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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:urinary system cancer
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Accession:DOID:3996 term browser browse the term
Definition:An organ system cancer that is located_in the kidneys, ureteres, bladder or urethra. (DO)
Synonyms:exact_synonym: Cancer of Urinary Tract;   Cancer of the Urinary Tract;   Urinary Tract Cancer;   Urologic Cancer;   Urological Cancer;   urinary tract cancers;   urologic cancers;   urological cancers;   urothelial cancer
 xref: ICD10CM:C68.9;   ICD9CM:189.9
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
 
urinary system cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nqo1 NAD(P)H quinone dehydrogenase 1 ISO Urothelial neoplasms RGD PMID:17619904 RGD:2301044 NCBI chr19:38,422,210...38,437,103
Ensembl chr19:38,422,164...38,437,180
JBrowse link
G Wnt2 Wnt family member 2 ISO DNA:amplification RGD PMID:8064891 RGD:2291877 NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420
JBrowse link
atypical teratoid rhabdoid tumor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alk ALK receptor tyrosine kinase ISO ClinVar Annotator: match by term: Atypical teratoid rhabdoid tumor ClinVar PMID:25741868, PMID:28492532 NCBI chr 6:22,696,415...23,203,791
Ensembl chr 6:22,696,397...23,203,775
JBrowse link
G Atrx ATRX, chromatin remodeler ISO ClinVar Annotator: match by term: Atypical teratoid rhabdoid tumor ClinVar PMID:7697714, PMID:8968741, PMID:18414213, PMID:22995991, PMID:24082139, PMID:24728327, PMID:25741868, PMID:26467025, PMID:28293299, PMID:28492530, PMID:28492532, PMID:29304373, PMID:29602769, PMID:29910053 NCBI chr  X:76,820,110...76,979,155
Ensembl chr  X:76,692,970...76,708,878
Ensembl chr  X:76,692,970...76,708,878
JBrowse link
G Derl3 derlin 3 ISO ClinVar Annotator: match by term: Rhabdoid tumor predisposition syndrome 1 ClinVar PMID:28492532 NCBI chr20:13,692,102...13,707,645
Ensembl chr20:13,704,314...13,706,205
JBrowse link
G Smarcb1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 ISO ClinVar Annotator: match by term: Rhabdoid tumor predisposition syndrome 1
ClinVar Annotator: match by term: Malignant rhabdoid tumor, somatic
ClinVar Annotator: match by null
ClinVar Annotator: match by OMIM:609322
OMIM
ClinVar
PMID:9671307, PMID:10521299, PMID:10739763, PMID:12226744, PMID:18414213, PMID:18647326, PMID:19124645, PMID:21208904, PMID:24123847, PMID:24728327, PMID:25741868, PMID:28492532 NCBI chr20:13,679,955...13,702,821
Ensembl chr20:13,680,716...13,704,931
JBrowse link
G Tp53 tumor protein p53 ISO ClinVar Annotator: match by term: Atypical teratoid rhabdoid tumor ClinVar PMID:1565143, PMID:1591732, PMID:7565304, PMID:7783166, PMID:8550239, PMID:8718514, PMID:9218725, PMID:9242456, PMID:9364015, PMID:9667734, PMID:10519380, PMID:10922393, PMID:11370630, PMID:12826609, PMID:12885464, PMID:12917626, PMID:15722483, PMID:15925506, PMID:15951970, PMID:16401470, PMID:16494995, PMID:16551709, PMID:17015838, PMID:17311302, PMID:17606709, PMID:18511570, PMID:20128691, PMID:20522432, PMID:21343334, PMID:21761402, PMID:23538418, PMID:24033266, PMID:24122735, PMID:24835218, PMID:25157968, PMID:25741868, PMID:26205489, PMID:26225655, PMID:26619011, PMID:26786923, PMID:27621308, PMID:28492532 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
bladder carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr3 fibroblast growth factor receptor 3 ISO ClinVar Annotator: match by term: Bladder carcinoma ClinVar PMID:7773297, PMID:8589699, PMID:8845844, PMID:9438390, PMID:9843049, PMID:10471491, PMID:11038465, PMID:11055896, PMID:11314002, PMID:11429702, PMID:11879084, PMID:12009017, PMID:15772091, PMID:15880580, PMID:16841094, PMID:16912704, PMID:17384684, PMID:18000903, PMID:19088846, PMID:19331127, PMID:19381019, PMID:19749790, PMID:20453470, PMID:20542753, PMID:21273588, PMID:21510009, PMID:22869148, PMID:23200862, PMID:24476948, PMID:25157968, PMID:25606676, PMID:25741868, PMID:26619011, PMID:28249712, PMID:28492532, PMID:30311386 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Hras HRas proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Bladder carcinoma ClinVar PMID:16443854, PMID:18039947, PMID:19382114, PMID:21850009, PMID:22499344, PMID:22683711, PMID:22926243, PMID:24033266, PMID:25157968, PMID:25741868, PMID:26619011 NCBI chr 1:214,178,404...214,181,841
Ensembl chr 1:214,178,407...214,181,686
JBrowse link
G Lrrc56 leucine rich repeat containing 56 ISO ClinVar Annotator: match by term: Bladder carcinoma ClinVar PMID:16443854, PMID:18039947, PMID:19382114, PMID:21850009, PMID:22499344, PMID:22683711, PMID:22926243, PMID:24033266, PMID:25157968, PMID:25741868, PMID:26619011 NCBI chr 1:214,182,232...214,197,184
Ensembl chr 1:214,182,830...214,197,184
JBrowse link
G Pmf1 polyamine-modulated factor 1 disease_progression ISO RGD PMID:22682992 RGD:30296649 NCBI chr 2:187,751,770...187,771,933
Ensembl chr 2:187,751,776...187,771,865
JBrowse link
bladder urothelial carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl7a actin-like 7a ISO RGD PMID:29058301 RGD:13831338 NCBI chr 5:73,494,582...73,498,012
Ensembl chr 5:73,496,027...73,497,609
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:17611497, PMID:18256540, PMID:18392055, PMID:18504432, PMID:18611285, PMID:19418217, PMID:19487299, PMID:19853286, PMID:20233444, PMID:20453058, PMID:21464312, PMID:21512767, PMID:21793738, PMID:22538770, PMID:22610119, PMID:22722201, PMID:22722839, PMID:22980975, PMID:23237847, PMID:23348505, PMID:23700467, PMID:23728071, PMID:23934607, PMID:24190505, PMID:24657128, PMID:25157968, PMID:26619011, PMID:28492532 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:12068308, PMID:12460918, PMID:12460919, PMID:12960123, PMID:14612909, PMID:14679157, PMID:14688025, PMID:15035987, PMID:16439621, PMID:16474404, PMID:17096326, PMID:17119447, PMID:17311103, PMID:17603483, PMID:18039235, PMID:18042262, PMID:18186519, PMID:18368129, PMID:18413255, PMID:18794803, PMID:19010912, PMID:19206169, PMID:19238210, PMID:19376813, PMID:19383316, PMID:19537845, PMID:19913317, PMID:20350999, PMID:20619739, PMID:21129611, PMID:21483012, PMID:21784453, PMID:22180495, PMID:22310681, PMID:22649091, PMID:22773810, PMID:23273605, PMID:23352452, PMID:23833300, PMID:24033266, PMID:25157968, PMID:25463315, PMID:25741868, PMID:26619011, PMID:28492532, PMID:29595366, PMID:30311386 NCBI chr 4:67,389,331...67,520,549
Ensembl chr 4:67,396,192...67,520,356
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:7780957, PMID:8521414, PMID:9324288, PMID:10491434, PMID:16234564, PMID:16896043, PMID:21462282, PMID:25157968, PMID:25741868, PMID:26619011, PMID:28492532 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Crebbp CREB binding protein ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:21390126, PMID:21680795, PMID:21796119, PMID:22832583, PMID:23334668, PMID:23685749, PMID:23778141, PMID:26087898, PMID:26619011, PMID:27257180, PMID:28492532, PMID:29551561 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Ctnnb1 catenin beta 1 ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:9065402, PMID:9065403, PMID:9294210, PMID:10027390, PMID:10192393, PMID:10391090, PMID:10435629, PMID:10666372, PMID:11351304, PMID:11930117, PMID:11950921, PMID:12124804, PMID:15133491, PMID:24788118, PMID:25157968, PMID:26619011, PMID:26822237 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:16397024, PMID:18413839, PMID:22046346, PMID:22908275, PMID:23220880, PMID:25157968, PMID:26619011 NCBI chr10:86,367,596...86,391,728
