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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:meningioma
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Accession:DOID:3565 term browser browse the term
Definition:A central nervous system cancer that are manifested in the central nervous system and arise from the arachnoid cap cells of the arachnoid villi in the meninges. (DO)
Synonyms:exact_synonym: Meningiomas;   Meningiomatoses;   Meningiomatosis;   Multiple Meningioma;   Multiple Meningiomas;   intracranial meningioma;   meningothelial cell tumor;   neoplasm of the meninges;   primary meningeal tumor;   supratentorial meningioma
 primary_id: MESH:D008579
 xref: GARD:7015;   ICD10CM:D32.9;   NCI:C3230;   NCI:C4656;   NCI:C6971;   NCI:C7048;   ORDO:2495
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
 
meningioma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23334667 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193
JBrowse link
G ALAD aminolevulinate dehydratase ISO CTD Direct Evidence: marker/mechanism CTD PMID:16140629 NCBI chr11:67,736,643...67,752,399
Ensembl chr11:67,741,390...67,752,321
JBrowse link
G BAP1 BRCA1 associated protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25231345 NCBI chr20:37,355,499...37,364,298
Ensembl chr20:37,355,494...37,511,125
JBrowse link
G DNMT1 DNA methyltransferase 1 ISO ClinVar Annotator: match by term: Meningioma ClinVar NCBI chr20:50,872,213...50,928,352
Ensembl chr20:50,879,527...50,928,029
JBrowse link
G EPB41L3 erythrocyte membrane protein band 4.1 like 3 ISO RGD PMID:10888600 RGD:1300356 NCBI chr 7:71,734,325...72,001,496
Ensembl chr 7:71,747,333...71,868,751
JBrowse link
G G6PD glucose-6-phosphate dehydrogenase ISO ClinVar Annotator: match by term: Meningioma ClinVar PMID:1562739, PMID:2263506, PMID:6714986, PMID:8447319, PMID:8537082, PMID:9299858, PMID:10643148, PMID:11499668, PMID:16143877, PMID:17726510, PMID:20203002, PMID:21446359, PMID:23365477, PMID:25541721, PMID:25775246, PMID:26060661, PMID:26823837, PMID:28492532, PMID:30311386 NCBI chr  X:122,217,317...122,231,862
Ensembl chr  X:122,205,683...122,231,678
JBrowse link
G HGF hepatocyte growth factor disease_progression ISO protein:increased expression:brain: RGD PMID:12115353 RGD:8548633 NCBI chr18:21,329,688...21,410,257
Ensembl chr18:21,332,817...21,410,263
JBrowse link
G LOC479911 glutathione S-transferase Mu 3 ISO DNA: deletion: intron 6 RGD PMID:16598069 RGD:5688743 NCBI chr 6:42,187,869...42,191,274 JBrowse link
G LOC607874 cystatin-C-like ISO CTD Direct Evidence: marker/mechanism CTD PMID:19747051 NCBI chr23:49,562...53,618 JBrowse link
G MLLT10 MLLT10 histone lysine methyltransferase DOT1L cofactor ISO CTD Direct Evidence: marker/mechanism CTD PMID:21804547 NCBI chr 2:11,349,864...11,607,194
Ensembl chr 2:11,349,856...11,596,398
JBrowse link
G MN1 MN1 proto-oncogene, transcriptional regulator ISO DNA:translocation RGD PMID:7731706 RGD:1600423 NCBI chr26:21,216,912...21,261,518
Ensembl chr26:21,216,837...21,261,031
JBrowse link
G MTRR 5-methyltetrahydrofolate-homocysteine methyltransferase reductase susceptibility ISO DNA:SNP: :66A>G, (rs1801394) (human) RGD PMID:18483342 RGD:5508186 NCBI chr34:6,068,572...6,119,580
Ensembl chr34:6,070,046...6,098,312
JBrowse link
G NF2 neurofibromin 2 ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Intracranial meningioma
ClinVar Annotator: match by term: Meningioma
CTD
ClinVar
PMID:7868131, PMID:8162072, PMID:8379998, PMID:8882871, PMID:9718334, PMID:9884492, PMID:18033041, PMID:22711605, PMID:23334667, PMID:25741868, PMID:26073919, PMID:28492532, PMID:30311386 NCBI chr26:22,816,869...22,896,103
Ensembl chr26:22,816,551...22,894,196
JBrowse link
G PDGFB platelet derived growth factor subunit B ISO ClinVar Annotator: match by term: Meningioma ClinVar PMID:2212004, PMID:3133569, PMID:3969118 NCBI chr10:25,798,877...25,819,422
Ensembl chr10:25,798,938...25,817,746
JBrowse link
G PGR progesterone receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:8008172, PMID:19731987, PMID:19747051 NCBI chr21:447,197...552,511
