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ONTOLOGY REPORT - ANNOTATIONS


Term:thyroid gland papillary carcinoma
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Accession:DOID:3969 term browser browse the term
Definition:A differentiated thyroid gland carcinoma that is characterized by the small mushroom shape of the tumor which has a stem attached to the epithelial layer abd arises from the follicular cells of the thyroid gland. (DO)
Synonyms:exact_synonym: FAMILIAL NONMEDULLARY THYROID CANCER, PAPILLARY;   NONMEDULLARY THYROID CARCINOMA, PAPILLARY;   Nonmedullary Thyroid Carcinoma;   PACT;   PTC;   Papillary Carcinoma Of Thyroid;   TPC;   familial nonmedullary thyroid cancer;   papillary carcinoma of the thyroid gland;   papillary thyroid cancer;   papillary thyroid carcinoma
 primary_id: MESH:D000077273
 alt_id: DOID:9005529
 xref: GARD:12027;   NCI:C4035;   OMIM:PS188550
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thyroid gland papillary carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link NW_004936592 4,728,371 4,833,830 RGD:9068941
G Brd4 bromodomain containing 4 JBrowse link NW_004936596 5,176,682 5,246,102 RGD:9068941
G Camk2n1 calcium/calmodulin dependent protein kinase II inhibitor 1 JBrowse link NW_004936474 6,463,691 6,466,641 RGD:9068941
G Cat catalase JBrowse link NW_004936533 3,601,270 3,637,128 RGD:9068941
G Cbx7 chromobox 7 JBrowse link NW_004936492 2,411,171 2,428,484 RGD:9068941
G Cdh1 cadherin 1 JBrowse link NW_004936475 18,990,529 19,065,954 RGD:9068941
G Ctnnb1 catenin beta 1 JBrowse link NW_004936473 29,999,542 30,034,610 RGD:9068941
G Lef1 lymphoid enhancer binding factor 1 JBrowse link NW_004936818 453,635 569,194 RGD:9068941
G Lig4 DNA ligase 4 JBrowse link NW_004936472 3,861,833 3,867,943 RGD:9068941
G Msh2 mutS homolog 2 JBrowse link NW_004936508 4,943,987 5,013,356 RGD:9068941
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link NW_004936470 20,480,844 20,485,955 RGD:9068941
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004936494 10,517,488 10,520,567 RGD:9068941
G Palb2 partner and localizer of BRCA2 JBrowse link NW_004936501 8,246,927 8,273,258 RGD:9068941
G Pcm1 pericentriolar material 1 JBrowse link NW_004936554 7,906 86,187 RGD:9068941
G Plau plasminogen activator, urokinase JBrowse link NW_004936521 5,238,128 5,243,829 RGD:9068941
G Rap1gap RAP1 GTPase activating protein JBrowse link NW_004936474 7,242,528 7,284,342 RGD:9068941
G Runx1 RUNX family transcription factor 1 JBrowse link NW_004936500 7,621,328 7,710,909 RGD:9068941
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004936474 9,751,946 9,802,910 RGD:9068941
G Rxrg retinoid X receptor gamma JBrowse link NW_004936481 19,789,753 19,826,665 RGD:9068941
G Tpm3 tropomyosin 3 JBrowse link NW_004936580 3,860,185 3,893,251 RGD:9068941
G Wdr3 WD repeat domain 3 JBrowse link NW_004936627 2,972,939 2,999,052 RGD:9068941
Thyroid Cancer, Nonmedullary, 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Foxe1 forkhead box E1 JBrowse link NW_004936524 6,619,128 6,620,278 RGD:7240710
RGD:9068941
Thyroid Cancer, Nonmedullary, 5 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Habp2 hyaluronan binding protein 2 JBrowse link NW_004936486 3,987,746 4,004,632 RGD:7240710
RGD:9068941
Thyroid Carcinoma, Nonmedullary 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004936494 10,517,488 10,520,567 RGD:7240710
RGD:9068941
G Pcm1 pericentriolar material 1 JBrowse link NW_004936554 7,906 86,187 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 11549
    disease of cellular proliferation 5150
      cancer 3780
        cell type cancer 2817
          carcinoma 1715
            adenocarcinoma 1179
              thyroid gland adenocarcinoma 34
                differentiated thyroid gland carcinoma 34
                  thyroid gland papillary carcinoma 23
                    Papillary Thyroid Carcinoma, with Papillary Renal Neoplasia 0
                    Papillary Thyroid Microcarcinoma 0
                    Thyroid Cancer, Nonmedullary, 4 1
                    Thyroid Cancer, Nonmedullary, 5 1
                    Thyroid Carcinoma, Nonmedullary 1 2
                    columnar cell variant papillary carcinoma 0
                    multicentric papillary thyroid carcinoma 0
                    nonencapsulated sclerosing carcinoma 0
                    papillary follicular thyroid adenocarcinoma 0
                    tall cell variant papillary carcinoma 0
Path 2
Term Annotations click to browse term
  disease 11549
    disease of cellular proliferation 5150
      cancer 3780
        organ system cancer 3622
          endocrine gland cancer 1401
            thyroid gland cancer 46
              thyroid gland carcinoma 41
                thyroid gland adenocarcinoma 34
                  differentiated thyroid gland carcinoma 34
                    thyroid gland papillary carcinoma 23
                      Papillary Thyroid Carcinoma, with Papillary Renal Neoplasia 0
                      Papillary Thyroid Microcarcinoma 0
                      Thyroid Cancer, Nonmedullary, 4 1
                      Thyroid Cancer, Nonmedullary, 5 1
                      Thyroid Carcinoma, Nonmedullary 1 2
                      columnar cell variant papillary carcinoma 0
                      multicentric papillary thyroid carcinoma 0
                      nonencapsulated sclerosing carcinoma 0
                      papillary follicular thyroid adenocarcinoma 0
                      tall cell variant papillary carcinoma 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.