Ensembl chr10:86,367,596...86,391,728
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:26619011 NCBI chr 7:2,989,202...3,010,610
Ensembl chr 7:2,989,340...3,010,350
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:25741868, PMID:26619011 NCBI chr 2:184,230,191...184,309,805
Ensembl chr 2:184,231,260...184,309,664
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 severity ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma
protein:increased expression:urothelial cells (human)
ClinVar PMID:1908846, PMID:7773297, PMID:8589699, PMID:8845844, PMID:8858131, PMID:9438390, PMID:9677066, PMID:9843049, PMID:10073901, PMID:10471491, PMID:10696568, PMID:11038465, PMID:11241532, PMID:11429702, PMID:11529856, PMID:11879084, PMID:12833394, PMID:15772091, PMID:16841094, PMID:17384684, PMID:18642369, PMID:19088846, PMID:19331127, PMID:19381019, PMID:19749790, PMID:20542753, PMID:21273588, PMID:22869148, PMID:23200862, PMID:24476948, PMID:25157968, PMID:25606676, PMID:25741868, PMID:26619011, PMID:28249712, PMID:28492532, PMID:30311386, PMID:28507621 RGD:38500205 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Hras HRas proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:1904555, PMID:3510078, PMID:11150980, PMID:12210337, PMID:12835555, PMID:14608654, PMID:16155195, PMID:16170316, PMID:16329078, PMID:16372351, PMID:16443854, PMID:16835863, PMID:16881968, PMID:16969868, PMID:17054105, PMID:17211612, PMID:17250658, PMID:17384584, PMID:17412879, PMID:17979197, PMID:18039947, PMID:18042262, PMID:18247425, PMID:18470943, PMID:18978862, PMID:19206176, PMID:19213030, PMID:19255327, PMID:19371735, PMID:19382114, PMID:19669404, PMID:19773371, PMID:20660566, PMID:20859122, PMID:20979192, PMID:21438134, PMID:21495179, PMID:21834037, PMID:21850009, PMID:22087699, PMID:22256804, PMID:22317973, PMID:22499344, PMID:22683711, PMID:22726224, PMID:22926243, PMID:23093928, PMID:23096712, PMID:23406027, PMID:23429430, PMID:23751039, PMID:23884457, PMID:24006476, PMID:24033266, PMID:24129065, PMID:24169525, PMID:24224811, PMID:24390138, PMID:25157968, PMID:25326635, PMID:25695684, PMID:25741868, PMID:25914166, PMID:26619011, PMID:27195699, PMID:27589201, PMID:28027064, PMID:28139825, PMID:28390077, PMID:28492532, PMID:29073591, PMID:29493581, PMID:168335863 NCBI chr 1:214,178,404...214,181,841
Ensembl chr 1:214,178,407...214,181,686
JBrowse link
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:18772396, PMID:19657110, PMID:19798509, PMID:19818334, PMID:20946881, PMID:21352804, PMID:21446021, PMID:22160010, PMID:22397365, PMID:22417203, PMID:22898539, PMID:23558169, PMID:24606448, PMID:25043048, PMID:25157968, PMID:25741868, PMID:26619011 NCBI chr 9:71,882,108...71,911,645
Ensembl chr 9:71,882,105...71,900,044
JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:2278970, PMID:3122217, PMID:12460918, PMID:15696205, PMID:16361624, PMID:16434492, PMID:16618717, PMID:18316791, PMID:18794081, PMID:19075190, PMID:19114683, PMID:19679400, PMID:20921462, PMID:20921465, PMID:21228335, PMID:22407852, PMID:22722830, PMID:23325582, PMID:25157968, PMID:26619011 NCBI chr 4:179,482,562...179,515,483
Ensembl chr 4:179,486,105...179,515,558
JBrowse link
G Lrrc56 leucine rich repeat containing 56 ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:1904555, PMID:3510078, PMID:11150980, PMID:12210337, PMID:12835555, PMID:14608654, PMID:16155195, PMID:16170316, PMID:16329078, PMID:16372351, PMID:16443854, PMID:16835863, PMID:16881968, PMID:16969868, PMID:17054105, PMID:17211612, PMID:17250658, PMID:17384584, PMID:17412879, PMID:17979197, PMID:18039947, PMID:18042262, PMID:18247425, PMID:18470943, PMID:18978862, PMID:19206176, PMID:19213030, PMID:19255327, PMID:19371735, PMID:19382114, PMID:19669404, PMID:19773371, PMID:20660566, PMID:20859122, PMID:20979192, PMID:21438134, PMID:21495179, PMID:21834037, PMID:21850009, PMID:22087699, PMID:22256804, PMID:22317973, PMID:22499344, PMID:22683711, PMID:22726224, PMID:22926243, PMID:23093928, PMID:23096712, PMID:23406027, PMID:23429430, PMID:23751039, PMID:23884457, PMID:24006476, PMID:24033266, PMID:24129065, PMID:24169525, PMID:24224811, PMID:24390138, PMID:25157968, PMID:25326635, PMID:25695684, PMID:25741868, PMID:25914166, PMID:26619011, PMID:27195699, PMID:27589201, PMID:28027064, PMID:28139825, PMID:28390077, PMID:28492532, PMID:29073591, PMID:29493581, PMID:168335863 NCBI chr 1:214,182,232...214,197,184
Ensembl chr 1:214,182,830...214,197,184
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:17366577, PMID:17551924, PMID:19915144, PMID:21107320, PMID:22197931, PMID:22588879, PMID:23569304, PMID:24033266, PMID:24803665, PMID:25157968, PMID:26619011, PMID:28049852 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Nras NRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:1654209, PMID:2278970, PMID:2407301, PMID:2674680, PMID:2989702, PMID:3102434, PMID:3122217, PMID:6587382, PMID:8120410, PMID:10821536, PMID:12460918, PMID:12727991, PMID:14508525, PMID:15899789, PMID:16273091, PMID:16291983, PMID:16434492, PMID:17332249, PMID:17517660, PMID:17699718, PMID:18375819, PMID:18390968, PMID:18633438, PMID:18668139, PMID:18948947, PMID:19075190, PMID:19657110, PMID:19775298, PMID:19880792, PMID:20130576, PMID:20149136, PMID:20179705, PMID:20406486, PMID:20619739, PMID:20736745, PMID:21079152, PMID:21107323, PMID:21305640, PMID:21576590, PMID:21729679, PMID:21829508, PMID:22407852, PMID:22499344, PMID:22718121, PMID:22761467, PMID:22773810, PMID:22962325, PMID:23076151, PMID:23392294, PMID:23400451, PMID:23414587, PMID:23431193, PMID:23515407, PMID:23538902, PMID:23569304, PMID:23614898, PMID:24006476, PMID:24033266, PMID:24148783, PMID:24370118, PMID:24671188, PMID:25157968, PMID:25348872, PMID:25695684, PMID:26619011, PMID:26821351, PMID:27050078, PMID:28492532, PMID:28780248 NCBI chr 2:205,553,119...205,563,716
Ensembl chr 2:205,553,163...205,560,791
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:15016963, PMID:15254419, PMID:15520168, PMID:15608678, PMID:15647370, PMID:15805248, PMID:15930273, PMID:16353168, PMID:16847462, PMID:16906227, PMID:16930767, PMID:17376864, PMID:17673550, PMID:18371219, PMID:18676830, PMID:18725974, PMID:19029981, PMID:19223544, PMID:19366826, PMID:19513541, PMID:19671852, PMID:19903786, PMID:20177704, PMID:20453058, PMID:20619739, PMID:21430269, PMID:21558396, PMID:21824802, PMID:22120714, PMID:22162582, PMID:22162589, PMID:22228622, PMID:22271473, PMID:22357840, PMID:22658544, PMID:22729222, PMID:22729223, PMID:22729224, PMID:22949682, PMID:23066039, PMID:23100325, PMID:23246288, PMID:23408298, PMID:23754335, PMID:23888070, PMID:24033266, PMID:24265155, PMID:24497998, PMID:24559322, PMID:24782230, PMID:25157968, PMID:25557259, PMID:25741868, PMID:26266975, PMID:26266985, PMID:26301495, PMID:26593112, PMID:26619011, PMID:26822237, PMID:26851524, PMID:27426476, PMID:27626068, PMID:27631024, PMID:27870750, PMID:28492532, PMID:28941273, PMID:29446767 NCBI chr 2:118,831,350...118,861,456
Ensembl chr 2:118,831,350...118,861,454
JBrowse link
