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ONTOLOGY REPORT - ANNOTATIONS


Term:breast carcinoma
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Accession:DOID:3459 term browser browse the term
Definition:A breast cancer that has_material_basis_in abnormally proliferating cells derives_from epithelial cells. (DO)
Synonyms:exact_synonym: Mammary carcinoma;   breast carcinomas;   carcinoma of breast;   human mammary carcinoma;   human mammary carcinomas
 primary_id: RDO:9001794
 xref: NCI:C4872
For additional species annotation, visit the Alliance of Genome Resources.


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breast carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abce1 ATP binding cassette subfamily E member 1 JBrowse link 19 31,867,960 31,892,863 RGD:11041882
G Abcg2 ATP binding cassette subfamily G member 2 JBrowse link 4 88,765,441 88,890,268 RGD:2315568
G Afdn afadin, adherens junction formation factor JBrowse link 1 53,713,873 53,861,918 RGD:13838725
G Amacr alpha-methylacyl-CoA racemase JBrowse link 2 60,949,276 60,961,342 RGD:2315635
G Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 JBrowse link 15 27,849,943 27,852,083 RGD:2315667
G Atm ATM serine/threonine kinase JBrowse link 8 58,015,938 58,119,973 RGD:1643351
RGD:8554872
G Atp7b ATPase copper transporting beta JBrowse link 16 74,865,516 74,944,935 RGD:2292670
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:1643480
G Bcl2l10 BCL2 like 10 JBrowse link 8 82,288,705 82,294,750 RGD:14392810
G Bin1 bridging integrator 1 JBrowse link 18 25,163,575 25,222,139 RGD:1580043
G Brca1 BRCA1, DNA repair associated JBrowse link 10 89,394,821 89,455,093 RGD:2293150
RGD:8554872
G Brca2 BRCA2, DNA repair associated JBrowse link 12 503,660 544,754 RGD:8554872
G Brip1 BRCA1 interacting protein C-terminal helicase 1 JBrowse link 10 73,507,009 73,632,742 RGD:11251773
RGD:8554872
G Ca9 carbonic anhydrase 9 JBrowse link 5 59,008,277 59,015,535 RGD:2293195
G Cadm1 cell adhesion molecule 1 JBrowse link 8 51,858,906 52,200,591 RGD:2289088
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:2293309
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:2289101
RGD:8661775
G Cbx7 chromobox 7 JBrowse link 7 121,136,067 121,153,503 RGD:11352698
G Cd46 CD46 molecule JBrowse link 13 113,786,525 113,818,741 RGD:2293551
RGD:2293547
G Cd59 CD59 molecule JBrowse link 3 94,010,481 94,028,660 RGD:2326192
G Cd82 Cd82 molecule JBrowse link 3 82,324,344 82,368,846 RGD:2289398
G Cd9 CD9 molecule JBrowse link 4 157,977,163 158,010,091 RGD:2326200
G Cdc25a cell division cycle 25A JBrowse link 8 117,953,223 117,971,552 RGD:2734052
G Cdc25b cell division cycle 25B JBrowse link 3 123,731,539 123,741,696 RGD:4105449
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:8554872
G Cdh13 cadherin 13 JBrowse link 19 50,848,793 51,971,618 RGD:2293545
G Cdk4 cyclin-dependent kinase 4 JBrowse link 7 70,345,971 70,352,689 RGD:2293583
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:9585643
G Cxcl12 C-X-C motif chemokine ligand 12 JBrowse link 4 149,261,044 149,273,891 RGD:2317609
G Dcn decorin JBrowse link 7 38,742,250 38,782,282 RGD:2311418
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:2293732
RGD:2293728
G Eno2 enolase 2 JBrowse link 4 157,285,192 157,294,090 RGD:2293740
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:2289908
