse link 10 13,723,365 13,780,558 RGD:8554872
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:5508222
G Atp11a ATPase phospholipid transporting 11A JBrowse link 16 81,990,340 82,100,222 RGD:11554173
G Bmp1 bone morphogenetic protein 1 JBrowse link 15 52,166,401 52,210,786 RGD:8554872
G Brd4 bromodomain containing 4 JBrowse link 7 14,222,101 14,303,055 RGD:9586353
G Ccl12 chemokine (C-C motif) ligand 12 JBrowse link 10 69,476,866 69,478,416 RGD:11554173
G Cflar CASP8 and FADD-like apoptosis regulator JBrowse link 9 65,534,608 65,586,395 RGD:11341695
G Ctc1 CST telomere replication complex component 1 JBrowse link 10 55,596,172 55,616,873 RGD:8554872
G Cxcl6 C-X-C motif chemokine ligand 6 JBrowse link 14 18,860,201 18,920,839 RGD:5135241
RGD:5135250
G Dpp9 dipeptidyl peptidase 9 JBrowse link 9 10,846,493 10,882,560 RGD:11554173
G Dsp desmoplakin JBrowse link 17 27,286,811 27,334,453 RGD:11554173
G Dtnbp1 dystrobrevin binding protein 1 JBrowse link 17 20,090,136 20,182,332 RGD:8554872
G Ehmt2 euchromatic histone lysine methyltransferase 2 JBrowse link 20 4,576,033 4,592,980 RGD:9589169
G F3 coagulation factor III, tissue factor JBrowse link 2 225,310,686 225,322,281 RGD:11060143
G Fam13a family with sequence similarity 13, member A JBrowse link 4 89,183,180 89,281,282 RGD:11554173
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:11049166
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:11049166
G Fosl2 FOS like 2, AP-1 transcription factor subunit JBrowse link 6 25,598,936 25,616,995 RGD:13592920
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:11554173
G Hps4 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 JBrowse link 12 50,285,239 50,315,893 RGD:8554872
G Il1rl1 interleukin 1 receptor-like 1 JBrowse link 9 47,133,483 47,184,316 RGD:5144236
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:8554872
G Il2ra interleukin 2 receptor subunit alpha JBrowse link 17 70,500,672 70,547,929 RGD:5147438
G Lama3 laminin subunit alpha 3 JBrowse link 18 3,704,866 3,941,215 RGD:8554872
G Mmp1 matrix metallopeptidase 1 JBrowse link 8 5,703,206 5,723,593 RGD:4890373
RGD:8554872
G Mmp19 matrix metallopeptidase 19 JBrowse link 7 3,216,392 3,224,202 RGD:8554872
G Mmp3 matrix metallopeptidase 3 JBrowse link 8 5,676,608 5,698,579 RGD:8694097
RGD:11554173
G Muc1 mucin 1, cell surface associated JBrowse link 2 188,543,137 188,547,874 RGD:7244290
G Muc5b mucin 5B, oligomeric mucus/gel-forming JBrowse link 1 214,778,459 214,811,237 RGD:7240710
RGD:8554872
RGD:11554173
G Ntrk2 neurotrophic receptor tyrosine kinase 2 JBrowse link 17 5,934,651 6,245,778 RGD:5684550
G Parn poly(A)-specific ribonuclease JBrowse link 10 1,309,724 1,461,123 RGD:11554173
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:10413908
G Plau plasminogen activator, urokinase JBrowse link 15 3,644,296 3,650,765 RGD:11554173
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:5135280
RGD:5135507
RGD:5135461
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:5147566
G Rtel1 regulator of telomere elongation helicase 1 JBrowse link 3 176,818,012 176,856,531 RGD:8554872
RGD:11554173
G Rtkn2 rhotekin 2 JBrowse link 20 21,919,486 22,004,279 RGD:8554872
G Sftpa1 surfactant protein A1 JBrowse link 16 18,716,019 18,719,404 RGD:8554872
G Sftpc surfactant protein C JBrowse link 15 52,211,538 52,214,480 RGD:11554173
RGD:8554872
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:6892915
G Stn1 STN1 subunit of CST complex JBrowse link 1 267,281,786 267,315,714 RGD:11554173
G Terc telomerase RNA component JBrowse link 2 116,432,723 116,433,110 RGD:8554872
RGD:11554173
G Tert telomerase reverse transcriptase JBrowse link 1 32,250,876 32,275,330 RGD:8554872
RGD:11554173
RGD:11038666
G Tfpi tissue factor pathway inhibitor JBrowse link 3 71,852,738 71,902,127 RGD:11060143
G Thbd thrombomodulin JBrowse link 3 142,748,673 142,752,325 RGD:5685036
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:13592920
G Wnt5a Wnt family member 5A JBrowse link 16 4,469,451 4,490,271 RGD:11554173