G Pten phosphatase and tensin homolog ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:26619011, PMID:27535533, PMID:28492532, PMID:29706350 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Tp53 tumor protein p53 ISO ClinVar Annotator: match by term: Transitional cell bladder carcinoma ClinVar PMID:1349175, PMID:1359493, PMID:1565143, PMID:1565144, PMID:1569604, PMID:1591732, PMID:1631137, PMID:1631151, PMID:1644930, PMID:1673792, PMID:1679237, PMID:1683921, PMID:1686725, PMID:1737852, PMID:1918170, PMID:1978757, PMID:2046748, PMID:2259385, PMID:2531845, PMID:2554494, PMID:2826609, PMID:7565304, PMID:7651740, PMID:7707106, PMID:7732013, PMID:7750099, PMID:7783166, PMID:7791795, PMID:7881428, PMID:7887414, PMID:8023157, PMID:8062826, PMID:8080050, PMID:8099841, PMID:8118819, PMID:8164043, PMID:8242631, PMID:8336941, PMID:8364550, PMID:8401536, PMID:8423216, PMID:8425176, PMID:8479749, PMID:8527048, PMID:8550239, PMID:8633021, PMID:8718514, PMID:8825920, PMID:8829627, PMID:8869100, PMID:9020384, PMID:9096669, PMID:9157982, PMID:9218725, PMID:9242456, PMID:9268986, PMID:9290701, PMID:9364015, PMID:9407971, PMID:9525742, PMID:9546439, PMID:9569050, PMID:9572492, PMID:9598730, PMID:9627118, PMID:9632751, PMID:9635828, PMID:9662334, PMID:9667734, PMID:9825943, PMID:9839505, PMID:10064694, PMID:10229196, PMID:10411893, PMID:10432928, PMID:10519380, PMID:10567903, PMID:10589545, PMID:10713666, PMID:10761705, PMID:10797439, PMID:10864200, PMID:10871862, PMID:10914716, PMID:10922393, PMID:11051239, PMID:11051241, PMID:11139324, PMID:11180592, PMID:11370630, PMID:11429705, PMID:11479205, PMID:11593407, PMID:11782540, PMID:11793474, PMID:11896595, PMID:11920788, PMID:11920959, PMID:12007217, PMID:12034820, PMID:12076704, PMID:12124823, PMID:12406399, PMID:12509279, PMID:12672316, PMID:12695689, PMID:12726864, PMID:12826609, PMID:12885464, PMID:12901974, PMID:12909720, PMID:12917626, PMID:14559903, PMID:14584079, PMID:14673037, PMID:15004724, PMID:15017592, PMID:15037740, PMID:15381368, PMID:15390294, PMID:15580553, PMID:15607980, PMID:15607981, PMID:15722483, PMID:15825182, PMID:15850016, PMID:15925506, PMID:15951970, PMID:15977174, PMID:15982667, PMID:16288208, PMID:16312222, PMID:16337994, PMID:16401470, PMID:16489069, PMID:16494995, PMID:16508005, PMID:16551709, PMID:16682957, PMID:16736287, PMID:16818505, PMID:16827139, PMID:16861262, PMID:17015838, PMID:17311302, PMID:17390010, PMID:17401428, PMID:17417627, PMID:17427234, PMID:17540308, PMID:17541742, PMID:17567834, PMID:17572079, PMID:17606709, PMID:17636407, PMID:17724467, PMID:18208484, PMID:18307025, PMID:18453682, PMID:18511570, PMID:18555592, PMID:18628487, PMID:18685109, PMID:18989156, PMID:19012332, PMID:19101993, PMID:19147582, PMID:19171880, PMID:19336573, PMID:19367569, PMID:19378321, PMID:19468865, PMID:19556618, PMID:19681600, PMID:19834951, PMID:19850740, PMID:19913028, PMID:19930417, PMID:20013323, PMID:20028212, PMID:20113312, PMID:20127978, PMID:20128691, PMID:20234365, PMID:20308654, PMID:20407015, PMID:20505364, PMID:20506564, PMID:20516128, PMID:20522432, PMID:20693561, PMID:20805372, PMID:20878954, PMID:20972454, PMID:21056685, PMID:21059199, PMID:21115975, PMID:21159183, PMID:21187651, PMID:21232794, PMID:21305319, PMID:21319261, PMID:21343334, PMID:21356188, PMID:21470402, PMID:21483000, PMID:21484931, PMID:21514416, PMID:21519010, PMID:21535297, PMID:21552135, PMID:21601526, PMID:21626334, PMID:21674059, PMID:21747090, PMID:21761402, PMID:22006311, PMID:22052707, PMID:22090360, PMID:22109999, PMID:22110706, PMID:22114072, PMID:22186996, PMID:22198284, PMID:22233476, PMID:22265402, PMID:22672556, PMID:22710932, PMID:22713868, PMID:22768918, PMID:22811390, PMID:22844452, PMID:22847613, PMID:22866089, PMID:22887876, PMID:22899716, PMID:22915647, PMID:22919068, PMID:22923379, PMID:22983585, PMID:22999923, PMID:23031740, PMID:23161690, PMID:23165212, PMID:23172776, PMID:23175693, PMID:23246812, PMID:23259501, PMID:23263379, PMID:23265383, PMID:23315175, PMID:23334668, PMID:23355100, PMID:23406775, PMID:23538418, PMID:23625637, PMID:23630318, PMID:23667202, PMID:23792586, PMID:23894400, PMID:23950206, PMID:24033266, PMID:24038938, PMID:24122735, PMID:24381225, PMID:24384472, PMID:24395441, PMID:24487413, PMID:24501221, PMID:24573247, PMID:24590827, PMID:24603336, PMID:24641375, PMID:24651012, PMID:24651015, PMID:24677579, PMID:24702488, PMID:24728327, PMID:24766216, PMID:24810334, PMID:24835218, PMID:24940547, PMID:25119136, PMID:25157968, PMID:25293557, PMID:25294809, PMID:25339994, PMID:25503501, PMID:25504633, PMID:25525159, PMID:25584008, PMID:25584637, PMID:25587027, PMID:25619955, PMID:25634208, PMID:25691460, PMID:25741868, PMID:25787918, PMID:25896519, PMID:25925845, PMID:25927356, PMID:25945745, PMID:25952993, PMID:25980754, PMID:26014290, PMID:26024390, PMID:26205489, PMID:26225655, PMID:26230955, PMID:26270727, PMID:26425688, PMID:26467025, PMID:26497680, PMID:26554828, PMID:26556299, PMID:26585234, PMID:26619011, PMID:26659639, PMID:26681312, PMID:26781615, PMID:26786923, PMID:26787237, PMID:26822237, PMID:26845104, PMID:26878390, PMID:26911350, PMID:26976419, PMID:27022024, PMID:27077130, PMID:27179933, PMID:27189670, PMID:27276561, PMID:27276934, PMID:27374712, PMID:27463065, PMID:27489289, PMID:27493922, PMID:27523101, PMID:27533082, PMID:27616075, PMID:27621308, PMID:27622479, PMID:27680515, PMID:27683180, PMID:27724982, PMID:27895058, PMID:27959731, PMID:28135145, PMID:28152038, PMID:28279309, PMID:28369373, PMID:28453743, PMID:28472496, PMID:28476805, PMID:28492532, PMID:28724667, PMID:28802053, PMID:28861920, PMID:28915717, PMID:28975465, PMID:29025599, PMID:29070607, PMID:29126202, PMID:29324801, PMID:29416011, PMID:29470806, PMID:29478780, PMID:29489754, PMID:29752822, PMID:29753700, PMID:29979965, PMID:30076369, PMID:30087429, PMID:30128536, PMID:30216591, PMID:30224644, PMID:30297838, PMID:30311369, PMID:30327374, PMID:30352134, PMID:30450585, PMID:30630526, PMID:30720243, PMID:30840781 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
chromophobe renal cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnf1a HNF1 homeobox A ISO ClinVar Annotator: match by term: Chromophobe renal cell carcinoma ClinVar PMID:9754819, PMID:15649945, PMID:19929997, PMID:21696527, PMID:22432108, PMID:25741868, PMID:28492532 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Hnf1b HNF1 homeobox B ISO ClinVar Annotator: match by term: Chromophobe renal cell carcinoma ClinVar PMID:15649945, PMID:16371430, PMID:25536396, PMID:25700310, PMID:25741868 NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
Chromosome 11p Deletion Syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elp4 elongator acetyltransferase complex subunit 4 ISO ClinVar Annotator: match by term: 11p deletion syndrome ClinVar NCBI chr 3:95,733,810...95,954,987 JBrowse link
G Pax6 paired box 6 ISO ClinVar Annotator: match by term: 11p deletion syndrome ClinVar PMID:9727514, PMID:12868034, PMID:15086958, PMID:17417613, PMID:18776953, PMID:25741868, PMID:28492532 NCBI chr 3:95,700,241...95,728,682
Ensembl chr 3:95,707,386...95,728,624
JBrowse link
clear cell renal cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor ISO mRNA:increased expression:renal cortex (human) RGD PMID:21947243 RGD:7244181 NCBI chr20:4,363,152...4,366,079
Ensembl chr20:4,363,152...4,366,079
JBrowse link
G Atp5mc2 ATP synthase membrane subunit c locus 2 ISO RGD PMID:28672194 RGD:14696810 NCBI chr 7:144,264,207...144,272,578