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:2290017
RGD:8552986
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:2290130
G Fgf2 fibroblast growth factor 2 JBrowse link 2 124,081,072 124,134,133 RGD:8655550
G Fzd1 frizzled class receptor 1 JBrowse link 4 26,470,864 26,475,262 RGD:2298699
G Fzd2 frizzled class receptor 2 JBrowse link 10 90,550,147 90,552,057 RGD:2298699
G Hdac1 histone deacetylase 1 JBrowse link 5 147,716,664 147,743,723 RGD:2306216
G Igf2r insulin-like growth factor 2 receptor JBrowse link 1 48,176,095 48,264,482 RGD:14985218
G Kdm6b lysine demethylase 6B JBrowse link 10 56,000,494 56,009,582 RGD:9587818
G Kdr kinase insert domain receptor JBrowse link 14 34,727,677 34,787,127 RGD:2291952
RGD:2291950
G Klk6 kallikrein related-peptidase 6 JBrowse link 1 99,762,195 99,769,486 RGD:2314863
G Mdc1 mediator of DNA damage checkpoint 1 JBrowse link 20 3,405,017 3,419,831 RGD:9589053
G Mlh3 mutL homolog 3 JBrowse link 6 109,059,386 109,095,876 RGD:8554872
G Mmp14 matrix metallopeptidase 14 JBrowse link 15 33,074,441 33,083,666 RGD:2314951
G Mre11 MRE11 homolog, double strand break repair nuclease JBrowse link 8 13,304,355 13,350,329 RGD:2300250
RGD:2317721
G Msh2 mutS homolog 2 JBrowse link 6 11,215,951 11,274,916 RGD:2293524
RGD:2293507
RGD:2293505
G Mtus1 microtubule associated scaffold protein 1 JBrowse link 16 54,240,892 54,386,131 RGD:2317017
G Ncoa1 nuclear receptor coactivator 1 JBrowse link 6 28,677,563 28,931,844 RGD:2293529
G Ncoa3 nuclear receptor coactivator 3 JBrowse link 3 162,692,176 162,788,582 RGD:2289908
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 JBrowse link 10 81,657,152 81,666,542 RGD:2299061
G Nqo2 N-ribosyldihydronicotinamide:quinone reductase 2 JBrowse link 17 32,131,847 32,158,559 RGD:11073689
G Palb2 partner and localizer of BRCA2 JBrowse link 1 192,064,586 192,088,547 RGD:8554872
G Parl presenilin associated, rhomboid-like JBrowse link 11 84,517,368 84,544,463 RGD:12902629
G Pdgfra platelet derived growth factor receptor alpha JBrowse link 14 35,527,926 35,581,130 RGD:2292178
G Pdgfrb platelet derived growth factor receptor beta JBrowse link 18 56,364,586 56,406,381 RGD:2292178
G Plcg1 phospholipase C, gamma 1 JBrowse link 3 156,727,642 156,758,307 RGD:2299875
G Plk1 polo-like kinase 1 JBrowse link 1 192,115,990 192,125,969 RGD:2299942
G Plk3 polo-like kinase 3 JBrowse link 5 135,997,725 136,002,900 RGD:2299942
G Prc1 protein regulator of cytokinesis 1 JBrowse link 1 142,087,181 142,108,746 RGD:8554872
G Prss8 serine protease 8 JBrowse link 1 199,372,519 199,377,035 RGD:2292485
G Psmb9 proteasome 20S subunit beta 9 JBrowse link 20 3,973,424 3,978,845 RGD:9854639
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:2298868
G Rrm2 ribonucleotide reductase regulatory subunit M2 JBrowse link 6 43,884,627 43,890,818 RGD:5133696
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:2306233
G Smad2 SMAD family member 2 JBrowse link 18 72,550,107 72,612,078 RGD:2300007
G Snw1 SNW domain containing 1 JBrowse link 6 111,483,698 111,507,782 RGD:11035252
G Srd5a1 steroid 5 alpha-reductase 1 JBrowse link 1 36,320,504 36,354,694 RGD:2302558
G Srd5a2 steroid 5 alpha-reductase 2 JBrowse link 6 25,279,635 25,315,501 RGD:2302558
G Stat1 signal transducer and activator of transcription 1 JBrowse link 9 54,287,540 54,327,958 RGD:2291894
G Stk11 serine/threonine kinase 11 JBrowse link 7 12,440,751 12,457,513 RGD:2291945