INTERSTITIAL LUNG AND LIVER DISEASE term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arhgap9 Rho GTPase activating protein 9 JBrowse link 7 70,612,650 70,620,900 RGD:8554872
G Farsb phenylalanyl-tRNA synthetase subunit beta JBrowse link 9 84,324,456 84,383,674 RGD:8554872
G Mars methionyl-tRNA synthetase JBrowse link 7 70,585,011 70,602,425 RGD:8554872
RGD:7240710
Interstitial Lung Disease, Nephrotic Syndrome, and Epidermolysis Bullosa, Congenital term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Itga3 integrin subunit alpha 3 JBrowse link 10 82,855,841 82,887,755 RGD:7240710
RGD:8554872
Langerhans-cell histiocytosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:13592920
pneumoconiosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acan aggrecan JBrowse link 1 140,762,758 140,824,441 RGD:11554173
G Atr ATR serine/threonine kinase JBrowse link 8 103,673,578 103,770,886 RGD:11554173
G Ca3 carbonic anhydrase 3 JBrowse link 2 88,126,519 88,136,063 RGD:11554173
G Car1 carbonic anhydrase 1 JBrowse link 2 88,185,204 88,227,486 RGD:11554173
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:5130756
G Cdh23 cadherin-related 23 JBrowse link 20 29,857,018 30,263,758 RGD:11554173
G Hist3h3 histone cluster 3, H3 JBrowse link 10 45,304,696 45,305,106 RGD:11554173
G Hs3st6 heparan sulfate-glucosamine 3-sulfotransferase 6 JBrowse link 10 14,122,856 14,128,984 RGD:11554173
G Il27ra interleukin 27 receptor subunit alpha JBrowse link 19 25,151,835 25,163,995 RGD:11554173
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:11554173
G Mdm4 MDM4 regulator of p53 JBrowse link 13 49,786,776 49,828,780 RGD:11554173
G Ptprz1 protein tyrosine phosphatase, receptor type Z1 JBrowse link 4 49,941,046 50,140,764 RGD:11554173
G RT1-Bb RT1 class II, locus Bb JBrowse link 20 4,043,726 4,049,367 RGD:7421557
G Ticam1 toll-like receptor adaptor molecule 1 JBrowse link 9 10,780,185 10,790,280 RGD:11554173
G Tmprss3 transmembrane serine protease 3 JBrowse link 20 9,910,522 9,929,705 RGD:11554173
pulmonary fibrosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca3 ATP binding cassette subfamily A member 3 JBrowse link 10 13,723,365 13,780,558 RGD:11554173
G Ace angiotensin I converting enzyme JBrowse link 10 94,170,766 94,213,831 RGD:4140923
RGD:4140925
RGD:4140478
RGD:4140483
G Ace2 angiotensin I converting enzyme 2 JBrowse link X 32,050,734 32,095,860 RGD:4140483
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link 11 81,330,845 81,344,488 RGD:11554173
G Ager advanced glycosylation end product-specific receptor JBrowse link 20 4,363,152 4,366,079 RGD:7245533
RGD:8695997
G Agt angiotensinogen JBrowse link 19 57,321,594 57,333,460 RGD:11039408
RGD:11554173
G Agtr1a angiotensin II receptor, type 1a JBrowse link 17 35,907,102 35,958,136 RGD:5147454
G Agtr2 angiotensin II receptor, type 2 JBrowse link X 119,389,480 119,393,845 RGD:5147454
G Alox5 arachidonate 5-lipoxygenase JBrowse link 4 148,398,004 148,446,308 RGD:4890430
G Anxa1 annexin A1 JBrowse link 1 237,893,983 237,910,002 RGD:2306948
G Ap3b1 adaptor related protein complex 3 subunit beta 1 JBrowse link 2 24,022,815 24,227,522 RGD:1578409
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:5508222
G Areg amphiregulin JBrowse link 14 18,521,921 18,531,179 RGD:11554173
G B3gat1 beta-1,3-glucuronyltransferase 1 JBrowse link 8 27,777,024 27,804,368 RGD:14390076
G Bad BCL2-associated agonist of cell death JBrowse link 1 222,198,516 222,207,459 RGD:2292680
G Bdkrb1 bradykinin receptor B1 JBrowse link 6 129,437,423 129,441,553 RGD:5129229
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:4891121
G Bmp7 bone morphogenetic protein 7 JBrowse link 3 170,879,972 170,955,820 RGD:11554173
G Brd4 bromodomain containing 4 JBrowse link 7 14,222,101 14,303,055 RGD:9586353
G Calca calcitonin-related polypeptide alpha JBrowse link 1 184,184,018 184,188,922 RGD:11554173
G Calr calreticulin JBrowse link 19 25,956,771 25,961,666 RGD:2326172
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:5130199