Ensembl chr 7:144,264,199...144,272,578
JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b ISO RGD PMID:28672194 RGD:14696810 NCBI chr 2:208,566,385...208,577,147
Ensembl chr 2:208,566,385...208,577,146
JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP ISO RGD PMID:28672194 RGD:14696810 NCBI chr11:32,081,606...32,087,918
Ensembl chr11:32,081,574...32,088,002
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO mRNA, protein:increased expression:kidney RGD PMID:28551630 RGD:15036804 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Dnmt1 DNA methyltransferase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:27292127 NCBI chr 8:21,922,515...21,968,495
Ensembl chr 8:21,922,515...21,968,495
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha ISO CTD Direct Evidence: marker/mechanism CTD PMID:27292127 NCBI chr 6:28,205,375...28,346,052
Ensembl chr 6:28,235,695...28,340,577
JBrowse link
G Egln3 egl-9 family hypoxia-inducible factor 3 disease_progression ISO RGD PMID:23788753 RGD:13506731 NCBI chr 6:75,050,329...75,075,795
Ensembl chr 6:75,050,329...75,075,795
JBrowse link
G Eng endoglin severity ISO protein:increased expression:tumor, vasculature (human)
protein:decreased expression:kidney, tumor (human)
RGD PMID:22204709, PMID:16536758 RGD:7248775, RGD:7248780 NCBI chr 3:11,679,530...11,717,486
Ensembl chr 3:11,679,530...11,717,485
JBrowse link
G Ep300 E1A binding protein p300 severity ISO mRNA:altered expression:kidney, tumor (human)
mRNA, protein:increased expression:kidney
RGD PMID:23029358, PMID:28551630 RGD:7296925, RGD:15036804 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G F2 coagulation factor II ISO protein:increased expression:brain RGD PMID:22065054 RGD:6893520 NCBI chr 3:80,529,468...80,542,993
Ensembl chr 3:80,529,428...80,543,031
JBrowse link
G Flt4 Fms related receptor tyrosine kinase 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25239121 NCBI chr10:35,078,782...35,120,296
Ensembl chr10:35,078,726...35,121,599
JBrowse link
G Gstp1 glutathione S-transferase pi 1 ISO RGD PMID:10383153 RGD:6906878 NCBI chr 1:219,291,679...219,294,147
Ensembl chr 1:219,291,679...219,294,147
JBrowse link
G Hnf1a HNF1 homeobox A ISO ClinVar Annotator: match by term: Clear cell renal cell carcinoma
ClinVar Annotator: match by term: Clear cell carcinoma of kidney
ClinVar PMID:8866553, PMID:8945470, PMID:9032114, PMID:9045858, PMID:9075818, PMID:9166684, PMID:9313763, PMID:9392505, PMID:9439666, PMID:9754819, PMID:10333057, PMID:10447526, PMID:10754480, PMID:11058894, PMID:11315851, PMID:12050210, PMID:12355088, PMID:12530534, PMID:12574234, PMID:12618559, PMID:15649945, PMID:15928245, PMID:17054605, PMID:17407387, PMID:17440016, PMID:17573900, PMID:17937063, PMID:17989309, PMID:18414213, PMID:18672310, PMID:19929997, PMID:21051477, PMID:21628466, PMID:21696527, PMID:22432108, PMID:23551881, PMID:23607861, PMID:25174781, PMID:25741868, PMID:26467025, PMID:28492532 NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Igf1r insulin-like growth factor 1 receptor ISO xenograph of human clear cell renal cancer cells in mouse RGD PMID:19509240 RGD:7242921 NCBI chr 1:128,924,921...129,213,816
Ensembl chr 1:128,924,966...129,206,516
JBrowse link
G Kat8 lysine acetyltransferase 8 ISO mRNA, protein:decreased expression:kidney (human) RGD PMID:23394073 RGD:9586034 NCBI chr 1:199,360,645...199,372,925
Ensembl chr 1:199,360,645...199,372,923
JBrowse link
G Mmp12 matrix metallopeptidase 12 ISO RGD PMID:11576837 RGD:2290421 NCBI chr 8:5,594,717...5,616,494
Ensembl chr 8:5,606,592...5,616,493
JBrowse link
G Mthfr methylenetetrahydrofolate reductase susceptibility
severity
ISO DNA:transition, transversion:cds:g.677C>T, g.1298A>C (human) RGD PMID:21489764, PMID:20039875 RGD:6893474, RGD:6893632 NCBI chr 5:164,844,642...164,864,360
Ensembl chr 5:164,845,925...164,860,910
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor severity ISO protein:increased expression:kidney (human) RGD PMID:21881486 RGD:7207420 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase ISO ClinVar Annotator: match by term: Clear cell carcinoma of kidney ClinVar PMID:10987279 NCBI chr 4:145,282,828...145,289,367
Ensembl chr 4:145,282,797...145,289,326
JBrowse link
G Pak4 p21 (RAC1) activated kinase 4 disease_progression ISO RGD PMID:25744653 RGD:13504816 NCBI chr 1:85,162,462...85,201,746
Ensembl chr 1:85,162,452...85,201,757
JBrowse link
G Pak6 p21 (RAC1) activated kinase 6 disease_progression ISO RGD PMID:24715215 RGD:13506722 NCBI chr 3:110,442,175...110,486,317
Ensembl chr 3:110,442,637...110,487,526
JBrowse link
G Pbrm1 polybromo 1 ISO ClinVar Annotator: match by term: Clear cell carcinoma of kidney ClinVar PMID:25911086 NCBI chr16:7,103,714...7,202,899
Ensembl chr16:7,103,998...7,200,362
JBrowse link
G Pdgfb platelet derived growth factor subunit B disease_progression ISO RGD PMID:25766258, PMID:23879920 RGD:13504817, RGD:13506650 NCBI chr 7:121,215,458...121,233,092
Ensembl chr 7:121,214,628...121,232,741
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 ISO mRNA:altered expression:kidney (human) RGD PMID:21082031 RGD:11039407 NCBI chr10:75,334,200...75,341,197
Ensembl chr10:75,335,146...75,341,197
JBrowse link
G Srsf2 serine and arginine rich splicing factor 2 ISO mRNA:altered expression:kidney (human) RGD PMID:21082031 RGD:11039407 NCBI chr10:105,792,779...105,795,986
Ensembl chr10:105,792,779...105,795,958
JBrowse link
G Srsf4 serine and arginine rich splicing factor 4 ISO mRNA:altered expression:kidney (human) RGD PMID:21082031 RGD:11039407 NCBI chr 5:150,032,999...150,060,769
Ensembl chr 5:150,032,999...150,060,765
JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 ISO mRNA:altered expression:kidney (human) RGD PMID:21082031 RGD:11039407 NCBI chr 6:104,611,026...104,640,033
Ensembl chr 6:104,611,026...104,615,302
JBrowse link
G Srsf6 serine and arginine rich splicing factor 6 ISO mRNA:altered expression:kidney (human) RGD PMID:21082031 RGD:11039407 NCBI chr 3:159,305,345...159,310,668
Ensembl chr 3:159,305,345...159,310,668
JBrowse link
G Srsf7 serine and arginine rich splicing factor 7 ISO mRNA:altered expression:kidney (human) RGD PMID:21082031 RGD:11039407 NCBI chr 6:2,879,312...2,886,505
Ensembl chr 6:2,880,518...2,886,465
JBrowse link
G Tp53 tumor protein p53 ISO mRNA, protein:increased expression:kidney RGD PMID:28551630 RGD:15036804 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Vegfa vascular endothelial growth factor A ISO CTD Direct Evidence: marker/mechanism CTD PMID:25239121 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
Denys-Drash syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO protein:decreased expression:sertoli cell RGD PMID:16245160 RGD:1643343 NCBI chr  X:67,656,253...67,828,998
Ensembl chr  X:67,656,253...67,829,026
JBrowse link
G Wt1 WT1 transcription factor ISO ClinVar Annotator: match by term: Drash syndrome
ClinVar Annotator: match by term: WILMS TUMOR AND PSEUDO- OR TRUE HERMAPHRODITISM
ClinVar Annotator: match by OMIM:194080
ClinVar
OMIM