Ensembl chr21:447,319...552,511
JBrowse link
G PTEN phosphatase and tensin homolog ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Meningioma
CTD
ClinVar
PMID:12085208, PMID:23442912, PMID:25741868, PMID:27535533, PMID:28492532 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 ISO ClinVar Annotator: match by term: Meningioma ClinVar PMID:11710892, PMID:19597050, PMID:20129283, PMID:22581653, PMID:24033266, PMID:24400668, PMID:24613995, PMID:24681144, PMID:25741868, PMID:28492532, PMID:29728395, PMID:30311386 NCBI chr23:8,278,844...8,374,614
Ensembl chr23:8,280,793...8,358,560
JBrowse link
G SMO smoothened, frizzled class receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:23334667 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033
JBrowse link
cavernous sinus meningioma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KMT2D lysine methyltransferase 2D ISO ClinVar Annotator: match by term: Cavernous Sinus Meningioma ClinVar NCBI chr27:5,516,866...5,556,303
Ensembl chr27:5,521,804...5,553,490
JBrowse link
G MSH3 mutS homolog 3 ISO ClinVar Annotator: match by term: Cavernous Sinus Meningioma ClinVar NCBI chr 3:26,335,788...26,520,633
Ensembl chr 3:26,336,403...26,518,521
JBrowse link
familial meningioma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MN1 MN1 proto-oncogene, transcriptional regulator susceptibility ISO CTD Direct Evidence: marker/mechanism OMIM
CTD
NCBI chr26:21,216,912...21,261,518
Ensembl chr26:21,216,837...21,261,031
JBrowse link
G NF2 neurofibromin 2 susceptibility ISO ClinVar Annotator: match by term: Meningioma, familial
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:20553997, PMID:25741868, PMID:28492532, PMID:30311386 NCBI chr26:22,816,869...22,896,103
Ensembl chr26:22,816,551...22,894,196
JBrowse link
G PDGFB platelet derived growth factor subunit B susceptibility ISO CTD Direct Evidence: marker/mechanism OMIM
CTD
NCBI chr10:25,798,877...25,819,422
Ensembl chr10:25,798,938...25,817,746
JBrowse link
G PTEN phosphatase and tensin homolog susceptibility ISO ClinVar Annotator: match by term: Meningioma, familial, susceptibility to
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:9399897, PMID:9467011, PMID:10232405, PMID:10353779, PMID:10400993, PMID:10468583, PMID:10749983, PMID:10848731, PMID:11238682, PMID:11685670, PMID:12844284, PMID:14518070, PMID:15805158, PMID:17286265, PMID:17392703, PMID:17427195, PMID:19265751, PMID:19668082, PMID:21194675, PMID:21956414, PMID:22252256, PMID:22381246, PMID:23442912, PMID:23470840, PMID:23475934, PMID:23695273, PMID:24033266, PMID:24052722, PMID:24136893, PMID:24778394, PMID:25022750, PMID:25132236, PMID:25157968, PMID:25326635, PMID:25669429, PMID:25741868, PMID:25756585, PMID:27477328, PMID:28492532, PMID:28526761, PMID:30287823, PMID:32238909 NCBI chr26:37,853,148...37,913,176
Ensembl chr26:37,835,661...37,913,176
JBrowse link
G SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 susceptibility ISO ClinVar Annotator: match by term: Meningioma, familial
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:22426308, PMID:23377182, PMID:23906836, PMID:23929686, PMID:25143307, PMID:25169753, PMID:25249420, PMID:25741868, PMID:26114992, PMID:27264197, PMID:28492532 NCBI chr 9:22,015,402...22,036,424
Ensembl chr 9:22,015,600...22,035,442
JBrowse link
G SUFU SUFU negative regulator of hedgehog signaling susceptibility ISO ClinVar Annotator: match by term: Meningioma, familial
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:22958902 NCBI chr28:14,992,989...15,115,499
Ensembl chr28:14,992,618...15,112,389
JBrowse link
Meningioma, Somatic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G G6PD glucose-6-phosphate dehydrogenase ISO ClinVar Annotator: match by term: Meningioma, somatic ClinVar PMID:1562739, PMID:2263506, PMID:6714986, PMID:8447319, PMID:8537082, PMID:9299858, PMID:10643148, PMID:11499668, PMID:16143877, PMID:17726510, PMID:20203002, PMID:21446359, PMID:23365477, PMID:25541721, PMID:25775246, PMID:26060661, PMID:26823837, PMID:28492532, PMID:30311386 NCBI chr  X:122,217,317...122,231,862