RGD:11554173
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:8661773
G Ccl11 C-C motif chemokine ligand 11 JBrowse link 10 69,434,965 69,439,566 RGD:4145458
RGD:11554173
RGD:4145395
G Ccl17 C-C motif chemokine ligand 17 JBrowse link 19 10,619,220 10,620,671 RGD:2306304
RGD:4145488
G Ccl19 C-C motif chemokine ligand 19 JBrowse link 5 58,181,025 58,182,969 RGD:5130910
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:4145112
RGD:11554173
RGD:8549730
G Ccl21 C-C motif chemokine ligand 21 JBrowse link 5 58,197,678 58,198,782 RGD:5130910
G Ccl22 C-C motif chemokine ligand 22 JBrowse link 19 10,674,189 10,681,145 RGD:2306304
RGD:4145488
G Ccl3 C-C motif chemokine ligand 3 JBrowse link 10 70,869,516 70,871,066 RGD:11554173
G Ccl4 C-C motif chemokine ligand 4 JBrowse link 10 70,870,926 70,886,357 RGD:11554173
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:4145112
RGD:11554173
G Ccn2 cellular communication network factor 2 JBrowse link 1 21,851,657 21,854,773 RGD:2314537
RGD:11554173
G Ccr2 C-C motif chemokine receptor 2 RGD:4145065
RGD:11554173
G Ccr3 C-C motif chemokine receptor 3 JBrowse link 8 133,026,539 133,040,999 RGD:4145395
RGD:11554173
G Ccr4 C-C motif chemokine receptor 4 JBrowse link 8 122,530,152 122,535,959 RGD:2306304
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:4892101
RGD:4145622
G Ccr8 C-C motif chemokine receptor 8 JBrowse link 8 128,779,552 128,782,531 RGD:2306304
G Cd28 Cd28 molecule JBrowse link 9 67,546,408 67,573,858 RGD:4892281
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:2307220
RGD:6893557
G Cd86 CD86 molecule JBrowse link 11 67,060,305 67,117,990 RGD:4892281
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:5132892
RGD:5132890
G Cebpa CCAAT/enhancer binding protein alpha JBrowse link 1 91,363,492 91,366,164 RGD:11554173
G Cebpb CCAAT/enhancer binding protein beta JBrowse link 3 164,424,502 164,425,933 RGD:11554173
G Cfd complement factor D JBrowse link 7 12,634,216 12,635,939 RGD:11554173
G Cflar CASP8 and FADD-like apoptosis regulator JBrowse link 9 65,534,608 65,586,395 RGD:11341695
G Chi3l1 chitinase 3 like 1 JBrowse link 13 51,022,844 51,030,797 RGD:4892653
G Chrm3 cholinergic receptor, muscarinic 3 JBrowse link 17 63,990,599 64,463,222 RGD:5133440
G Cma1 chymase 1 JBrowse link 15 34,601,037 34,603,819 RGD:11554173
G Col1a1 collagen type I alpha 1 chain JBrowse link 10 82,745,801 82,762,790 RGD:7257543
RGD:11041177
G Col1a2 collagen type I alpha 2 chain JBrowse link 4 31,534,225 31,569,152 RGD:7257543
G Col3a1 collagen type III alpha 1 chain JBrowse link 9 52,023,295 52,059,221 RGD:11554173
G Csf2 colony stimulating factor 2 JBrowse link 10 39,602,089 39,604,070 RGD:10449530
RGD:11554173
G Csf3 colony stimulating factor 3 JBrowse link 10 86,616,785 86,619,160 RGD:11554173
G Cxcl2 C-X-C motif chemokine ligand 2 JBrowse link 14 18,731,346 18,733,391 RGD:11554173
G Cxcr2 C-X-C motif chemokine receptor 2 JBrowse link 9 81,427,275 81,435,065 RGD:5134989
G Cxcr3 C-X-C motif chemokine receptor 3 JBrowse link X 71,614,346 71,616,997 RGD:5135446
G Cysltr1 cysteinyl leukotriene receptor 1 JBrowse link X 77,671,028 77,700,491 RGD:4847792
RGD:4781441
G Cysltr2 cysteinyl leukotriene receptor 2 JBrowse link 15 54,903,290 54,941,742 RGD:4781445
RGD:11554173
RGD:5143997
G Defb1 defensin beta 1 JBrowse link 16 75,294,385 75,309,127 RGD:4892262
G Defb4 defensin beta 4 JBrowse link 16 75,634,598 75,637,789 RGD:4892262
G Dsp desmoplakin JBrowse link 17 27,286,811 27,334,453 RGD:11554173
G Edn1 endothelin 1 JBrowse link 17 22,136,814 22,143,745 RGD:4144892
RGD:11554173
RGD:4144889
RGD:4144866
G Egf epidermal growth factor JBrowse link 2 68,820,616 68,895,537 RGD:11554173
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:5131873
RGD:5131634
RGD:5131638
G Egr1 early growth response 1 JBrowse link 18 27,657,903 27,660,101 RGD:4144870
RGD:5131644
RGD:5131877
G Elane elastase, neutrophil expressed JBrowse link 7 12,638,320 12,640,168 RGD:10450562
