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ONTOLOGY REPORT - ANNOTATIONS


Term:thyroid gland carcinoma
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Accession:DOID:3963 term browser browse the term
Definition:A thyroid gland cancer that has_material_basis_in epithelial cells. (DO)
Synonyms:exact_synonym: head and neck cancer, Thyroid;   thyroid carcinoma;   thyroid carcinomas
 primary_id: RDO:9003191
 xref: NCI:C4815
For additional species annotation, visit the Alliance of Genome Resources.


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thyroid gland carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp6v0c ATPase H+ transporting V0 subunit c JBrowse link NW_004936694 1,536,393 1,542,218 RGD:9068941
G Ret ret proto-oncogene JBrowse link NW_004936617 2,927,185 2,980,594 RGD:9068941
familial medullary thyroid carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Insrr insulin receptor related receptor JBrowse link NW_004936580 5,982,259 5,999,994 RGD:9068941
G Ntrk1 neurotrophic receptor tyrosine kinase 1 JBrowse link NW_004936580 6,002,168 6,021,690 RGD:9068941
G Prlr prolactin receptor JBrowse link NW_004936518 6,352,133 6,495,242 RGD:9068941
G Ret ret proto-oncogene JBrowse link NW_004936617 2,927,185 2,980,594 RGD:7240710
RGD:9068941
Thyroid Cancer, Nonmedullary, 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxe1 forkhead box E1 JBrowse link NW_004936524 6,619,128 6,620,278 RGD:7240710
RGD:9068941
Thyroid Cancer, Nonmedullary, 5 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Habp2 hyaluronan binding protein 2 JBrowse link NW_004936486 3,987,746 4,004,632 RGD:7240710
RGD:9068941
Thyroid Carcinoma, Nonmedullary 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004936494 10,517,488 10,520,567 RGD:7240710
RGD:9068941
G Pcm1 pericentriolar material 1 JBrowse link NW_004936554 7,906 86,187 RGD:9068941
thyroid gland anaplastic carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbx7 chromobox 7 JBrowse link NW_004936492 2,411,171 2,428,484 RGD:9068941
G Sod2 superoxide dismutase 2 JBrowse link NW_004936489 11,178,338 11,191,601 RGD:9068941
G Tp53 tumor protein p53 JBrowse link NW_004936595 919,807 935,367 RGD:9068941
thyroid gland follicular carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link NW_004936592 4,728,371 4,833,830 RGD:9068941
G Hras HRas proto-oncogene, GTPase JBrowse link NW_004936888 375,372 378,125 RGD:9068941
G Kras KRAS proto-oncogene, GTPase JBrowse link NW_004936548 2,078,568 2,113,877 RGD:9068941
G Lrrc56 leucine rich repeat containing 56 JBrowse link NW_004936888 379,622 397,647 RGD:9068941
G Minpp1 multiple inositol-polyphosphate phosphatase 1 JBrowse link NW_004936735 1,585,741 1,627,910 RGD:9068941
G Nras NRAS proto-oncogene, GTPase JBrowse link NW_004936627 73,413 82,590 RGD:9068941
G Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha JBrowse link NW_004936541 7,845,876 7,863,677 RGD:9068941
G Pten phosphatase and tensin homolog JBrowse link NW_004936735 1,252,414 1,338,318 RGD:9068941
G Srgap1 SLIT-ROBO Rho GTPase activating protein 1 JBrowse link NW_004936545 2,277,449 2,557,330 RGD:9068941
G Thrb thyroid hormone receptor beta JBrowse link NW_004936473 15,766,214 15,986,389 RGD:9068941
thyroid gland Hurthle cell carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbx7 chromobox 7 JBrowse link NW_004936492 2,411,171 2,428,484 RGD:9068941
G Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 JBrowse link NW_004936596 1,946,058 1,953,734 RGD:7240710
RGD:9068941
G Psmb9 proteasome 20S subunit beta 9 JBrowse link NW_004936476 25,894,313 25,899,132 RGD:9068941
thyroid gland medullary carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kras KRAS proto-oncogene, GTPase JBrowse link NW_004936548 2,078,568 2,113,877 RGD:9068941
G Ret ret proto-oncogene JBrowse link NW_004936617 2,927,185 2,980,594 RGD:9068941
thyroid gland papillary carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link NW_004936592 4,728,371 4,833,830 RGD:9068941
G Brd4 bromodomain containing 4 JBrowse link NW_004936596 5,176,682 5,246,102 RGD:9068941
G Camk2n1 calcium/calmodulin dependent protein kinase II inhibitor 1 JBrowse link NW_004936474 6,463,691 6,466,641 RGD:9068941
G Cat catalase JBrowse link NW_004936533 3,601,270 3,637,128 RGD:9068941
G Cbx7 chromobox 7 JBrowse link NW_004936492 2,411,171 2,428,484 RGD:9068941
G Cdh1 cadherin 1 JBrowse link NW_004936475 18,990,529 19,065,954 RGD:9068941
G Ctnnb1 catenin beta 1 JBrowse link NW_004936473 29,999,542 30,034,610 RGD:9068941
G Lef1 lymphoid enhancer binding factor 1 JBrowse link NW_004936818 453,635 569,194 RGD:9068941
G Lig4 DNA ligase 4 JBrowse link NW_004936472 3,861,833 3,867,943 RGD:9068941
G Msh2 mutS homolog 2 JBrowse link NW_004936508 4,943,987 5,013,356 RGD:9068941
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link NW_004936470 20,480,844 20,485,955 RGD:9068941
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004936494 10,517,488 10,520,567 RGD:9068941
G Palb2 partner and localizer of BRCA2 JBrowse link NW_004936501 8,246,927 8,273,258 RGD:9068941
G Pcm1 pericentriolar material 1 JBrowse link NW_004936554 7,906 86,187 RGD:9068941
G Plau plasminogen activator, urokinase JBrowse link NW_004936521 5,238,128 5,243,829 RGD:9068941
G Rap1gap RAP1 GTPase activating protein JBrowse link NW_004936474 7,242,528 7,284,342 RGD:9068941
G Runx1 RUNX family transcription factor 1 JBrowse link NW_004936500 7,621,328 7,710,909 RGD:9068941
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004936474 9,751,946 9,802,910 RGD:9068941
G Rxrg retinoid X receptor gamma JBrowse link NW_004936481 19,789,753 19,826,665 RGD:9068941
G Tpm3 tropomyosin 3 JBrowse link NW_004936580 3,860,185 3,893,251 RGD:9068941
G Wdr3 WD repeat domain 3 JBrowse link NW_004936627 2,972,939 2,999,052 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 11549
    disease of cellular proliferation 5150
      Neoplasms by Histologic Type 3311
        cell type cancer 2817
          carcinoma 1715
            thyroid gland carcinoma 41
              spindle epithelial tumor with thymus-like differentiation tumor 0
              thyroid gland adenocarcinoma + 34
              thyroid gland anaplastic carcinoma 3
              thyroid gland medullary carcinoma + 5
              thyroid gland mucoepidermoid carcinoma 0
Path 2
Term Annotations click to browse term
  disease 11549
    disease of cellular proliferation 5150
      cancer 3780
        organ system cancer 3622
          endocrine gland cancer 1401
            thyroid gland cancer 46
              thyroid gland carcinoma 41
                spindle epithelial tumor with thymus-like differentiation tumor 0
                thyroid gland adenocarcinoma + 34
                thyroid gland anaplastic carcinoma 3
                thyroid gland medullary carcinoma + 5
                thyroid gland mucoepidermoid carcinoma 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.