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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:duodenal obstruction
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Accession:DOID:3558 term browser browse the term
Definition:Hindrance of the passage of luminal contents in the DUODENUM. Duodenal obstruction can be partial or complete, and caused by intrinsic or extrinsic factors. Simple obstruction is associated with diminished or stopped flow of luminal contents. Strangulating obstruction is associated with impaired blood flow to the duodenum in addition to obstructed flow of luminal contents.
Synonyms:exact_synonym: Duodenal Obstructions
 primary_id: MESH:D004380;   RDO:0000993
 xref: ICD10CM:K31.5;   NCI:C79548
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
 
duodenal atresia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 severity ISO mRNA:decreased expression:duodenum RGD PMID:23021139, PMID:21492869 RGD:14367881, RGD:14367883 NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
JBrowse link
G Cftr CF transmembrane conductance regulator ISO ClinVar Annotator: match by term: Duodenal stenosis ClinVar PMID:1370875, PMID:1377276, PMID:1380673, PMID:1381146, PMID:1384321, PMID:1536179, PMID:1673094, PMID:1756602, PMID:1997384, PMID:2210767, PMID:2220803, PMID:2233932, PMID:2236053, PMID:2300168, PMID:2378364, PMID:2475911, PMID:2570460, PMID:7537148, PMID:9135274, PMID:9439669, PMID:10782933, PMID:11280952, PMID:11737931, PMID:12833420, PMID:12940920, PMID:14685937, PMID:15141088, PMID:15221447, PMID:15246977, PMID:15367919, PMID:15371902, PMID:15482777, PMID:15619636, PMID:17206681, PMID:17692578, PMID:18463704, PMID:18507830, PMID:18639722, PMID:19846789, PMID:20595578, PMID:20705837, PMID:21152102, PMID:21602569, PMID:21658649, PMID:21825083, PMID:21976485, PMID:22293084, PMID:22383668, PMID:22942289, PMID:22981120, PMID:22992668, PMID:23457292, PMID:23891399, PMID:23951356, PMID:23974870, PMID:24033266, PMID:24559724, PMID:24973281, PMID:25148434, PMID:25741868, PMID:25741869, PMID:25981758, PMID:26467025, PMID:26618866, PMID:26631874, PMID:26968770, PMID:27214033, PMID:27298017, PMID:27334259, PMID:27805836, PMID:27898234, PMID:28129809, PMID:28129811, PMID:28325531, PMID:28492532, PMID:28603918, PMID:28606620, PMID:29099333, PMID:29126871, PMID:29327948, PMID:29451946, PMID:30311386 NCBI chr 4:42,693,263...42,860,679
Ensembl chr 4:42,692,836...42,860,676
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO RGD PMID:15185216 RGD:12801491 NCBI chr 1:200,590,951...200,696,946
Ensembl chr 1:200,590,953...200,696,928
JBrowse link
G Gucy2c guanylate cyclase 2C ISO ClinVar Annotator: match by term: Duodenal atresia ClinVar NCBI chr 4:170,659,993...170,740,274
Ensembl chr 4:170,659,998...170,740,274
JBrowse link
G LOC500354 similar to C030030A07Rik protein ISO ClinVar Annotator: match by term: Duodenal atresia ClinVar NCBI chr 4:170,807,633...170,822,514
Ensembl chr 4:170,820,594...170,821,995
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16023
    disease of anatomical entity 15278
      gastrointestinal system disease 4632
        intestinal disease 1514
          intestinal obstruction 39
            duodenal obstruction 5
              Pancreatic Lipomatosis Duodenal Stenosis 0
              chronic duodenal ileus 0
              duodenal atresia 5
              superior mesenteric artery syndrome + 0
Path 2
Term Annotations click to browse term
  disease 16023
    disease of anatomical entity 15278
      gastrointestinal system disease 4632
        Gastrointestinal Diseases 2552
          intestinal disease 1514
            duodenum disease 89
              duodenal obstruction 5
                Pancreatic Lipomatosis Duodenal Stenosis 0
                chronic duodenal ileus 0
                duodenal atresia 5
                superior mesenteric artery syndrome + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.