G Eln elastin JBrowse link 12 24,978,478 25,021,864 RGD:11554173
G F2 coagulation factor II JBrowse link 3 80,529,468 80,542,993 RGD:5147767
G F5 coagulation factor V JBrowse link 13 82,479,997 82,535,540 RGD:11564339
G Fam13a family with sequence similarity 13, member A JBrowse link 4 89,183,180 89,281,282 RGD:11554173
G Fgf1 fibroblast growth factor 1 JBrowse link 18 32,273,830 32,359,831 RGD:11554173
G Fgf2 fibroblast growth factor 2 JBrowse link 2 124,081,072 124,134,133 RGD:11554173
G Fgf7 fibroblast growth factor 7 JBrowse link 3 118,315,859 118,368,464 RGD:11554173
G Fn1 fibronectin 1 JBrowse link 9 78,900,111 78,969,018 RGD:11554173
G Fyn FYN proto-oncogene, Src family tyrosine kinase JBrowse link 20 44,436,354 44,630,316 RGD:11554173
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link 3 105,203,309 105,214,989 RGD:11554173
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:4142516
G Habp2 hyaluronan binding protein 2 JBrowse link 1 277,068,715 277,104,567 RGD:11353855
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:8548628
RGD:11554173
G Hmgb1 high mobility group box 1 JBrowse link 12 7,082,529 7,090,246 RGD:11554173
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:11554173
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 JBrowse link 9 17,817,791 17,823,163 RGD:10445835
G Hspa5 heat shock protein family A (Hsp70) member 5 JBrowse link 3 13,838,304 13,842,763 RGD:5685632
G Hspd1 heat shock protein family D (Hsp60) member 1 JBrowse link 9 61,680,529 61,691,202 RGD:12910545
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:4145516
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:11554173
G Igfbp3 insulin-like growth factor binding protein 3 JBrowse link 14 87,457,647 87,465,374 RGD:1626120
G Igfbp5 insulin-like growth factor binding protein 5 JBrowse link 9 80,154,230 80,166,813 RGD:1626120
G Il12b interleukin 12B JBrowse link 10 30,034,447 30,048,774 RGD:4889581
RGD:11554173
RGD:4888529
G Il13 interleukin 13 JBrowse link 10 38,982,909 38,985,466 RGD:4145627
RGD:11554173
RGD:4888529
RGD:2314537
G Il15 interleukin 15 JBrowse link 19 23,542,606 23,624,366 RGD:5147438
G Il17a interleukin 17A JBrowse link 9 26,841,299 26,844,786 RGD:4888529
RGD:9179762
RGD:4889110
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:4889581
RGD:4889841
G Il18r1 interleukin 18 receptor 1 JBrowse link 9 47,184,404 47,217,403 RGD:4889841
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:4142803
RGD:4142838
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:4142813
RGD:11554173
RGD:7193137
RGD:4142535
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:4142874
RGD:11554173
RGD:4143194
RGD:4143177
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:5128555
RGD:11554173
RGD:10402793
RGD:5128548
G Il5 interleukin 5 JBrowse link 10 39,066,716 39,069,587 RGD:4890954
RGD:11554173
RGD:4890942
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:4143241
RGD:11554173
G Il9 interleukin 9 JBrowse link 17 8,558,827 8,561,950 RGD:5128702
G Lamb1 laminin subunit beta 1 JBrowse link 6 50,528,796 50,596,593 RGD:11554173
G Lepr leptin receptor JBrowse link 5 120,503,475 120,682,281 RGD:5128773
G Mbl2 mannose binding lectin 2 JBrowse link 1 248,435,069 248,442,669 RGD:4889479
G Mecp2 methyl CpG binding protein 2 JBrowse link X 156,650,389 156,713,813 RGD:11554173
G Mfn2 mitofusin 2 JBrowse link 5 164,684,244 164,715,414 RGD:13204824
G Mir101a microRNA 101a JBrowse link 5 120,168,437 120,168,511 RGD:11554173
G Mir10a microRNA 10a JBrowse link 10 84,165,950 84,166,059 RGD:11554173
G Mir122 microRNA 122 JBrowse link 18 60,755,285 60,755,369 RGD:11554173
G Mir125a microRNA 125a JBrowse link 1 59,704,827 59,704,911 RGD:11554173
G Mir140 microRNA 140 JBrowse link 19 39,608,951 39,609,049 RGD:11554173
G Mir145 microRNA 145 JBrowse link 18 56,969,907 56,969,994 RGD:11554173
G Mir200c microRNA 200c JBrowse link 4 157,236,786 157,236,854 RGD:11554173
G Mir26b microRNA 26b JBrowse link 9 81,675,275 81,675,359 RGD:11554173