RGD:8554872
G Terc telomerase RNA component JBrowse link 2 116,432,723 116,433,110 RGD:2291965
RGD:2291971
G Tfrc transferrin receptor JBrowse link 11 71,397,423 71,419,263 RGD:2292020
G Thoc5 THO complex 5 JBrowse link 14 85,138,219 85,171,729 RGD:2317225
G Thrb thyroid hormone receptor beta JBrowse link 15 8,890,578 9,239,815 RGD:2315100
G Timp3 TIMP metallopeptidase inhibitor 3 JBrowse link 7 23,543,125 23,594,170 RGD:2290409
RGD:2290413
G Tsg101 tumor susceptibility 101 JBrowse link 1 102,941,151 102,971,017 RGD:1600429
G Vegfc vascular endothelial growth factor C JBrowse link 16 40,440,371 40,555,178 RGD:2315477
G Wnt2 Wnt family member 2 JBrowse link 4 45,286,845 45,332,899 RGD:2291879
G Zfhx3 zinc finger homeobox 3 JBrowse link 19 42,753,983 42,925,794 RGD:2315696
bilateral breast cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atm ATM serine/threonine kinase JBrowse link 8 58,015,938 58,119,973 RGD:8554872
breast adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:8554872
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:9226881
G Ccne1 cyclin E1 JBrowse link 1 94,485,830 94,495,112 RGD:2289225
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 JBrowse link 6 2,308,179 2,316,739 RGD:7829735
G Fgfr3 fibroblast growth factor receptor 3 JBrowse link 14 82,272,322 82,287,739 RGD:2289868
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:8554872
G Muc1 mucin 1, cell surface associated JBrowse link 2 188,543,137 188,547,874 RGD:2324855
G Mxi1 MAX interactor 1, dimerization protein JBrowse link 1 274,030,748 274,090,071 RGD:1298988
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:8554872
G Rb1cc1 RB1-inducible coiled-coil 1 JBrowse link 5 13,033,918 13,097,369 RGD:8554872
G Slc22a18 solute carrier family 22, member 18 JBrowse link 1 216,676,330 216,700,632 RGD:8554872
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:14995452
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:8554872
breast carcinoma in situ term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Igf2r insulin-like growth factor 2 receptor JBrowse link 1 48,176,095 48,264,482 RGD:2311631
breast ductal carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc9 ATP binding cassette subfamily C member 9 JBrowse link 4 176,806,098 176,928,540 RGD:8554872
G Alox5 arachidonate 5-lipoxygenase JBrowse link 4 148,398,004 148,446,308 RGD:8554872
G Amfr autocrine motility factor receptor JBrowse link 19 11,473,538 11,509,500 RGD:8554872
G Bcar1 BCAR1 scaffold protein, Cas family member JBrowse link 19 43,932,543 43,967,452 RGD:1579979
G Brca1 BRCA1, DNA repair associated JBrowse link 10 89,394,821 89,455,093 RGD:8554872
G Brca2 BRCA2, DNA repair associated JBrowse link 12 503,660 544,754 RGD:8554872
G Bsg basigin (Ok blood group) JBrowse link 7 12,875,536 12,882,753 RGD:2289059
G Cacna1c calcium voltage-gated channel subunit alpha1 C JBrowse link 4 150,635,808 151,270,790 RGD:8554872
G Cacna1h calcium voltage-gated channel subunit alpha1 H JBrowse link 10 14,730,932 14,789,201 RGD:8554872
G Ccdc180 coiled-coil domain containing 180 JBrowse link 5 61,467,799 61,542,675 RGD:8554872
G Ccdc71l coiled-coil domain containing 71-like JBrowse link 6 51,659,498 51,666,145 RGD:8554872
G Cd44 CD44 molecule (Indian blood group) JBrowse link 3 92,695,083 92,783,820 RGD:2289356