PMID:1302008, PMID:1327525, PMID:1338906, PMID:1350671, PMID:1655284, PMID:1658787, PMID:1671709, PMID:6307071, PMID:7795587, PMID:8295405, PMID:8388765, PMID:8621495, PMID:8975729, PMID:9090524, PMID:9108089, PMID:9398852, PMID:9475094, PMID:9499425, PMID:9529364, PMID:9607189, PMID:10094551, PMID:10470095, PMID:10505700, PMID:10571943, PMID:10603123, PMID:10762296, PMID:11182928, PMID:12050205, PMID:12471221, PMID:12640141, PMID:12970737, PMID:15150775, PMID:15266301, PMID:15483024, PMID:15509792, PMID:16717397, PMID:16987884, PMID:17496156, PMID:17541636, PMID:17630404, PMID:17853480, PMID:18203154, PMID:18385267, PMID:18559874, PMID:18591546, PMID:19171881, PMID:19221039, PMID:19484379, PMID:19494353, PMID:19536888, PMID:20368469, PMID:20413658, PMID:20435628, PMID:20442690, PMID:21384108, PMID:21508141, PMID:21851196, PMID:22465478, PMID:22703879, PMID:23117548, PMID:23295293, PMID:23349334, PMID:23497137, PMID:23515051, PMID:23715653, PMID:23935527, PMID:24033266, PMID:24138039, PMID:24161391, PMID:24402088, PMID:24728327, PMID:24856380, PMID:25110071, PMID:25451826, PMID:25501161, PMID:25741868, PMID:25818337, PMID:25932436, PMID:26069768, PMID:26358501, PMID:26467025, PMID:26725263, PMID:27013732, PMID:27241786, PMID:27300205, PMID:27719739, PMID:27899157, PMID:28204945, PMID:28334862, PMID:28492532, PMID:28811308, PMID:29668062, PMID:30963316, PMID:31937884, PMID:32581362, PMID:12161615 RGD:1580624 NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
JBrowse link
Global Developmental Delay, Lung Cysts, Overgrowth, and Wilms Tumor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1 ribonuclease III ISO ClinVar Annotator: match by term: GLOBAL DEVELOPMENTAL DELAY, LUNG CYSTS, OVERGROWTH, AND WILMS TUMOR
ClinVar Annotator: match by term: GLOW SYNDROME
ClinVar
OMIM
PMID:24676357, PMID:28492532 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
JBrowse link
hereditary renal cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnase1 deoxyribonuclease 1 ISO ClinVar Annotator: match by term: Hereditary renal cell carcinoma ClinVar NCBI chr10:11,757,681...11,760,672
Ensembl chr10:11,757,682...11,760,620
JBrowse link
G Egf epidermal growth factor ISO ClinVar Annotator: match by term: Hereditary renal cell carcinoma ClinVar NCBI chr 2:68,820,616...68,895,537 JBrowse link
G Parp1 poly (ADP-ribose) polymerase 1 ISO ClinVar Annotator: match by term: Hereditary renal cell carcinoma ClinVar NCBI chr13:98,857,255...98,889,444
Ensembl chr13:98,857,177...98,889,716
JBrowse link
G Sdha succinate dehydrogenase complex flavoprotein subunit A ISO ClinVar Annotator: match by term: Hereditary renal cell carcinoma ClinVar PMID:28492532, PMID:28546994 NCBI chr 1:31,545,631...31,570,601
Ensembl chr 1:31,545,631...31,570,601
JBrowse link
G Trap1 TNF receptor-associated protein 1 ISO ClinVar Annotator: match by term: Hereditary renal cell carcinoma ClinVar NCBI chr10:11,724,032...11,757,682
Ensembl chr10:11,724,032...11,757,681
JBrowse link
kidney cancer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msh2 mutS homolog 2 ISO ClinVar Annotator: match by term: Kidney cancer ClinVar PMID:18325052, PMID:21926548, PMID:24506336, PMID:24763289, PMID:25637381, PMID:25741868, PMID:26467025, PMID:26878173, PMID:26951660, PMID:28195393, PMID:28202063, PMID:28492532, PMID:28640387, PMID:29887214 NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO ClinVar Annotator: match by term: Kidney cancer ClinVar PMID:24631838, PMID:25741868, PMID:26018084, PMID:26619011, PMID:27159400 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Nras NRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Kidney cancer ClinVar PMID:1654209, PMID:2278970, PMID:2674680, PMID:3122217, PMID:6587382, PMID:8120410, PMID:10821536, PMID:12460918, PMID:12727991, PMID:14508525, PMID:15899789, PMID:16273091, PMID:16291983, PMID:16434492, PMID:17699718, PMID:18390968, PMID:18633438, PMID:18668139, PMID:18948947, PMID:19075190, PMID:19657110, PMID:19880792, PMID:20130576, PMID:20149136, PMID:20179705, PMID:20406486, PMID:20619739, PMID:20736745, PMID:21107323, PMID:21305640, PMID:21576590, PMID:21729679, PMID:21829508, PMID:22407852, PMID:22499344, PMID:22718121, PMID:22761467, PMID:22773810, PMID:23076151, PMID:23392294, PMID:23400451, PMID:23414587, PMID:23515407, PMID:23538902, PMID:23569304, PMID:23614898, PMID:24006476, PMID:24033266, PMID:24148783, PMID:24370118, PMID:24671188, PMID:25157968, PMID:25348872, PMID:25695684, PMID:26619011, PMID:26821351, PMID:27050078, PMID:28492532, PMID:28780248 NCBI chr 2:205,553,119...205,563,716
Ensembl chr 2:205,553,163...205,560,791
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha ISO ClinVar Annotator: match by term: Kidney cancer ClinVar PMID:15016963, PMID:15254419, PMID:15520168, PMID:15608678, PMID:15647370, PMID:15805248, PMID:16906227, PMID:16930767, PMID:17376864, PMID:17673550, PMID:18676830, PMID:18725974, PMID:19029981, PMID:19223544, PMID:19366826, PMID:19513541, PMID:19903786, PMID:20453058, PMID:20619739, PMID:21430269, PMID:21558396, PMID:21824802, PMID:22162582, PMID:22162589, PMID:22271473, PMID:22658544, PMID:22729222, PMID:22729223, PMID:22729224, PMID:23066039, PMID:23100325, PMID:23408298, PMID:23888070, PMID:24033266, PMID:24265155, PMID:24782230, PMID:25157968, PMID:25741868, PMID:26266975, PMID:26266985, PMID:26619011, PMID:26822237, PMID:27626068, PMID:27631024, PMID:28492532, PMID:29446767 NCBI chr 2:118,831,350...118,861,456
Ensembl chr 2:118,831,350...118,861,454
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO associated with Birt-Hogg-Dube Syndrome; mRNA:increased expression:kidney (human) RGD PMID:23150719 RGD:7242016 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Pten phosphatase and tensin homolog ISO ClinVar Annotator: match by term: Kidney cancer ClinVar PMID:9467011, PMID:9915974, PMID:10866302, PMID:11504908, PMID:11875759, PMID:16773562, PMID:17526801, PMID:17942903, PMID:18767981, PMID:19457929, PMID:20085938, PMID:20300775, PMID:21659347, PMID:21822720, PMID:21824802, PMID:21828076, PMID:22266152, PMID:22320991, PMID:22327138, PMID:22595938, PMID:23335809, PMID:23399955, PMID:23470840, PMID:24778394, PMID:25157968, PMID:25527629, PMID:25741868, PMID:26619011, PMID:26798346, PMID:27477328, PMID:27535533, PMID:28475857, PMID:28492532, PMID:29359449, PMID:29706350 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Sf3b2 splicing factor 3b, subunit 2 ISO ClinVar Annotator: match by term: Kidney cancer ClinVar PMID:26619011 NCBI chr 1:220,645,685...220,665,611
Ensembl chr 1:220,645,672...220,665,603
JBrowse link