G Mir30a microRNA 30a JBrowse link 9 29,542,635 29,542,705 RGD:11554173
G Mir326 microRNA 326 JBrowse link 1 164,518,401 164,518,495 RGD:11554173
G Mir345 microRNA 345 JBrowse link 6 132,748,968 132,749,063 RGD:11554173
G Mir3557 microRNA 3557 JBrowse link 18 56,726,128 56,726,240 RGD:11554173
G Mir425 microRNA 425 JBrowse link 8 117,354,821 117,354,903 RGD:11554173
G Mmp1 matrix metallopeptidase 1 JBrowse link 8 5,703,206 5,723,593 RGD:7207277
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:11554173
G Mmp3 matrix metallopeptidase 3 JBrowse link 8 5,676,608 5,698,579 RGD:8694097
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:1642054
RGD:13204970
RGD:11554173
G Mt2A metallothionein 2A JBrowse link 19 11,307,966 11,308,740 RGD:11554173
G Muc5ac mucin 5AC, oligomeric mucus/gel-forming JBrowse link 1 214,725,482 214,756,653 RGD:5131207
RGD:2314537
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:6893396
RGD:11554173
G Ngf nerve growth factor JBrowse link 2 204,886,158 204,939,523 RGD:4891121
G Ngfr nerve growth factor receptor JBrowse link 10 83,389,828 83,408,061 RGD:5144067
G Nkx2-5 NK2 homeobox 5 JBrowse link 10 16,635,989 16,638,758 RGD:5131637
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:4891482
G Ntrk2 neurotrophic receptor tyrosine kinase 2 JBrowse link 17 5,934,651 6,245,778 RGD:5684550
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:10413908
RGD:11554173
G Pdgfa platelet derived growth factor subunit A JBrowse link 12 17,734,141 17,756,186 RGD:11554173
G Pdgfb platelet derived growth factor subunit B JBrowse link 7 121,215,458 121,233,092 RGD:6482756
RGD:11554173
RGD:6482831
G Pdgfra platelet derived growth factor receptor alpha JBrowse link 14 35,527,926 35,581,130 RGD:11080970
G Plau plasminogen activator, urokinase JBrowse link 15 3,644,296 3,650,765 RGD:7241204
RGD:7241544
RGD:7241206
G Psen2 presenilin 2 JBrowse link 13 98,513,600 98,539,347 RGD:1302521
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:1642597
RGD:5135504
G Ptx3 pentraxin 3 JBrowse link 2 158,097,843 158,103,653 RGD:11554173
G Scgb1a1 secretoglobin family 1A member 1 JBrowse link 1 225,279,698 225,283,246 RGD:5144130
RGD:5144139
G Scgb3a2 secretoglobin, family 3A, member 2 JBrowse link 18 38,292,822 38,295,744 RGD:5144129
G Serpina1 serpin family A member 1 JBrowse link 6 127,610,241 127,632,265 RGD:11554173
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:4143513
RGD:8547927
RGD:4144842
G Sftpa1 surfactant protein A1 JBrowse link 16 18,716,019 18,719,404 RGD:4144870
RGD:4143409
RGD:4143437
G Sftpb surfactant protein B JBrowse link 4 100,166,855 100,175,941 RGD:4143409
G Sftpc surfactant protein C JBrowse link 15 52,211,538 52,214,480 RGD:4144060
RGD:4144124
G Skil SKI-like proto-oncogene JBrowse link 2 115,862,932 115,891,304 RGD:11554173
G Smad4 SMAD family member 4 JBrowse link 18 69,626,682 69,657,373 RGD:12880047
RGD:12880048
G Smad7 SMAD family member 7 JBrowse link 18 71,395,830 71,424,164 RGD:11554173
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:11554173
G Sod3 superoxide dismutase 3 JBrowse link 14 60,958,583 60,971,143 RGD:11554173
G Spp1 secreted phosphoprotein 1 JBrowse link 14 6,673,686 6,679,965 RGD:11554173
G Stat1 signal transducer and activator of transcription 1 JBrowse link 9 54,287,540 54,327,958 RGD:1600092
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:6892915
RGD:11554173
G Stat6 signal transducer and activator of transcription 6 JBrowse link 7 70,946,228 70,963,542 RGD:11554173
G Tfpi tissue factor pathway inhibitor JBrowse link 3 71,852,738 71,902,127 RGD:11062084
G Tgfa transforming growth factor alpha JBrowse link 4 117,961,877 118,045,923 RGD:11554173
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:4145279
RGD:11554173
RGD:4145112
RGD:2307220
RGD:4145133
G Tgfbr2 transforming growth factor, beta receptor 2 JBrowse link 8 124,310,288 124,399,345 RGD:1601591
G Timp1 TIMP metallopeptidase inhibitor 1 JBrowse link X 1,364,771 1,369,451 RGD:11554173
RGD:13204970
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:4145324