G Cnnm1 cyclin and CBS domain divalent metal cation transport mediator 1 JBrowse link 1 263,184,361 263,243,912 RGD:8554872
G Coro6 coronin 6 JBrowse link 10 62,691,952 62,700,658 RGD:8554872
G Cpxm2 carboxypeptidase X (M14 family), member 2 JBrowse link 1 204,048,785 204,161,090 RGD:8554872
G Creb3 cAMP responsive element binding protein 3 JBrowse link 5 59,063,532 59,068,196 RGD:8554872
G Ebag9 estrogen receptor binding site associated, antigen, 9 JBrowse link 7 83,564,563 83,582,516 RGD:2298489
G Fubp1 far upstream element binding protein 1 JBrowse link 2 257,425,676 257,452,745 RGD:8554872
G Htra2 HtrA serine peptidase 2 JBrowse link 4 113,883,671 113,886,833 RGD:8554872
G Kndc1 kinase non-catalytic C-lobe domain containing 1 JBrowse link 1 212,229,751 212,279,254 RGD:8554872
G Lrat lecithin retinol acyltransferase JBrowse link 2 181,896,304 181,905,366 RGD:8554872
G Mical2 microtubule associated monooxygenase, calponin and LIM domain containing 2 JBrowse link 1 177,048,607 177,173,729 RGD:8554872
G Mug2 murinoglobulin 2 JBrowse link 4 154,215,262 154,282,608 RGD:8554872
G Notch3 notch receptor 3 JBrowse link 7 14,138,495 14,189,688 RGD:8554872
G Nts neurotensin JBrowse link 7 44,111,594 44,120,998 RGD:8554872
G Phf24 PHD finger protein 24 JBrowse link 5 58,359,744 58,387,446 RGD:8554872
G Pml promyelocytic leukemia JBrowse link 8 63,002,515 63,034,310 RGD:8554872
G Rad54l RAD54 like JBrowse link 5 134,948,511 134,978,125 RGD:8554872
G Rnf212 ring finger protein 212 JBrowse link 14 1,959,148 1,998,077 RGD:8554872
G Rp1 RP1, axonemal microtubule associated JBrowse link 5 15,005,028 15,060,508 RGD:8554872
G Rrp1 ribosomal RNA processing 1 JBrowse link 20 10,982,016 10,993,260 RGD:8554872
G Slitrk6 SLIT and NTRK-like family, member 6 JBrowse link 15 95,507,632 95,514,259 RGD:8554872
G Spen spen family transcriptional repressor JBrowse link 5 160,015,573 160,070,915 RGD:8554872
G Syt6 synaptotagmin 6 JBrowse link 2 206,064,181 206,119,034 RGD:8554872
G Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b JBrowse link 15 51,433,853 51,464,215 RGD:2290492
G Tp73 tumor protein p73 JBrowse link 5 171,355,876 171,415,354 RGD:2290492
G Tspan8 tetraspanin 8 JBrowse link 7 58,814,805 58,847,564 RGD:8554872
G Tspear thrombospondin-type laminin G domain and EAR repeats JBrowse link 20 11,501,510 11,529,210 RGD:8554872
G Xiap X-linked inhibitor of apoptosis JBrowse link X 128,409,425 128,455,786 RGD:2315853
G Yeats2 YEATS domain containing 2 JBrowse link 11 84,330,064 84,595,296 RGD:8554872
G Zdbf2 zinc finger, DBF-type containing 2 JBrowse link 9 70,052,088 70,090,847 RGD:8554872
G Zfp420 zinc finger protein 420 JBrowse link 1 88,531,975 88,564,480 RGD:8554872
G Zfp473 zinc finger protein 473 JBrowse link 1 100,736,319 100,755,498 RGD:8554872
breast metaplastic carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccn6 cellular communication network factor 6 JBrowse link 20 44,237,491 44,255,064 RGD:13592920
ductal carcinoma in situ term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akr1c3 aldo-keto reductase family 1, member C3 JBrowse link 17 69,761,126 69,778,021 RGD:10053629
G Ang angiogenin JBrowse link 15 28,022,926 28,028,636 RGD:2325702
G Anxa1 annexin A1 JBrowse link 1 237,893,983 237,910,002 RGD:7421537
G Ar androgen receptor JBrowse link X 67,656,253 67,828,998 RGD:1643341
G Areg amphiregulin JBrowse link 14 18,521,921 18,531,179 RGD:2292664
