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ONTOLOGY REPORT - ANNOTATIONS


Term:germ cell and embryonal cancer
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Accession:DOID:3095 term browser browse the term
Definition:A germ cell cancer that is derives_from a mixture of germs cells and embryonal cells. (DO)
Synonyms:exact_synonym: embryonal and mixed cancer;   embryonal cancer;   embryonal cancers
 primary_id: RDO:9003431
For additional species annotation, visit the Alliance of Genome Resources.


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Aplasia Cutis Congenita with Epibulbar Dermoids term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cluap1 clusterin associated protein 1 JBrowse link 10 11,847,058 11,878,792 RGD:8554872
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:8554872
RGD:7240710
G Nlrp5 NLR family, pyrin domain containing 5 JBrowse link 1 71,452,184 71,490,915 RGD:8554872
atypical teratoid rhabdoid tumor term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alk ALK receptor tyrosine kinase JBrowse link 6 22,696,415 23,203,791 RGD:8554872
G Atrx ATRX, chromatin remodeler JBrowse link X 76,820,110 76,979,155 RGD:8554872
G Derl3 derlin 3 JBrowse link 20 13,692,102 13,707,645 RGD:8554872
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 JBrowse link 20 13,679,955 13,702,821 RGD:7240710
RGD:8554872
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:8554872
choriocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fgf8 fibroblast growth factor 8 JBrowse link 1 265,492,949 265,498,965 RGD:2289339
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:2290454
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:2290454
G Pdgfb platelet derived growth factor subunit B JBrowse link 7 121,215,458 121,233,092 RGD:2292200
G Pdgfrb platelet derived growth factor receptor beta JBrowse link 18 56,364,586 56,406,381 RGD:2292200
G Timp3 TIMP metallopeptidase inhibitor 3 JBrowse link 7 23,543,125 23,594,170 RGD:2290418
dermoid cyst of ovary term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxo3 forkhead box O3 JBrowse link 20 46,428,078 46,519,156 RGD:13592920
endodermal sinus tumor term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afp alpha-fetoprotein JBrowse link 14 19,141,755 19,159,919 RGD:2292040
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:2298800
G Fgf8 fibroblast growth factor 8 JBrowse link 1 265,492,949 265,498,965 RGD:2289339
G Sall4 spalt-like transcription factor 4 JBrowse link 3 165,520,155 165,538,176 RGD:11557983
G Wnt2b Wnt family member 2B JBrowse link 2 207,433,771 207,457,094 RGD:2298800
gestational trophoblastic neoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ncr1 natural cytotoxicity triggering receptor 1 JBrowse link 1 73,178,917 73,226,504 RGD:8554872
G Pou5f1 POU class 5 homeobox 1 JBrowse link 20 3,747,231 3,751,994 RGD:11554173
Hydatidiform Mole term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cga glycoprotein hormones, alpha polypeptide JBrowse link 5 50,362,491 50,393,368 RGD:2293636
G Khdc3 KH domain containing 3, subcortical maternal complex member JBrowse link 8 79,781,941 79,783,845 RGD:11554173
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:2293517
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:2290363
G Msh2 mutS homolog 2 JBrowse link 6 11,215,951 11,274,916 RGD:2293517
G Ncr1 natural cytotoxicity triggering receptor 1 JBrowse link 1 73,178,917 73,226,504 RGD:8554872
G Pdgfrb platelet derived growth factor receptor beta JBrowse link 18 56,364,586 56,406,381 RGD:2292200
Hydatidiform Mole, Invasive term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Msh2 mutS homolog 2 JBrowse link 6 11,215,951 11,274,916 RGD:2293517
Hydatidiform Mole, Recurrent, 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Khdc3 KH domain containing 3, subcortical maternal complex member JBrowse link 8 79,781,941 79,783,845 RGD:7240710
RGD:8554872
Hydatidiform Mole, Recurrent, 3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mei1 meiotic double-stranded break formation protein 1 JBrowse link 7 123,308,041 123,361,391 RGD:7240710
RGD:8554872
Hydatidiform Mole, Recurrent, 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RGD1563323 similar to hypothetical protein FLJ22531 JBrowse link 1 219,864,108 219,952,143 RGD:7240710
RGD:8554872
Ring Dermoid of Cornea term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pitx2 paired-like homeodomain 2 JBrowse link 2 233,602,732 233,621,059 RGD:7240710
RGD:8554872
teratocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afp alpha-fetoprotein JBrowse link 14 19,141,755 19,159,919 RGD:2292041
G H19 H19, imprinted maternally expressed transcript (non-protein coding) JBrowse link 1 215,744,404 215,747,080 RGD:2306169
teratoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:2296025
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:2298800
G H19 H19, imprinted maternally expressed transcript (non-protein coding) JBrowse link 1 215,744,404 215,747,080 RGD:2306183
G Nanog Nanog homeobox JBrowse link 4 155,531,906 155,539,268 RGD:9681441
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 JBrowse link 10 81,657,152 81,666,542 RGD:2299072
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 JBrowse link 10 81,648,216 81,653,717 RGD:2299072
G Pgm1 phosphoglucomutase 1 JBrowse link 5 118,743,632 118,803,055 RGD:2299871
G Pgm3 phosphoglucomutase 3 JBrowse link 8 94,225,513 94,243,230 RGD:2299871
G Tdgf1 teratocarcinoma-derived growth factor 1 JBrowse link 8 119,215,266 119,220,909 RGD:11561895
G Tert telomerase reverse transcriptase JBrowse link 1 32,250,876 32,275,330 RGD:2298558
G Tymp thymidine phosphorylase JBrowse link 7 130,342,481 130,347,845 RGD:2293724
G Wnt2b Wnt family member 2B JBrowse link 2 207,433,771 207,457,094 RGD:2298800
trophoblastic neoplasm term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ang angiogenin JBrowse link 15 28,022,926 28,028,636 RGD:2325706
G Kiss1 KiSS-1 metastasis-suppressor JBrowse link 13 50,529,506 50,537,603 RGD:2292132

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15603
    disease of cellular proliferation 5804
      Neoplasms by Histologic Type 3586
        Germ Cell and Embryonal Neoplasms 1693
          germ cell and embryonal cancer 41
            central nervous system teratoma + 0
            endodermal sinus tumor + 5
            teratocarcinoma 2
            teratoma + 22
            trophoblastic neoplasm + 17
Path 2
Term Annotations click to browse term
  disease 15603
    disease of cellular proliferation 5804
      cancer 4121
        cell type cancer 2927
          sarcoma 227
            germ cell and embryonal cancer 41
              central nervous system teratoma + 0
              endodermal sinus tumor + 5
              teratocarcinoma 2
              teratoma + 22
              trophoblastic neoplasm + 17
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.