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ONTOLOGY REPORT - ANNOTATIONS


Term:embryonal carcinoma
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Accession:DOID:3308 term browser browse the term
Definition:A highly malignant, primitive form of carcinoma, probably of germinal cell or teratomatous derivation, usually arising in a gonad and rarely in other sites. It is rare in the female ovary, but in the male it accounts for 20% of all testicular tumors. (From Dorland, 27th ed & Holland et al., Cancer Medicine, 3d ed, p1595)
Synonyms:exact_synonym: Embryonal Carcinomas;   primary extragonadal embryonal carcinoma
 primary_id: MESH:D018236
 alt_id: RDO:0007130
 xref: GARD:5140;   NCI:C3752;   NCI:C8880
For additional species annotation, visit the Alliance of Genome Resources.


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embryonal carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afp alpha-fetoprotein JBrowse link 14 19,141,755 19,159,919 RGD:2292041
G Ccna2 cyclin A2 JBrowse link 2 123,274,727 123,282,266 RGD:2293346
G Chek2 checkpoint kinase 2 JBrowse link 12 51,845,574 51,878,098 RGD:2298484
G Fgf8 fibroblast growth factor 8 JBrowse link 1 265,492,949 265,498,965 RGD:2289339
G Inha inhibin subunit alpha JBrowse link 9 82,700,482 82,703,383 RGD:2290380
G Pou5f1 POU class 5 homeobox 1 JBrowse link 20 3,747,231 3,751,994 RGD:2292433
RGD:2292431
G Rb1 RB transcriptional corepressor 1 JBrowse link 15 55,081,582 55,209,060 RGD:2299891
embryonal rhabdomyosarcoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arid1a AT-rich interaction domain 1A JBrowse link 5 151,904,687 151,977,973 RGD:11554173
G Bcor BCL6 co-repressor JBrowse link X 11,570,155 11,692,022 RGD:11554173
G Bub1b BUB1 mitotic checkpoint serine/threonine kinase B JBrowse link 3 110,367,949 110,420,471 RGD:11554173
G Dmd dystrophin JBrowse link X 51,149,358 53,519,271 RGD:11554173
G Msh2 mutS homolog 2 JBrowse link 6 11,215,951 11,274,916 RGD:8554872
G Myod1 myogenic differentiation 1 JBrowse link 1 102,396,538 102,399,248 RGD:11554173
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 JBrowse link 12 40,895,515 40,955,999 RGD:8554872
G Setd2 SET domain containing 2, histone lysine methyltransferase JBrowse link 8 118,802,478 118,888,224 RGD:11554173
G Slc22a18 solute carrier family 22, member 18 JBrowse link 1 216,676,330 216,700,632 RGD:13592920
G Stk11 serine/threonine kinase 11 JBrowse link 7 12,440,751 12,457,513 RGD:8554872

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15626
    disease of cellular proliferation 5797
      cancer 4113
        cell type cancer 2921
          carcinoma 1890
            embryonal carcinoma 17
              central nervous system embryonal carcinoma 0
              embryonal rhabdomyosarcoma + 10
              embryonal testis carcinoma + 0
              ovarian embryonal carcinoma + 0
Path 2
Term Annotations click to browse term
  disease 15626
    disease of cellular proliferation 5797
      Neoplasms by Histologic Type 3580
        cell type cancer 2921
          germ cell cancer 93
            embryonal cancer 17
              embryonal carcinoma 17
                central nervous system embryonal carcinoma 0
                embryonal rhabdomyosarcoma + 10
                embryonal testis carcinoma + 0
                ovarian embryonal carcinoma + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.