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ONTOLOGY REPORT - ANNOTATIONS


Term:thyroid gland papillary carcinoma
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Accession:DOID:3969 term browser browse the term
Definition:A differentiated thyroid gland carcinoma that is characterized by the small mushroom shape of the tumor which has a stem attached to the epithelial layer abd arises from the follicular cells of the thyroid gland. (DO)
Synonyms:exact_synonym: FAMILIAL NONMEDULLARY THYROID CANCER, PAPILLARY;   NONMEDULLARY THYROID CARCINOMA, PAPILLARY;   Nonmedullary Thyroid Carcinoma;   PACT;   PTC;   Papillary Carcinoma Of Thyroid;   TPC;   familial nonmedullary thyroid cancer;   papillary carcinoma of the thyroid gland;   papillary thyroid cancer;   papillary thyroid carcinoma
 primary_id: MESH:C536915
 alt_id: DOID:9005529;   RDO:0002639;   RDO:9003805
 xref: GARD:12027;   NCI:C4035;   OMIM:PS188550
For additional species annotation, visit the Alliance of Genome Resources.


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thyroid gland papillary carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:7241798
RGD:8554872
RGD:13592920
G Brd4 bromodomain containing 4 JBrowse link 7 14,222,101 14,303,055 RGD:11085509
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:9068926
G Cbx7 chromobox 7 JBrowse link 7 121,136,067 121,153,503 RGD:9587357
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:13792605
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:13792554
RGD:8554872
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:13792558
RGD:13792605
G Lef1 lymphoid enhancer binding factor 1 JBrowse link 2 236,232,115 236,345,061 RGD:13792605
G Lig4 DNA ligase 4 JBrowse link 16 85,331,771 85,339,496 RGD:8554872
G Msh2 mutS homolog 2 JBrowse link 6 11,215,951 11,274,916 RGD:8554872
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:13792605
G Nkx2-1 NK2 homeobox 1 JBrowse link 6 77,418,096 77,423,383 RGD:13592920
G Palb2 partner and localizer of BRCA2 JBrowse link 1 192,064,586 192,088,547 RGD:8554872
G Pcm1 pericentriolar material 1 JBrowse link 16 54,040,721 54,137,675 RGD:8554872
G Plau plasminogen activator, urokinase JBrowse link 15 3,644,296 3,650,765 RGD:7241798
G Rap1gap Rap1 GTPase-activating protein JBrowse link 5 156,008,868 156,074,350 RGD:9835342
G Runx1 RUNX family transcription factor 1 JBrowse link 11 32,765,147 33,003,061 RGD:8554872
G Runx3 RUNX family transcription factor 3 JBrowse link 5 153,507,093 153,531,137 RGD:13792554
G Rxrg retinoid X receptor gamma JBrowse link 13 85,818,473 85,868,555 RGD:13792605
G Tpm3 tropomyosin 3 JBrowse link 2 189,423,534 189,451,340 RGD:13792605
G Wdr3 WD repeat domain 3 JBrowse link 2 202,447,749 202,470,398 RGD:11041898
Thyroid Cancer, Nonmedullary, 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxe1 forkhead box E1 JBrowse link 5 61,954,549 61,957,357 RGD:8554872
RGD:7240710
Thyroid Cancer, Nonmedullary, 5 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Habp2 hyaluronan binding protein 2 JBrowse link 1 277,068,715 277,104,567 RGD:7240710
RGD:8554872
Thyroid Carcinoma, Nonmedullary 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nkx2-1 NK2 homeobox 1 JBrowse link 6 77,418,096 77,423,383 RGD:7240710
RGD:8554872
G Pcm1 pericentriolar material 1 JBrowse link 16 54,040,721 54,137,675 RGD:8554872

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15553
    disease of cellular proliferation 5809
      cancer 4144
        cell type cancer 3045
          carcinoma 1907
            adenocarcinoma 1322
              thyroid gland adenocarcinoma 34
                differentiated thyroid gland carcinoma 34
                  thyroid gland papillary carcinoma 23
                    Papillary Thyroid Carcinoma, with Papillary Renal Neoplasia 0
                    Papillary Thyroid Microcarcinoma 0
                    Thyroid Cancer, Nonmedullary, 4 1
                    Thyroid Cancer, Nonmedullary, 5 1
                    Thyroid Carcinoma, Nonmedullary 1 2
                    columnar cell variant papillary carcinoma 0
                    multicentric papillary thyroid carcinoma 0
                    nonencapsulated sclerosing carcinoma 0
                    papillary follicular thyroid adenocarcinoma 0
                    tall cell variant papillary carcinoma 0
Path 2
Term Annotations click to browse term
  disease 15553
    disease of cellular proliferation 5809
      cancer 4144
        organ system cancer 3844
          endocrine gland cancer 1528
            thyroid gland cancer 46
              thyroid gland carcinoma 41
                thyroid gland adenocarcinoma 34
                  differentiated thyroid gland carcinoma 34
                    thyroid gland papillary carcinoma 23
                      Papillary Thyroid Carcinoma, with Papillary Renal Neoplasia 0
                      Papillary Thyroid Microcarcinoma 0
                      Thyroid Cancer, Nonmedullary, 4 1
                      Thyroid Cancer, Nonmedullary, 5 1
                      Thyroid Carcinoma, Nonmedullary 1 2
                      columnar cell variant papillary carcinoma 0
                      multicentric papillary thyroid carcinoma 0
                      nonencapsulated sclerosing carcinoma 0
                      papillary follicular thyroid adenocarcinoma 0
                      tall cell variant papillary carcinoma 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.