RGD:4144177
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:4144177
RGD:4144120
G Tlr9 toll-like receptor 9 JBrowse link 8 114,916,122 114,920,171 RGD:5130206
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:4142851
RGD:11554173
RGD:4143258
RGD:2314537
RGD:4143417
G Twist1 twist family bHLH transcription factor 1 JBrowse link 6 53,401,241 53,403,235 RGD:5131599
G Vwf von Willebrand factor JBrowse link 4 158,085,059 158,219,525 RGD:11079207
Pulmonary Fibrosis and/or Bone Marrow Failure, Telomere-Related, 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rtel1 regulator of telomere elongation helicase 1 JBrowse link 3 176,818,012 176,856,531 RGD:8554872
G Tert telomerase reverse transcriptase JBrowse link 1 32,250,876 32,275,330 RGD:7240710
RGD:8554872
Pulmonary Fibrosis and/or Bone Marrow Failure, Telomere-Related, 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Terc telomerase RNA component JBrowse link 2 116,432,723 116,433,110 RGD:7240710
RGD:8554872
Pulmonary Fibrosis and/or Bone Marrow Failure, Telomere-Related, 3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rtel1 regulator of telomere elongation helicase 1 JBrowse link 3 176,818,012 176,856,531 RGD:7240710
RGD:8554872
Pulmonary Fibrosis and/or Bone Marrow Failure, Telomere-Related, 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Parn poly(A)-specific ribonuclease JBrowse link 10 1,309,724 1,461,123 RGD:8554872
RGD:7240710
pulmonary sarcoidosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abo ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase JBrowse link 3 4,374,679 4,394,374 RGD:5128833
G Ada adenosine deaminase JBrowse link 3 160,115,840 160,139,947 RGD:5128856
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:4891110
G C3 complement C3 JBrowse link 9 9,721,137 9,747,084 RGD:5129502
G Ccl19 C-C motif chemokine ligand 19 JBrowse link 5 58,181,025 58,182,969 RGD:5130912
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:4891436
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:4892099
RGD:4892066
G Ccr7 C-C motif chemokine receptor 7 JBrowse link 10 87,057,335 87,067,444 RGD:5130912
G Cftr cystic fibrosis transmembrane conductance regulator JBrowse link 4 42,693,263 42,860,679 RGD:4139905
G Chi3l1 chitinase 3 like 1 JBrowse link 13 51,022,844 51,030,797 RGD:4892634
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:5131289
G Cxcl10 C-X-C motif chemokine ligand 10 JBrowse link 14 17,210,733 17,212,930 RGD:5135438
RGD:5135492
G Cxcl11 C-X-C motif chemokine ligand 11 JBrowse link 14 17,195,395 17,198,170 RGD:5135438
G Cxcl6 C-X-C motif chemokine ligand 6 JBrowse link 14 18,860,201 18,920,839 RGD:5135244
G Cxcl9 C-X-C motif chemokine ligand 9 JBrowse link 14 17,228,832 17,233,743 RGD:5135438
G Cxcr3 C-X-C motif chemokine receptor 3 JBrowse link X 71,614,346 71,616,997 RGD:5135492
G Cyba cytochrome b-245 alpha chain JBrowse link 19 55,249,634 55,257,824 RGD:4780358
G Defb1 defensin beta 1 JBrowse link 16 75,294,385 75,309,127 RGD:4892262
G Defb4 defensin beta 4 JBrowse link 16 75,634,598 75,637,789 RGD:4892262
G Egr1 early growth response 1 JBrowse link 18 27,657,903 27,660,101 RGD:5131899
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:4145349
G Il15 interleukin 15 JBrowse link 19 23,542,606 23,624,366 RGD:4990461
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:4889863
RGD:4889823
G Il18r1 interleukin 18 receptor 1 JBrowse link 9 47,184,404 47,217,403 RGD:5024944
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:4143198
G Lta lymphotoxin alpha JBrowse link 20 4,851,889 4,854,677 RGD:4143248
G Muc1 mucin 1, cell surface associated JBrowse link 2 188,543,137 188,547,874 RGD:5131177
G Ngf nerve growth factor JBrowse link 2 204,886,158 204,939,523 RGD:4891110
RGD:5144061
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:4891449
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 JBrowse link 18 31,728,373 32,704,022 RGD:4892566
G Ntf3 neurotrophin 3 JBrowse link 4 158,636,883 158,705,886 RGD:4891110