G Tp53 tumor protein p53 ISO ClinVar Annotator: match by term: Kidney cancer ClinVar PMID:1349175, PMID:1565143, PMID:1565144, PMID:1644930, PMID:1737852, PMID:7651740, PMID:7707106, PMID:7732013, PMID:7887414, PMID:8023157, PMID:8080050, PMID:8118819, PMID:8401536, PMID:8633021, PMID:8718514, PMID:8829627, PMID:8869100, PMID:9096669, PMID:9242456, PMID:9290701, PMID:9546439, PMID:9572492, PMID:9635828, PMID:9662334, PMID:9667734, PMID:10064694, PMID:10366100, PMID:10432928, PMID:10589545, PMID:10753186, PMID:10761705, PMID:10864200, PMID:10922393, PMID:11370630, PMID:11429705, PMID:11793474, PMID:11896595, PMID:11920788, PMID:11920959, PMID:12826609, PMID:12909720, PMID:12917626, PMID:14584079, PMID:15037740, PMID:15161705, PMID:15850016, PMID:15925506, PMID:15977174, PMID:15982667, PMID:16312222, PMID:16494995, PMID:16508005, PMID:16736287, PMID:16861262, PMID:17015838, PMID:17390010, PMID:17401428, PMID:17541742, PMID:17572079, PMID:17606709, PMID:18208484, PMID:18307025, PMID:18453682, PMID:18511570, PMID:18555592, PMID:19012332, PMID:19101993, PMID:19147582, PMID:19171880, PMID:19336573, PMID:19468865, PMID:19556618, PMID:19681600, PMID:19850740, PMID:19913028, PMID:20028212, PMID:20118236, PMID:20127978, PMID:20128691, PMID:20234365, PMID:20407015, PMID:20505364, PMID:20506564, PMID:20522432, PMID:20805372, PMID:20972454, PMID:21059199, PMID:21159183, PMID:21232794, PMID:21305319, PMID:21319261, PMID:21343334, PMID:21356188, PMID:21519010, PMID:21626334, PMID:21674059, PMID:21761402, PMID:22090360, PMID:22186996, PMID:22672556, PMID:22710932, PMID:22844452, PMID:22887876, PMID:22923379, PMID:22983585, PMID:23031740, PMID:23161690, PMID:23165212, PMID:23175693, PMID:23259501, PMID:23315175, PMID:23630318, PMID:23894400, PMID:24033266, PMID:24256616, PMID:24381225, PMID:24384472, PMID:24395441, PMID:24487413, PMID:24573247, PMID:24641375, PMID:24702488, PMID:24728327, PMID:24766216, PMID:25293557, PMID:25503501, PMID:25584008, PMID:25584637, PMID:25619955, PMID:25741868, PMID:25787918, PMID:25896519, PMID:25952993, PMID:25980754, PMID:26014290, PMID:26022348, PMID:26230955, PMID:26270727, PMID:26467025, PMID:26554828, PMID:26556299, PMID:26585234, PMID:26619011, PMID:26659639, PMID:26787237, PMID:26845104, PMID:26878390, PMID:26911350, PMID:26976419, PMID:27022024, PMID:27077130, PMID:27189670, PMID:27276561, PMID:27463065, PMID:27493922, PMID:27533082, PMID:27616075, PMID:27622479, PMID:27680515, PMID:27895058, PMID:27959731, PMID:28135145, PMID:28279309, PMID:28369373, PMID:28472496, PMID:28492532, PMID:28802053, PMID:28861920, PMID:28915717, PMID:28975465, PMID:29070607, PMID:29126202, PMID:29324801, PMID:29489754, PMID:29753700, PMID:29979965, PMID:30128536, PMID:30216591, PMID:30224644, PMID:30297838, PMID:30306255, PMID:30311369, PMID:30352134, PMID:30450585, PMID:30720243 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
nephroblastoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A disease_progression ISO RGD PMID:11888090 RGD:2315560 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Amer1 APC membrane recruitment protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr  X:64,686,620...64,702,504
Ensembl chr  X:64,686,623...64,702,441
JBrowse link
G Apoc3 apolipoprotein C3 ISO protein:increased expression:serum RGD PMID:22160518 RGD:7207220 NCBI chr 8:50,529,318...50,531,498
Ensembl chr 8:50,529,318...50,531,498
JBrowse link
G Arid1a AT-rich interaction domain 1A ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 5:151,904,687...151,977,973
Ensembl chr 5:151,904,684...151,977,636
JBrowse link
G Asxl1 ASXL transcriptional regulator 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 3:148,832,231...148,902,356
Ensembl chr 3:148,837,814...148,900,452
JBrowse link
G Bcl2l1 Bcl2-like 1 disease_progression ISO RGD PMID:15717629 RGD:1643482 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810
JBrowse link
G Bcor BCL6 co-repressor ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr  X:11,570,155...11,692,022
Ensembl chr  X:11,648,989...11,691,099
JBrowse link
G Bcorl1 BCL6 co-repressor-like 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr  X:135,187,468...135,233,859
Ensembl chr  X:135,187,468...135,233,839
JBrowse link
G Bmp7 bone morphogenetic protein 7 IEP mRNA:decreased expression:kidney RGD PMID:9808158 RGD:2289034 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: Wilms Tumor ClinVar PMID:12068308, PMID:12198537, PMID:12447372, PMID:12460918, PMID:12460919, PMID:12619120, PMID:12644542, PMID:12670889, PMID:12794760, PMID:12960123, PMID:14513361, PMID:14602780, PMID:14679157, PMID:15001635, PMID:15035987, PMID:15126572, PMID:15181070, PMID:15342696, PMID:15356022, PMID:15386408, PMID:15687339, PMID:15998781, PMID:16015629, PMID:16174717, PMID:16187918, PMID:16772349, PMID:17374713, PMID:17488796, PMID:17785355, PMID:18398503, PMID:19001320, PMID:19010912, PMID:19018267, PMID:19238210, PMID:19404918, PMID:19537845, PMID:19561230, PMID:20008640, PMID:20350999, PMID:20413299, PMID:20619739, PMID:20630094, PMID:20818844, PMID:20823850, PMID:20857202, PMID:21107320, PMID:21107323, PMID:21129611, PMID:21156289, PMID:21163703, PMID:21426297, PMID:21483012, PMID:21502544, PMID:21639808, PMID:21641636, PMID:21683865, PMID:21975775, PMID:22038996, PMID:22048237, PMID:22113612, PMID:22180495, PMID:22281684, PMID:22351686, PMID:22356324, PMID:22389471, PMID:22448344, PMID:22536370, PMID:22586120, PMID:22608338, PMID:22649091, PMID:22663011, PMID:22735384, PMID:22743296, PMID:22773810, PMID:22805292, PMID:22972589, PMID:22997239, PMID:23020132, PMID:23031422, PMID:23251002, PMID:23302800, PMID:23325582, PMID:23470635, PMID:23524406, PMID:23549875, PMID:23614898, PMID:23685455, PMID:23812671, PMID:23833300, PMID:23845441, PMID:23918947, PMID:24107445, PMID:24112392, PMID:24163374, PMID:24388723, PMID:24508103, PMID:24512911, PMID:24576830, PMID:24583796, PMID:24586605, PMID:24594804, PMID:24670642, PMID:24717435, PMID:25024077, PMID:25037139, PMID:25079330, PMID:25157968, PMID:25265492, PMID:25265494, PMID:25370471, PMID:25399551, PMID:25950823, PMID:25989278, PMID:26619011, PMID:26678033, PMID:27404270, PMID:27480103, PMID:28854169, PMID:28891408, PMID:29925953, PMID:31779674, PMID:31891627 NCBI chr 4:67,389,331...67,520,549
Ensembl chr 4:67,396,192...67,520,356
JBrowse link
G Brca2 BRCA2, DNA repair associated susceptibility ISO DNA:deletion, point mutations: :886delGT, 4876G>T, IVS7+2T>G
ClinVar Annotator: match by term: Bilateral Wilms tumor
ClinVar Annotator: match by term: Wilms tumor, somatic
ClinVar Annotator: match by term: Wilms tumor 1
ClinVar
OMIM
PMID:2073695, PMID:8673090, PMID:9150172, PMID:9667259, PMID:9792861, PMID:10644434, PMID:10978364, PMID:11149425, PMID:11307153, PMID:11400546, PMID:11802209, PMID:12204006, PMID:12373604, PMID:14559878, PMID:14647210, PMID:14670928, PMID:14973102, PMID:15131399, PMID:15168169, PMID:15382066, PMID:15689453, PMID:15800311, PMID:16455195, PMID:16683254, PMID:16825431, PMID:16905680, PMID:16912212, PMID:17148771, PMID:17513806, PMID:17925560, PMID:18465347, PMID:18703817, PMID:19016756, PMID:19491284, PMID:19863560, PMID:20104584, PMID:20694749, PMID:20736950, PMID:21324516, PMID:21465317, PMID:22009639, PMID:22217648, PMID:22535016, PMID:22666503, PMID:22798144, PMID:22923021, PMID:23096105, PMID:23199084, PMID:23318356, PMID:23469205, PMID:23593081, PMID:23621881, PMID:23767878, PMID:24033266, PMID:24156927, PMID:24504028, PMID:24556621, PMID:24728189, PMID:24884479, PMID:24916970, PMID:25011685, PMID:25066507, PMID:25525159, PMID:25741868, PMID:25802882, PMID:25863477, PMID:26064523, PMID:26187060, PMID:26287763, PMID:26295337, PMID:26467025, PMID:26541979, PMID:26657402, PMID:26681312, PMID:26845104, PMID:27153395, PMID:27257965, PMID:27469594, PMID:27732944, PMID:27741520, PMID:27767231, PMID:27831900, PMID:28008555, PMID:28039656, PMID:28222693, PMID:28294317, PMID:28324225, PMID:28477318, PMID:28492532, PMID:28541631, PMID:28724667, PMID:29020732, PMID:29088781, PMID:29339979, PMID:29433453, PMID:29446198, PMID:29492181, PMID:29753700, PMID:29907814, PMID:30287823, PMID:30350268, PMID:30702160, PMID:15689453 RGD:2289049 NCBI chr12:503,660...544,754
Ensembl chr12:504,007...544,748
JBrowse link
G Ccnd2 cyclin D2 ISO RGD PMID:15797629 RGD:2289153 NCBI chr 4:159,674,885...159,697,207
Ensembl chr 4:159,674,885...159,697,207
JBrowse link