Ensembl chr  X:122,205,683...122,231,678
JBrowse link
G SCN5A sodium voltage-gated channel alpha subunit 5 ISO ClinVar Annotator: match by term: Meningioma, somatic ClinVar PMID:11710892, PMID:19597050, PMID:20129283, PMID:22581653, PMID:24033266, PMID:24400668, PMID:24613995, PMID:24681144, PMID:25741868, PMID:28492532, PMID:29728395, PMID:30311386 NCBI chr23:8,278,844...8,374,614
Ensembl chr23:8,280,793...8,358,560
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 12699
    disease of cellular proliferation 5499
      Neoplasms by Histologic Type 3539
        Nerve Tissue Neoplasms 636
          meningioma 22
            Gasserian ganglion meningioma 0
            Hunter-Macdonald Syndrome 0
            Radiation Induced Meningioma 0
            angiomatous meningioma 0
            benign meningioma 0
            bilateral meningioma of optic nerve 0
            brain meningioma + 0
            clear cell meningioma + 0
            ethmoid sinus ectopic meningioma 0
            familial meningioma + 8
            fibrous meningioma 0
            foramen magnum meningioma + 0
            internal auditory canal meningioma 0
            intraorbital meningioma 0
            lung meningioma 0
            lymphoplasmacyte-rich meningioma 0
            malignant leptomeningeal tumor + 0
            meninges hemangiopericytoma 0
            meninges sarcoma + 0
            meningothelial meningioma 0
            microcystic meningioma 0
            parapharyngeal meningioma 0
            pediatric meningioma + 0
            periocular meningioma 0
            petrous apex meningioma 0
            pineal region meningioma 0
            pituitary stalk meningioma 0
            posterior cranial fossa meningioma + 0
            psammomatous meningioma 0
            rhabdoid meningioma + 0
            secretory meningioma 0
            skin meningioma 0
            skull base meningioma + 2
            spinal canal and spinal cord meningioma + 0
            spinal meningioma 0
            suprasellar meningioma 0
            transitional meningioma 0
Path 2
Term Annotations click to browse term
  disease 12699
    disease of cellular proliferation 5499
      cancer 4019
        organ system cancer 3857
          nervous system cancer 1541
            central nervous system cancer 1241
              meningioma 22
                Gasserian ganglion meningioma 0
                Hunter-Macdonald Syndrome 0
                Radiation Induced Meningioma 0
                angiomatous meningioma 0
                benign meningioma 0
                bilateral meningioma of optic nerve 0
                brain meningioma + 0
                clear cell meningioma + 0
                ethmoid sinus ectopic meningioma 0
                familial meningioma + 8
                fibrous meningioma 0
                foramen magnum meningioma + 0
                internal auditory canal meningioma 0
                intraorbital meningioma 0
                lung meningioma 0
                lymphoplasmacyte-rich meningioma 0
                malignant leptomeningeal tumor + 0
                meninges hemangiopericytoma 0
                meninges sarcoma + 0
                meningothelial meningioma 0
                microcystic meningioma 0
                parapharyngeal meningioma 0
                pediatric meningioma + 0
                periocular meningioma 0
                petrous apex meningioma 0
                pineal region meningioma 0
                pituitary stalk meningioma 0
                posterior cranial fossa meningioma + 0
                psammomatous meningioma 0
                rhabdoid meningioma + 0
                secretory meningioma 0
                skin meningioma 0
                skull base meningioma + 2
                spinal canal and spinal cord meningioma + 0
                spinal meningioma 0
                suprasellar meningioma 0
                transitional meningioma 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.