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:2289659
G Birc5 baculoviral IAP repeat-containing 5 JBrowse link 10 106,856,097 106,864,419 RGD:2293106
G Bnip3 BCL2 interacting protein 3 JBrowse link 1 211,248,098 211,265,282 RGD:7483575
G Brca2 BRCA2, DNA repair associated JBrowse link 12 503,660 544,754 RGD:2289048
G Ca9 carbonic anhydrase 9 JBrowse link 5 59,008,277 59,015,535 RGD:11554173
G Casp6 caspase 6 JBrowse link 2 235,341,326 235,353,715 RGD:2301339
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:2289132
G Ccnd2 cyclin D2 JBrowse link 4 159,674,885 159,697,207 RGD:2289156
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:2289659
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link 10 86,367,596 86,391,728 RGD:2289981
RGD:2289931
G Erbb3 erb-b2 receptor tyrosine kinase 3 JBrowse link 7 2,989,202 3,010,610 RGD:2289952
G Erbb4 erb-b2 receptor tyrosine kinase 4 JBrowse link 9 75,021,790 76,178,936 RGD:2289981
G Flt1 FMS-related tyrosine kinase 1 JBrowse link 12 9,033,993 9,205,886 RGD:2289965
G Fosl1 FOS like 1, AP-1 transcription factor subunit JBrowse link 1 220,826,560 220,835,066 RGD:2293756
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:2306227
RGD:11554173
G Hoxb13 homeo box B13 JBrowse link 10 84,031,955 84,034,228 RGD:2314726
G Klk10 kallikrein related-peptidase 10 JBrowse link 1 99,718,275 99,722,743 RGD:2314849
G Ldhb lactate dehydrogenase B JBrowse link 4 176,701,980 176,719,999 RGD:11554173
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:2290392
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:2290436
G Notch4 notch receptor 4 JBrowse link 20 4,329,794 4,353,868 RGD:2299156
G Pak2 p21 (RAC1) activated kinase 2 JBrowse link 11 72,829,407 72,865,815 RGD:7775026
G Pgr progesterone receptor JBrowse link 8 7,128,656 7,187,796 RGD:2289659
G Prkca protein kinase C, alpha JBrowse link 10 96,186,509 96,585,168 RGD:2292458
G Ptges prostaglandin E synthase JBrowse link 3 9,727,408 9,738,752 RGD:2300083
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:2300203
RGD:2300199
G Ptk2 protein tyrosine kinase 2 JBrowse link 7 114,436,419 114,611,317 RGD:2292561
G Rb1 RB transcriptional corepressor 1 JBrowse link 15 55,081,582 55,209,060 RGD:2299890
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link 1 220,992,770 221,003,249 RGD:2298754
G Slc2a1 solute carrier family 2 member 1 JBrowse link 5 138,154,677 138,182,897 RGD:11554173
G Socs1 suppressor of cytokine signaling 1 JBrowse link 10 4,956,795 4,958,472 RGD:2298909
G Socs2 suppressor of cytokine signaling 2 JBrowse link 7 36,495,496 36,500,878 RGD:2298909
G Socs3 suppressor of cytokine signaling 3 JBrowse link 10 106,973,863 106,976,969 RGD:2298909
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:2315078
G St14 suppression of tumorigenicity 14 JBrowse link 8 32,240,113 32,280,813 RGD:2315089
G Stat5a signal transducer and activator of transcription 5A JBrowse link 10 88,764,732 88,789,060 RGD:2291932
RGD:11554173
RGD:2291930
G Tert telomerase reverse transcriptase JBrowse link 1 32,250,876 32,275,330 RGD:2291992
G Tff1 trefoil factor 1 JBrowse link 20 9,892,124 9,895,984 RGD:2292005
G Timp2 TIMP metallopeptidase inhibitor 2 JBrowse link 10 107,338,465 107,386,072 RGD:2290436
G Timp4 TIMP metallopeptidase inhibitor 4 JBrowse link 4 147,156,948 147,163,467 RGD:2290436
G Top2a DNA topoisomerase II alpha JBrowse link 10 86,901,467 86,930,947 RGD:2315133