RGD:5144061
G Ntrk1 neurotrophic receptor tyrosine kinase 1 JBrowse link 2 187,143,568 187,160,373 RGD:4891110
G Sftpa1 surfactant protein A1 JBrowse link 16 18,716,019 18,719,404 RGD:4143437
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:4145294
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:4145301
RGD:8553184
G Tnc tenascin C JBrowse link 5 79,789,686 79,874,555 RGD:4889595
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:4143236
RGD:4143466
G Tnfrsf1b TNF receptor superfamily member 1B JBrowse link 5 163,136,390 163,167,299 RGD:5131275
G Vip vasoactive intestinal peptide JBrowse link 1 42,169,307 42,177,582 RGD:5685623
Radiation Pneumonitis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alox5 arachidonate 5-lipoxygenase JBrowse link 4 148,398,004 148,446,308 RGD:4890434
G C3 complement C3 JBrowse link 9 9,721,137 9,747,084 RGD:5129484
G C4bpa complement component 4 binding protein, alpha JBrowse link 13 47,342,090 47,377,580 RGD:5129484
G Ccl17 C-C motif chemokine ligand 17 JBrowse link 19 10,619,220 10,620,671 RGD:4145517
G Ccl22 C-C motif chemokine ligand 22 JBrowse link 19 10,674,189 10,681,145 RGD:4145517
G Il13 interleukin 13 JBrowse link 10 38,982,909 38,985,466 RGD:5131286
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:5131286
G Mif macrophage migration inhibitory factor JBrowse link 20 13,715,219 13,732,980 RGD:5131286
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:5131286
G Sftpd surfactant protein D JBrowse link 16 18,753,535 18,766,100 RGD:4143486
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:4145121
RGD:4145278
RGD:4145136
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:5131286
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:5131153
G Vtn vitronectin JBrowse link 10 65,767,960 65,771,040 RGD:5129484
sick building syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pnpla6 patatin-like phospholipase domain containing 6 JBrowse link 12 2,068,749 2,098,139 RGD:11554173
silicosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahr aryl hydrocarbon receptor JBrowse link 6 54,963,990 55,001,806 RGD:11554173
G Arg1 arginase 1 JBrowse link 1 21,525,421 21,537,872 RGD:4143368
RGD:11554173
G Arpc2 actin related protein 2/3 complex, subunit 2 JBrowse link 9 81,518,163 81,548,871 RGD:4893904
G C3 complement C3 JBrowse link 9 9,721,137 9,747,084 RGD:5129516
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:11554173
G Ccl7 C-C motif chemokine ligand 7 JBrowse link 10 69,423,083 69,424,933 RGD:6483764
G Cd36 CD36 molecule JBrowse link 4 14,150,309 14,191,498 RGD:11041147
G Chia chitinase, acidic JBrowse link 2 208,750,348 208,797,388 RGD:4893904
G Cpm carboxypeptidase M JBrowse link 7 60,654,350 60,714,620 RGD:11554173
G Csf2 colony stimulating factor 2 JBrowse link 10 39,602,089 39,604,070 RGD:10450467
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 JBrowse link 9 67,699,397 67,706,068 RGD:4891515
G Egr1 early growth response 1 JBrowse link 18 27,657,903 27,660,101 RGD:5131937
G Eln elastin JBrowse link 12 24,978,478 25,021,864 RGD:9585691
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:4145384
G Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 JBrowse link 3 62,481,222 62,491,356 RGD:10059658
G Il17a interleukin 17A JBrowse link 9 26,841,299 26,844,786 RGD:4888525
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:11554173
G Il1rn interleukin 1 receptor antagonist JBrowse link 3 1,449,778 1,468,624 RGD:4142816
RGD:8551847
G Il2ra interleukin 2 receptor subunit alpha JBrowse link 17 70,500,672 70,547,929 RGD:4891500
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:11554173
G Mmp13 matrix metallopeptidase 13 JBrowse link 8 5,522,739 5,533,018 RGD:10043156
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:4891445
RGD:11554173
G Pdzrn4 PDZ domain containing RING finger 4 JBrowse link 7 133,856,101 134,004,250 RGD:11554173
G Prkcb protein kinase C, beta JBrowse link 1 192,233,569 192,575,339 RGD:1625527