G Cd44 CD44 molecule (Indian blood group) ISO RGD PMID:12131349 RGD:2289361 NCBI chr 3:92,695,083...92,783,820
Ensembl chr 3:92,696,313...92,783,658
JBrowse link
G Cdk15 cyclin-dependent kinase 15 ISO mRNA:increased expression:kidney RGD PMID:12057921 RGD:2316755 NCBI chr 9:66,059,765...66,153,729
Ensembl chr 9:66,058,047...66,148,087
JBrowse link
G Cdk4 cyclin-dependent kinase 4 disease_progression ISO RGD PMID:15797629 RGD:2289153 NCBI chr 7:70,345,971...70,352,689
Ensembl chr 7:70,349,863...70,352,418
JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B disease_progression ISO RGD PMID:14760081 RGD:2293605 NCBI chr 4:168,689,043...168,694,159
Ensembl chr 4:168,689,163...168,693,964
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO protein:increased expression:kidney RGD PMID:17369505 RGD:2289679 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Cdkn2a_v1 cyclin-dependent kinase inhibitor 2A, variant 1 ISO protein:increased expression:kidney RGD PMID:17369505 RGD:2289679
G Chek2 checkpoint kinase 2 ISO ClinVar Annotator: match by term: Nephroblastoma ClinVar PMID:10617473, PMID:11719428, PMID:11967536, PMID:15492928, PMID:18759107, PMID:19030985, PMID:20722467, PMID:21244692, PMID:21876083, PMID:21956126, PMID:22006311, PMID:22058216, PMID:22058428, PMID:22520019, PMID:22691310, PMID:22811390, PMID:22994785, PMID:23109706, PMID:23329222, PMID:23409019, PMID:23415889, PMID:24723567, PMID:26822237 NCBI chr12:51,845,574...51,878,098
Ensembl chr12:51,845,796...51,877,624
JBrowse link
G Col6a3 collagen type VI alpha 3 chain ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 9:97,926,784...98,004,643
Ensembl chr 9:97,926,787...98,004,546
JBrowse link
G Ctnnb1 catenin beta 1 ISO protein:increased expression:kidney
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Wilms Tumor
DNA:mutations: :multiple
CTD
ClinVar
PMID:9065402, PMID:9065403, PMID:10027390, PMID:10435629, PMID:11351304, PMID:11930117, PMID:11950921, PMID:12124804, PMID:15133491, PMID:21237236, PMID:24788118, PMID:25157968, PMID:26619011, PMID:26822237, PMID:28825729, PMID:12890743, PMID:12239584 RGD:2289833, RGD:2289834 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Cxcr2 C-X-C motif chemokine receptor 2 ISO RGD PMID:17634442 RGD:7257700 NCBI chr 9:81,427,275...81,435,065
Ensembl chr 9:81,427,730...81,434,102
JBrowse link
G Dgcr8 DGCR8 microprocessor complex subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr11:86,852,682...86,885,233
Ensembl chr11:86,852,711...86,885,224
JBrowse link
G Dicer1 dicer 1 ribonuclease III ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 6:128,388,084...128,453,234
Ensembl chr 6:128,388,053...128,434,183
JBrowse link
G Dis3l2 DIS3-like 3'-5' exoribonuclease 2 ISO DNA:missense mutations, deletions:multiple (human) RGD PMID:22306653 RGD:11558020 NCBI chr 9:93,767,837...94,161,106
Ensembl chr 9:93,660,680...94,160,760
JBrowse link
G Drosha drosha ribonuclease III ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 2:62,887,267...63,000,307
Ensembl chr 2:62,887,267...62,999,572
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO protein:increased expression:kidney RGD PMID:16932912 RGD:2289932 NCBI chr10:86,367,596...86,391,728
Ensembl chr10:86,367,596...86,391,728
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 severity ISO RGD PMID:12560388 RGD:2289966 NCBI chr12:9,033,993...9,205,886
Ensembl chr12:9,034,308...9,205,905
JBrowse link
G Fzd6 frizzled class receptor 6 ISO ClinVar Annotator: match by term: Wilms Tumor ClinVar PMID:26822237 NCBI chr 7:77,898,329...77,931,034
Ensembl chr 7:77,899,322...77,931,029
JBrowse link
G Fzd7 frizzled class receptor 7 ISO mRNA:increased expression:kidney RGD PMID:12057921 RGD:2316755 NCBI chr 9:66,305,731...66,308,550
Ensembl chr 9:66,305,731...66,308,550
JBrowse link
G Glipr1 GLI pathogenesis-related 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18030365 NCBI chr 7:54,767,828...54,778,823
Ensembl chr 7:54,767,827...54,778,848
JBrowse link
G Gpc3 glypican 3 ISO ClinVar Annotator: match by term: Wilms tumor 1
ClinVar Annotator: match by OMIM:194070
OMIM
ClinVar
PMID:8589713, PMID:8958336, PMID:10402475, PMID:10814714, PMID:12085187, PMID:12713262, PMID:17603795, PMID:17850639, PMID:20683991, PMID:20950395, PMID:21362501, PMID:21434539, PMID:24033266, PMID:24169032, PMID:24214682, PMID:24459012, PMID:24728327, PMID:25741868, PMID:26467025, PMID:28492532, PMID:30311386 NCBI chr  X:139,579,268...139,947,093
Ensembl chr  X:139,579,268...139,916,883
JBrowse link
G Gpc4 glypican 4 ISO CTD Direct Evidence: marker/mechanism CTD NCBI chr  X:139,354,325...139,464,876
Ensembl chr  X:139,354,155...139,464,798
JBrowse link
G H19 H19, imprinted maternally expressed transcript (non-protein coding) susceptibility ISO associated with Beckwith-Wiedemann Syndrome;DNA:hypermethylation RGD PMID:11436121 RGD:2306181 NCBI chr 1:215,744,404...215,747,080 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha severity ISO protein:increased expression:kidney RGD PMID:17937859 RGD:2291911 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Igf1r insulin-like growth factor 1 receptor treatment ISO human cells in a mouse model
mRNA:increased expression:kidney (human)
RGD PMID:22529373, PMID:8390684, PMID:8390684 RGD:7242789, RGD:12904709, RGD:12904709 NCBI chr 1:128,924,921...129,213,816
Ensembl chr 1:128,924,966...129,206,516
JBrowse link
G Igf2 insulin-like growth factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:8252039 NCBI chr 1:215,828,102...215,839,081
Ensembl chr 1:215,828,102...215,846,911
JBrowse link
G Igf2r insulin-like growth factor 2 receptor ISO RGD PMID:9070652 RGD:7242956 NCBI chr 1:48,176,095...48,264,482
Ensembl chr 1:48,176,106...48,264,477
JBrowse link
G Jup junction plakoglobin disease_progression ISO RGD PMID:17633921 RGD:2301745 NCBI chr10:88,280,517...88,307,451
Ensembl chr10:88,279,632...88,307,412
JBrowse link
G Kdm4d lysine demethylase 4D ISO mRNA:increased expression:kidney (human) RGD PMID:24219278 RGD:9588525 NCBI chr 8:12,968,192...12,993,651
Ensembl chr 8:13,511,805...13,513,337
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase disease_progression ISO RGD PMID:19010635 RGD:12910726 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
G Lin28a lin-28 homolog A ISS OMIM:194070 MouseDO NCBI chr 5:152,230,343...152,247,873
Ensembl chr 5:152,230,343...152,247,332
JBrowse link
G Map3k4 mitogen activated protein kinase kinase kinase 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 1:48,625,714...48,711,642
Ensembl chr 1:48,625,743...48,711,642
JBrowse link
G Max MYC associated factor X ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 6:99,984,260...100,011,460
Ensembl chr 6:99,984,260...100,011,388
JBrowse link
G Med12 mediator complex subunit 12 ISO ClinVar Annotator: match by term: Wilms Tumor
ClinVar Annotator: match by term: Wilms tumor, somatic
ClinVar PMID:25741868, PMID:26822237 NCBI chr  X:71,174,653...71,197,812
Ensembl chr  X:71,174,699...71,197,812
JBrowse link
G Mllt1 MLLT1, super elongation complex subunit ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 9:10,110,389...10,155,305
Ensembl chr 9:10,110,389...10,155,302
JBrowse link
G Msh2 mutS homolog 2 ISO ClinVar Annotator: match by term: Wilms Tumor ClinVar PMID:25741868, PMID:28492532 NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932
JBrowse link