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:2289931
G Tymp thymidine phosphorylase JBrowse link 7 130,342,481 130,347,845 RGD:2293726
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:2315458
Ehrlich tumor carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cd40 CD40 molecule JBrowse link 3 161,519,789 161,534,943 RGD:11352683
G Cd40lg CD40 ligand JBrowse link X 159,703,703 159,714,886 RGD:11352683
invasive ductal carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb1a ATP binding cassette subfamily B member 1A JBrowse link 4 22,339,829 22,517,642 RGD:2315549
G Adgrb1 adhesion G protein-coupled receptor B1 JBrowse link 7 115,766,484 115,828,514 RGD:13831358
G Ager advanced glycosylation end product-specific receptor JBrowse link 20 4,363,152 4,366,079 RGD:8695990
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:13209138
G Anxa1 annexin A1 JBrowse link 1 237,893,983 237,910,002 RGD:7421535
RGD:7421560
G Anxa2 annexin A2 JBrowse link 8 75,687,134 75,723,589 RGD:7421560
G Ar androgen receptor JBrowse link X 67,656,253 67,828,998 RGD:1643344
G Areg amphiregulin JBrowse link 14 18,521,921 18,531,179 RGD:2292660
G Arpc2 actin related protein 2/3 complex, subunit 2 JBrowse link 9 81,518,163 81,548,871 RGD:11049179
G Atf4 activating transcription factor 4 JBrowse link 7 121,480,723 121,482,781 RGD:11554173
G Aurka aurora kinase A JBrowse link 3 170,364,177 170,380,278 RGD:1643348
G Bag1 Bcl2 associated athanogene 1 JBrowse link 5 57,254,421 57,267,002 RGD:11554173
G Brca1 BRCA1, DNA repair associated JBrowse link 10 89,394,821 89,455,093 RGD:8554872
G Brca2 BRCA2, DNA repair associated JBrowse link 12 503,660 544,754 RGD:8554872
G Brms1 BRMS1, transcriptional repressor and anoikis regulator JBrowse link 1 220,325,352 220,334,616 RGD:2289400
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:8661779
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:4891911
G Ccnd3 cyclin D3 JBrowse link 9 15,404,816 15,410,905 RGD:2316016
G Cd44 CD44 molecule (Indian blood group) JBrowse link 3 92,695,083 92,783,820 RGD:2289352
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:11554173
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:2289677
G Cdkn2a_v1 cyclin-dependent kinase inhibitor 2A, variant 1 RGD:2289677
G Cdkn2a_v2 cyclin-dependent kinase inhibitor 2A, variant 2 RGD:2289677
G Cldn4 claudin 4 JBrowse link 12 24,761,210 24,763,008 RGD:11554173
G Clu clusterin JBrowse link 15 42,626,612 42,665,858 RGD:8699513
G Crkl CRK like proto-oncogene, adaptor protein JBrowse link 11 87,338,606 87,356,644 RGD:7488897
G Csnk1e casein kinase 1, epsilon JBrowse link 7 120,651,976 120,675,559 RGD:2306813
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link 11 72,164,566 72,378,895 RGD:2306813
G Ebag9 estrogen receptor binding site associated, antigen, 9 JBrowse link 7 83,564,563 83,582,516 RGD:2289858
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link 10 86,367,596 86,391,728 RGD:11554173
G Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit JBrowse link 4 77,284,404 77,347,011 RGD:9588325
G Fgd1 FYVE, RhoGEF and PH domain containing 1 JBrowse link X 20,100,942 20,143,871 RGD:11554027
G Fhit fragile histidine triad diadenosine triphosphatase JBrowse link 15 15,697,292 16,862,873 RGD:2289894
G Foxc1 forkhead box C1 JBrowse link 17 33,947,501 33,951,484 RGD:8662363