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:4142816
RGD:10450591
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:5131150
Surfactant Dysfunction term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca3 ATP binding cassette subfamily A member 3 JBrowse link 10 13,723,365 13,780,558 RGD:8554872
G Sftpb surfactant protein B JBrowse link 4 100,166,855 100,175,941 RGD:8554872
Surfactant Metabolism Dysfunction, Pulmonary, 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca3 ATP binding cassette subfamily A member 3 JBrowse link 10 13,723,365 13,780,558 RGD:8554872
G Sftpb surfactant protein B JBrowse link 4 100,166,855 100,175,941 RGD:7240710
RGD:8554872
Surfactant Metabolism Dysfunction, Pulmonary, 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sftpc surfactant protein C JBrowse link 15 52,211,538 52,214,480 RGD:7240710
RGD:8554872
Surfactant Metabolism Dysfunction, Pulmonary, 3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca3 ATP binding cassette subfamily A member 3 JBrowse link 10 13,723,365 13,780,558 RGD:7240710
RGD:8554872
Surfactant Metabolism Dysfunction, Pulmonary, 5 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Csf2rb colony stimulating factor 2 receptor beta common subunit JBrowse link 7 119,554,383 119,568,248 RGD:7240710
RGD:8554872

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14875
    disease of anatomical entity 14051
      musculoskeletal system disease 3984
        connective tissue disease 2572
          interstitial lung disease 327
            AUTOIMMUNE INTERSTITIAL LUNG, JOINT, AND KIDNEY DISEASE 1
            Goodpasture syndrome + 55
            INTERSTITIAL LUNG AND LIVER DISEASE 3
            Interstitial Lung Disease, Nephrotic Syndrome, and Epidermolysis Bullosa, Congenital 1
            Langerhans-cell histiocytosis + 1
            Radiation Pneumonitis 15
            Surfactant Dysfunction 2
            Surfactant Metabolism Dysfunction, Pulmonary, 1 2
            Surfactant Metabolism Dysfunction, Pulmonary, 2 1
            Surfactant Metabolism Dysfunction, Pulmonary, 3 1
            Surfactant Metabolism Dysfunction, Pulmonary, 5 1
            bronchiolitis obliterans + 36
            desquamative interstitial pneumonia 1
            extrinsic allergic alveolitis + 29
            granulomatosis with polyangiitis + 11
            idiopathic interstitial pneumonia + 54
            lymphoid interstitial pneumonia 0
            pneumoconiosis + 70
            pulmonary fibrosis + 197
            pulmonary sarcoidosis 39
            rheumatoid arthritis interstitial lung disease 0
Path 2
Term Annotations click to browse term
  disease 14875
    disease of anatomical entity 14051
      respiratory system disease 2375
        lower respiratory tract disease 1412
          lung disease 1370
            interstitial lung disease 327
              AUTOIMMUNE INTERSTITIAL LUNG, JOINT, AND KIDNEY DISEASE 1
              Goodpasture syndrome + 55
              INTERSTITIAL LUNG AND LIVER DISEASE 3
              Interstitial Lung Disease, Nephrotic Syndrome, and Epidermolysis Bullosa, Congenital 1
              Langerhans-cell histiocytosis + 1
              Radiation Pneumonitis 15
              Surfactant Dysfunction 2
              Surfactant Metabolism Dysfunction, Pulmonary, 1 2
              Surfactant Metabolism Dysfunction, Pulmonary, 2 1
              Surfactant Metabolism Dysfunction, Pulmonary, 3 1
              Surfactant Metabolism Dysfunction, Pulmonary, 5 1
              bronchiolitis obliterans + 36
              desquamative interstitial pneumonia 1
              extrinsic allergic alveolitis + 29
              granulomatosis with polyangiitis + 11
              idiopathic interstitial pneumonia + 54
              lymphoid interstitial pneumonia 0
              pneumoconiosis + 70
              pulmonary fibrosis + 197
              pulmonary sarcoidosis 39
              rheumatoid arthritis interstitial lung disease 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.