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ONTOLOGY REPORT - ANNOTATIONS


Term:thyroid gland carcinoma
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Accession:DOID:3963 term browser browse the term
Definition:A thyroid gland cancer that has_material_basis_in epithelial cells. (DO)
Synonyms:exact_synonym: head and neck cancer, Thyroid;   thyroid carcinoma;   thyroid carcinomas
 primary_id: RDO:9003191
 xref: NCI:C4815
For additional species annotation, visit the Alliance of Genome Resources.


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thyroid gland carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp6v0c ATPase, H+ transporting, lysosomal V0 subunit C JBrowse link 17 24,163,865 24,169,678 RGD:14696825
G Ret ret proto-oncogene JBrowse link 6 118,151,748 118,197,744 RGD:8554872
familial medullary thyroid carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Insrr insulin receptor-related receptor JBrowse link 3 87,796,908 87,816,101 RGD:8554872
G Ntrk1 neurotrophic tyrosine kinase, receptor, type 1 JBrowse link 3 87,778,244 87,795,242 RGD:8554872
G Prlr prolactin receptor JBrowse link 15 10,177,238 10,349,190 RGD:13592920
G Ret ret proto-oncogene JBrowse link 6 118,151,748 118,197,744 RGD:7240710
RGD:8554872
RGD:11554173
Thyroid Cancer, Nonmedullary, 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxe1 forkhead box E1 JBrowse link 4 46,343,644 46,345,774 RGD:8554872
RGD:7240710
Thyroid Cancer, Nonmedullary, 5 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Habp2 hyaluronic acid binding protein 2 JBrowse link 19 56,287,109 56,320,820 RGD:7240710
RGD:8554872
Thyroid Carcinoma, Nonmedullary 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gm4756 predicted gene 4756 JBrowse link 12 72,620,119 72,629,021 RGD:8554872
G Nkx2-1 NK2 homeobox 1 JBrowse link 12 56,531,935 56,536,908 RGD:7240710
RGD:8554872
G Pcm1 pericentriolar material 1 JBrowse link 8 41,239,484 41,334,088 RGD:8554872
thyroid gland anaplastic carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbx7 chromobox 7 JBrowse link 15 79,915,804 79,971,143 RGD:9586729
RGD:9587357
G Sod2 superoxide dismutase 2, mitochondrial JBrowse link 17 13,007,839 13,018,119 RGD:11554173
G Trp53 transformation related protein 53 JBrowse link 11 69,580,348 69,591,873 RGD:8554872
thyroid gland follicular carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Braf Braf transforming gene JBrowse link 6 39,603,231 39,725,658 RGD:8554872
G Hras Harvey rat sarcoma virus oncogene JBrowse link 7 141,189,934 141,194,019 RGD:13592920
RGD:8554872
G Kras Kirsten rat sarcoma viral oncogene homolog JBrowse link 6 145,216,699 145,250,420 RGD:11554173
G Lrrc56 leucine rich repeat containing 56 JBrowse link 7 141,194,111 141,210,055 RGD:8554872
G Minpp1 multiple inositol polyphosphate histidine phosphatase 1 JBrowse link 19 32,485,769 32,515,370 RGD:8554872
RGD:13592920
G Nras neuroblastoma ras oncogene JBrowse link 3 103,058,285 103,067,914 RGD:8554872
RGD:13592920
G Prkar1a protein kinase, cAMP dependent regulatory, type I, alpha JBrowse link 11 109,649,023 109,669,663 RGD:13592920
G Pten phosphatase and tensin homolog JBrowse link 19 32,757,577 32,826,160 RGD:13592920
RGD:8554872
G Srgap1 SLIT-ROBO Rho GTPase activating protein 1 JBrowse link 10 121,780,991 122,047,911 RGD:8554872
RGD:13592920
G Thrb thyroid hormone receptor beta JBrowse link 14 17,659,225 18,040,097 RGD:11554173
RGD:13592920
thyroid gland Hurthle cell carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbx7 chromobox 7 JBrowse link 15 79,915,804 79,971,143 RGD:11352710
G Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 JBrowse link 8 69,894,163 69,903,182 RGD:7240710
RGD:8554872
G Psmb9 proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2) JBrowse link 17 34,182,030 34,187,330 RGD:6483332
thyroid gland medullary carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kras Kirsten rat sarcoma viral oncogene homolog JBrowse link 6 145,216,699 145,250,420 RGD:8554872
G Ret ret proto-oncogene JBrowse link 6 118,151,748 118,197,744 RGD:11554173
RGD:8554872
thyroid gland papillary carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Braf Braf transforming gene JBrowse link 6 39,603,231 39,725,658 RGD:7241798
RGD:8554872
RGD:13592920
G Brd4 bromodomain containing 4 JBrowse link 17 32,196,272 32,284,743 RGD:11085509
G Camk2n1 calcium/calmodulin-dependent protein kinase II inhibitor 1 JBrowse link 4 138,455,148 138,460,126 RGD:18337285
G Cat catalase JBrowse link 2 103,453,904 103,485,153 RGD:9068926
G Cbx7 chromobox 7 JBrowse link 15 79,915,804 79,971,143 RGD:9587357
G Ccnd1 cyclin D1 JBrowse link 7 144,929,931 144,939,937 RGD:13792605
G Cdh1 cadherin 1 JBrowse link 8 106,603,350 106,670,247 RGD:13792554
RGD:8554872
G Ctnnb1 catenin (cadherin associated protein), beta 1 JBrowse link 9 120,933,400 120,960,507 RGD:13792558
RGD:13792605
G Lef1 lymphoid enhancer binding factor 1 JBrowse link 3 131,110,277 131,224,357 RGD:13792605
G Lig4 ligase IV, DNA, ATP-dependent JBrowse link 8 9,970,020 9,977,696 RGD:8554872
G Msh2 mutS homolog 2 JBrowse link 17 87,672,532 87,723,713 RGD:8554872
G Myc myelocytomatosis oncogene JBrowse link 15 61,985,341 61,990,361 RGD:13792605
G Nkx2-1 NK2 homeobox 1 JBrowse link 12 56,531,935 56,536,908 RGD:13592920
G Palb2 partner and localizer of BRCA2 JBrowse link 7 122,107,262 122,132,980 RGD:8554872
G Pcm1 pericentriolar material 1 JBrowse link 8 41,239,484 41,334,088 RGD:8554872
G Plau plasminogen activator, urokinase JBrowse link 14 20,836,662 20,843,388 RGD:7241798
G Rap1gap Rap1 GTPase-activating protein JBrowse link 4 137,664,711 137,729,861 RGD:9835342
G Runx1 runt related transcription factor 1 JBrowse link 16 92,601,466 92,826,074 RGD:8554872
G Runx3 runt related transcription factor 3 JBrowse link 4 135,120,645 135,177,990 RGD:13792554
G Rxrg retinoid X receptor gamma JBrowse link 1 167,598,362 167,639,623 RGD:13792605
G Tpm3 tropomyosin 3, gamma JBrowse link 3 90,072,651 90,100,902 RGD:13792605
G Wdr3 WD repeat domain 3 JBrowse link 3 100,138,180 100,162,407 RGD:11041898

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 12769
    disease of cellular proliferation 5654
      Neoplasms by Histologic Type 3581
        cell type cancer 3047
          carcinoma 1888
            thyroid gland carcinoma 43
              spindle epithelial tumor with thymus-like differentiation tumor 0
              thyroid gland adenocarcinoma + 36
              thyroid gland anaplastic carcinoma 3
              thyroid gland medullary carcinoma + 5
              thyroid gland mucoepidermoid carcinoma 0
Path 2
Term Annotations click to browse term
  disease 12769
    disease of cellular proliferation 5654
      cancer 4089
        organ system cancer 3915
          endocrine gland cancer 1516
            thyroid gland cancer 48
              thyroid gland carcinoma 43
                spindle epithelial tumor with thymus-like differentiation tumor 0
                thyroid gland adenocarcinoma + 36
                thyroid gland anaplastic carcinoma 3
                thyroid gland medullary carcinoma + 5
                thyroid gland mucoepidermoid carcinoma 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.