G Hif1a hypoxia inducible factor 1 subunit alpha JBrowse link 6 96,810,868 96,856,303 RGD:2306227
G Hoxb7 homeo box B7 JBrowse link 10 84,135,224 84,138,642 RGD:10402178
G Hsd17b1 hydroxysteroid (17-beta) dehydrogenase 1 JBrowse link 10 88,987,558 88,989,758 RGD:4890946
G Il13 interleukin 13 JBrowse link 10 38,982,909 38,985,466 RGD:8549515
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:8655888
G Inha inhibin subunit alpha JBrowse link 9 82,700,482 82,703,383 RGD:2290390
G Jup junction plakoglobin JBrowse link 10 88,280,517 88,307,451 RGD:2291882
G Kiss1 KiSS-1 metastasis-suppressor JBrowse link 13 50,529,506 50,537,603 RGD:2289400
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:2292426
G Map2k4 mitogen activated protein kinase kinase 4 JBrowse link 10 52,196,121 52,301,887 RGD:2289400
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link 4 44,747,467 44,854,628 RGD:2317607
G Mmp13 matrix metallopeptidase 13 JBrowse link 8 5,522,739 5,533,018 RGD:2293606
G Ncoa4 nuclear receptor coactivator 4 JBrowse link 16 8,302,950 8,323,294 RGD:2293536
G Nefl neurofilament light JBrowse link 15 44,799,378 44,803,251 RGD:2298999
G Pcna proliferating cell nuclear antigen JBrowse link 3 124,880,698 124,884,570 RGD:2315014
G Prkci protein kinase C, iota JBrowse link 2 115,941,998 116,002,550 RGD:2314932
G Ptger1 prostaglandin E receptor 1 JBrowse link 19 24,799,422 24,803,373 RGD:11554173
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:11554173
G Rad50 RAD50 double strand break repair protein JBrowse link 10 39,002,130 39,054,042 RGD:2300250
G Rad54l RAD54 like JBrowse link 5 134,948,511 134,978,125 RGD:8554872
G Runx3 RUNX family transcription factor 3 JBrowse link 5 153,507,093 153,531,137 RGD:2302557
G Serpinb5 serpin family B member 5 JBrowse link 13 26,903,052 26,923,250 RGD:11554173
G Slc9a3r1 SLC9A3 regulator 1 JBrowse link 10 103,713,045 103,730,145 RGD:11554173
G Smad4 SMAD family member 4 JBrowse link 18 69,626,682 69,657,373 RGD:11554173
G Socs1 suppressor of cytokine signaling 1 JBrowse link 10 4,956,795 4,958,472 RGD:2298909
G Socs2 suppressor of cytokine signaling 2 JBrowse link 7 36,495,496 36,500,878 RGD:2298909
G Socs3 suppressor of cytokine signaling 3 JBrowse link 10 106,973,863 106,976,969 RGD:2298909
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:11554173
G Tmbim6 transmembrane BAX inhibitor motif containing 6 JBrowse link 7 141,039,433 141,070,269 RGD:2291958
G Vegfc vascular endothelial growth factor C JBrowse link 16 40,440,371 40,555,178 RGD:2315471
G Wif1 Wnt inhibitory factor 1 JBrowse link 7 63,094,955 63,165,158 RGD:727214
G Xrcc1 X-ray repair cross complementing 1 JBrowse link 1 81,412,635 81,441,680 RGD:2302569
invasive lobular carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agtr1a angiotensin II receptor, type 1a JBrowse link 17 35,907,102 35,958,136 RGD:11554173
G Agtr2 angiotensin II receptor, type 2 JBrowse link X 119,389,480 119,393,845 RGD:11554173
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:2289133
RGD:11353788
G Ccnd2 cyclin D2 JBrowse link 4 159,674,885 159,697,207 RGD:2289156
G Cd44 CD44 molecule (Indian blood group) JBrowse link 3 92,695,083 92,783,820 RGD:2289362
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:2289492
RGD:11554173
RGD:2289450
G Ctnna1 catenin alpha 1 JBrowse link 18 27,923,229 28,055,972 RGD:2289795
