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ONTOLOGY REPORT - ANNOTATIONS


Term:thyroid gland papillary carcinoma
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Accession:DOID:3969 term browser browse the term
Definition:A differentiated thyroid gland carcinoma that is characterized by the small mushroom shape of the tumor which has a stem attached to the epithelial layer abd arises from the follicular cells of the thyroid gland. (DO)
Synonyms:exact_synonym: FAMILIAL NONMEDULLARY THYROID CANCER, PAPILLARY;   NONMEDULLARY THYROID CARCINOMA, PAPILLARY;   Nonmedullary Thyroid Carcinoma;   PACT;   PTC;   Papillary Carcinoma Of Thyroid;   TPC;   familial nonmedullary thyroid cancer;   papillary carcinoma of the thyroid gland;   papillary thyroid cancer;   papillary thyroid carcinoma
 primary_id: MESH:C536915
 alt_id: DOID:9005529;   RDO:0002639;   RDO:9003805
 xref: GARD:12027;   NCI:C4035;   OMIM:PS188550
For additional species annotation, visit the Alliance of Genome Resources.


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thyroid gland papillary carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link NW_004955494 2,567,238 2,712,708 RGD:9068941
G Brd4 bromodomain containing 4 JBrowse link NW_004955495 7,959,033 7,989,216 RGD:9068941
G Camk2n1 calcium/calmodulin dependent protein kinase II inhibitor 1 JBrowse link NW_004955452 1,044,696 1,046,657 RGD:9068941
G Cat catalase JBrowse link NW_004955422 11,783,973 11,826,970 RGD:9068941
G Cbx7 chromobox 7 JBrowse link NW_004955413 25,079,627 25,100,039 RGD:9068941
G Ccnd1 cyclin D1 JBrowse link NW_004955422 16,449,921 16,462,676 RGD:9068941
G Cdh1 cadherin 1 JBrowse link NW_004955484 7,782,409 7,861,082 RGD:9068941
G Ctnnb1 catenin beta 1 JBrowse link NW_004955420 29,030,716 29,047,447 RGD:9068941
G Lef1 lymphoid enhancer binding factor 1 JBrowse link NW_004955496 1,728,840 1,827,749 RGD:9068941
G Lig4 DNA ligase 4 JBrowse link NW_004955404 3,606,077 3,615,193 RGD:9068941
G Msh2 mutS homolog 2 JBrowse link NW_004955441 14,188,315 14,247,608 RGD:9068941
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link NW_004955461 2,714,022 2,718,872 RGD:9068941
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004955409 24,612,490 24,616,360 RGD:9068941
G Palb2 partner and localizer of BRCA2 JBrowse link NW_004955493 2,149,053 2,175,482 RGD:9068941
G Pcm1 pericentriolar material 1 JBrowse link NW_004955552 1,675,477 1,768,902 RGD:9068941
G Plau plasminogen activator, urokinase JBrowse link NW_004955437 17,995,726 18,000,542 RGD:9068941
G Rap1gap RAP1 GTPase activating protein JBrowse link NW_004955452 1,886,557 1,950,942 RGD:9068941
G Runx1 RUNX family transcription factor 1 JBrowse link NW_004955407 34,108,653 34,342,657 RGD:9068941
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004955452 4,580,444 4,606,820 RGD:9068941
G Rxrg retinoid X receptor gamma JBrowse link NW_004955462 11,238,963 11,281,905 RGD:9068941
G Tpm3 tropomyosin 3 JBrowse link NW_004955545 715,860 746,580 RGD:9068941
G Wdr3 WD repeat domain 3 JBrowse link NW_004955435 21,038,053 21,069,213 RGD:9068941
Thyroid Cancer, Nonmedullary, 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxe1 forkhead box E1 JBrowse link NW_004955419 27,616,606 27,619,908 RGD:7240710
RGD:9068941
Thyroid Cancer, Nonmedullary, 5 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Habp2 hyaluronan binding protein 2 JBrowse link NW_004955431 18,572,690 18,604,399 RGD:7240710
RGD:9068941
Thyroid Carcinoma, Nonmedullary 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004955409 24,612,490 24,616,360 RGD:7240710
RGD:9068941
G Pcm1 pericentriolar material 1 JBrowse link NW_004955552 1,675,477 1,768,902 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 11416
    disease of cellular proliferation 5071
      cancer 3732
        cell type cancer 2780
          carcinoma 1691
            adenocarcinoma 1162
              thyroid gland adenocarcinoma 35
                differentiated thyroid gland carcinoma 35
                  thyroid gland papillary carcinoma 24
                    Papillary Thyroid Carcinoma, with Papillary Renal Neoplasia 0
                    Papillary Thyroid Microcarcinoma 0
                    Thyroid Cancer, Nonmedullary, 4 1
                    Thyroid Cancer, Nonmedullary, 5 1
                    Thyroid Carcinoma, Nonmedullary 1 2
                    columnar cell variant papillary carcinoma 0
                    multicentric papillary thyroid carcinoma 0
                    nonencapsulated sclerosing carcinoma 0
                    papillary follicular thyroid adenocarcinoma 0
                    tall cell variant papillary carcinoma 0
Path 2
Term Annotations click to browse term
  disease 11416
    disease of cellular proliferation 5071
      cancer 3732
        organ system cancer 3575
          endocrine gland cancer 1380
            thyroid gland cancer 47
              thyroid gland carcinoma 42
                thyroid gland adenocarcinoma 35
                  differentiated thyroid gland carcinoma 35
                    thyroid gland papillary carcinoma 24
                      Papillary Thyroid Carcinoma, with Papillary Renal Neoplasia 0
                      Papillary Thyroid Microcarcinoma 0
                      Thyroid Cancer, Nonmedullary, 4 1
                      Thyroid Cancer, Nonmedullary, 5 1
                      Thyroid Carcinoma, Nonmedullary 1 2
                      columnar cell variant papillary carcinoma 0
                      multicentric papillary thyroid carcinoma 0
                      nonencapsulated sclerosing carcinoma 0
                      papillary follicular thyroid adenocarcinoma 0
                      tall cell variant papillary carcinoma 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.