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:2289814
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link 10 86,367,596 86,391,728 RGD:2289935
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:2290134
G Myh9 myosin, heavy chain 9 JBrowse link 7 118,740,005 118,792,507 RGD:11554173
G Ppp1r12b protein phosphatase 1, regulatory subunit 12B JBrowse link 13 51,583,603 51,784,641 RGD:11554173
G Stat5a signal transducer and activator of transcription 5A JBrowse link 10 88,764,732 88,789,060 RGD:2291932
RGD:11554173
G Tp53bp2 tumor protein p53 binding protein, 2 JBrowse link 13 100,817,206 100,873,837 RGD:11554173
mammary Paget's disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link 10 86,367,596 86,391,728 RGD:2289933
sporadic breast cancer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:2290043
RGD:8552977
G Mlh1 mutL homolog 1 JBrowse link 8 119,486,655 119,523,716 RGD:2293522
G Phb prohibitin JBrowse link 10 83,476,107 83,488,878 RGD:2292408
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:12859037

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15625
    disease of cellular proliferation 5796
      Neoplasms by Site 5174
        Breast Neoplasms 1157
          breast cancer 504
            breast carcinoma 243
              Ehrlich tumor carcinoma 2
              bilateral breast cancer + 1
              breast adenocarcinoma + 14
              breast adenoid cystic carcinoma 0
              breast carcinoma in situ + 50
              breast ductal carcinoma + 104
              breast large cell neuroendocrine carcinoma 0
              breast lobular carcinoma + 14
              breast metaplastic carcinoma + 1
              breast myoepithelial carcinoma 0
              breast papillary carcinoma 0
              breast scirrhous carcinoma 0
              cribriform carcinoma 0
              female breast carcinoma 0
              lipid-rich carcinoma + 0
              luminal breast carcinoma 0
              nipple carcinoma + 0
              sebaceous breast carcinoma 0
              sporadic breast cancer 4
Path 2
Term Annotations click to browse term
  disease 15625
    disease of anatomical entity 14954
      nervous system disease 10224
        sensory system disease 4684
          skin disease 2467
            breast disease 1166
              Breast Neoplasms 1157
                breast cancer 504
                  breast carcinoma 243
                    Ehrlich tumor carcinoma 2
                    bilateral breast cancer + 1
                    breast adenocarcinoma + 14
                    breast adenoid cystic carcinoma 0
                    breast carcinoma in situ + 50
                    breast ductal carcinoma + 104
                    breast large cell neuroendocrine carcinoma 0
                    breast lobular carcinoma + 14
                    breast metaplastic carcinoma + 1
                    breast myoepithelial carcinoma 0
                    breast papillary carcinoma 0
                    breast scirrhous carcinoma 0
                    cribriform carcinoma 0
                    female breast carcinoma 0
                    lipid-rich carcinoma + 0
                    luminal breast carcinoma 0
                    nipple carcinoma + 0
                    sebaceous breast carcinoma 0
                    sporadic breast cancer 4
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.