G Mthfr methylenetetrahydrofolate reductase susceptibility ISO DNA:transition:cds:g.677C>T (human) RGD PMID:19346876 RGD:6893546 NCBI chr 5:164,844,642...164,864,360
Ensembl chr 5:164,845,925...164,860,910
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor severity ISO protein:increased expression:kidney (mouse)
mRNA:decreased expression:tumor (human)
RGD PMID:21983638, PMID:18260125 RGD:7207786, RGD:7207840 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Mycn MYCN proto-oncogene, bHLH transcription factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 6:38,222,554...38,228,419
Ensembl chr 6:38,222,555...38,228,379
JBrowse link
G Nono non-POU domain containing, octamer-binding ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr  X:71,324,365...71,342,225
Ensembl chr  X:71,324,365...71,342,225
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO mRNA:increased expression:kidney RGD PMID:12165855 RGD:2299168 NCBI chr 1:162,768,156...162,883,356
Ensembl chr 1:162,768,156...162,883,355
JBrowse link
G Pax2 paired box 2 ISO
IEP
mRNA:increased expression:kidney RGD PMID:12057921, PMID:7937920 RGD:2316755, RGD:2316757 NCBI chr 1:264,493,579...264,585,073
Ensembl chr 1:264,504,591...264,583,329
JBrowse link
G Pcna proliferating cell nuclear antigen disease_progression ISO RGD PMID:11869017 RGD:2315007 NCBI chr 3:124,880,698...124,884,570
Ensembl chr 3:124,880,698...124,884,570
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 ISO protein:increased expression:kidney RGD PMID:16945639 RGD:2300206 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
G Rest RE1-silencing transcription factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:26551668 NCBI chr14:33,131,985...33,152,019
Ensembl chr14:33,134,511...33,164,141
JBrowse link
G Serpinf1 serpin family F member 1 ISO protein:decreased expression:kidney RGD PMID:16863836 RGD:2312354 NCBI chr10:62,241,750...62,254,145
Ensembl chr10:62,241,756...62,254,287
JBrowse link
G Six1 SIX homeobox 1 severity ISO DNA:missense mutation:cds:p.Q177R (human)
CTD Direct Evidence: marker/mechanism
protein:increased expression:kidney, blastema (human)
CTD PMID:28825729, PMID:25670083, PMID:22180226 RGD:11561953, RGD:11561963 NCBI chr 6:95,929,060...95,934,296
Ensembl chr 6:95,929,060...95,934,296
JBrowse link
G Six2 SIX homeobox 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 6:8,952,572...8,955,893
Ensembl chr 6:8,952,572...8,956,276
JBrowse link
G Slc2a1 solute carrier family 2 member 1 severity ISO RGD PMID:22483234 RGD:12879482 NCBI chr 5:138,154,677...138,182,897
Ensembl chr 5:138,154,673...138,182,897
JBrowse link
G Smad4 SMAD family member 4 ISO ClinVar Annotator: match by term: Wilms Tumor ClinVar PMID:25741868, PMID:28492532 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO protein:increased serine phosphorylation:kidney RGD PMID:16799645 RGD:2291893 NCBI chr 9:54,287,540...54,327,958
Ensembl chr 9:54,287,541...54,484,533
JBrowse link
G Stat3 signal transducer and activator of transcription 3 disease_progression ISO protein:increased expression:kidney RGD PMID:17937859 RGD:2291911 NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233
JBrowse link
G Terc telomerase RNA component disease_progression ISO RGD PMID:16172460 RGD:2291966 NCBI chr 2:116,432,723...116,433,110
Ensembl chr 2:116,432,691...116,433,110
JBrowse link
G Tert telomerase reverse transcriptase disease_progression ISO RGD PMID:16172460 RGD:2291966 NCBI chr 1:32,250,876...32,275,330
Ensembl chr 1:32,251,714...32,272,476
JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 ISO ClinVar Annotator: match by term: Wilms Tumor ClinVar PMID:26822237 NCBI chr 2:238,719,389...238,802,975
Ensembl chr 2:238,720,835...238,803,024
JBrowse link
G Timp4 TIMP metallopeptidase inhibitor 4 ISO RGD PMID:11466614 RGD:2290439 NCBI chr 4:147,156,948...147,163,467
Ensembl chr 4:147,156,948...147,163,467
JBrowse link
G Top2a DNA topoisomerase II alpha ISO mRNA:increased expression:kidney RGD PMID:12438255, PMID:16556665 RGD:2315132, RGD:2315131 NCBI chr10:86,901,467...86,930,947
Ensembl chr10:86,901,007...86,932,154
JBrowse link
G Tp53 tumor protein p53 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Tp73 tumor protein p73 ISO DNA:loss of heterozygosity:kidney RGD PMID:10760569 RGD:2291834 NCBI chr 5:171,355,876...171,415,354
Ensembl chr 5:171,355,876...171,415,354
JBrowse link
G Trim28 tripartite motif-containing 28 ISO ClinVar Annotator: match by term: Nephroblastoma ClinVar PMID:25741868, PMID:32699065 NCBI chr 1:65,544,369...65,551,043
Ensembl chr 1:65,544,373...65,551,043
JBrowse link
G Trip13 thyroid hormone receptor interactor 13 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28553959 NCBI chr 1:31,967,980...32,012,923
Ensembl chr 1:31,967,978...32,012,919
JBrowse link
G Vegfc vascular endothelial growth factor C disease_progression ISO RGD PMID:17257131 RGD:2315481 NCBI chr16:40,440,371...40,555,178
Ensembl chr16:40,440,207...40,555,576
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor IEP
ISO
protein:decreased expression:kidney
ClinVar Annotator: match by term: Wilms Tumor
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:8634692, PMID:8707293, PMID:8956040, PMID:9829911, PMID:10567493, PMID:10761708, PMID:11106358, PMID:11739384, PMID:11880179, PMID:12414898, PMID:19228690, PMID:19906784, PMID:20447124, PMID:22234250, PMID:23990664, PMID:23990666, PMID:24033266, PMID:25157968, PMID:25637381, PMID:25741868, PMID:28492532, PMID:28503092, PMID:29790589, PMID:11880179 RGD:625549 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
G Wif1 Wnt inhibitory factor 1 ISO mRNA:increased expression:kidney RGD PMID:16575872 RGD:2291870 NCBI chr 7:63,094,955...63,165,158
Ensembl chr 7:63,094,911...63,165,159
JBrowse link
G Wt1 WT1 transcription factor ISO DNA:point mutations:exon:1084C>T; 1297_1298insC, 1298_1299delCG,(human)
ClinVar Annotator: match by term: Wilms tumor 1
ClinVar Annotator: match by term: Wilms Tumor
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by OMIM:194070
ClinVar
CTD
OMIM
PMID:1654525, PMID:7795587, PMID:8388765, PMID:8975729, PMID:9090524, PMID:9108089, PMID:10571943, PMID:10603123, PMID:12471221, PMID:15150775, PMID:15266301, PMID:15483024, PMID:15591903, PMID:18559874, PMID:18591546, PMID:18688870, PMID:19171881, PMID:19221039, PMID:19494353, PMID:19536888, PMID:20368469, PMID:20413658, PMID:20435628, PMID:21508141, PMID:21851196, PMID:22703879, PMID:23117548, PMID:23349334, PMID:23515051, PMID:24033266, PMID:24728327, PMID:25110071, PMID:25451826, PMID:25741868, PMID:25932436, PMID:26358501, PMID:26467025, PMID:26725263, PMID:26822237, PMID:28492532, PMID:28825729, PMID:8381965, PMID:15118671, PMID:1316081 RGD:2315545, RGD:1331525, RGD:2315544 NCBI chr 3:95,133,221...95,180,574
Ensembl chr 3:95,133,713...95,180,564
JBrowse link
G Xpo5 exportin 5 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28825729 NCBI chr 9:17,125,201...17,163,170
Ensembl chr 9:17,125,201...17,163,170
JBrowse link
nonpapillary renal cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk1 calcium/calmodulin-dependent protein kinase I ISO ClinVar Annotator: match by term: Renal cell carcinoma, nonpapillary ClinVar NCBI chr 4:145,289,300...145,300,146
Ensembl chr 4:145,288,996...145,300,177
JBrowse link
G Flcn folliculin ISS
ISO
OMIM:144700
ClinVar Annotator: match by term: Renal cell carcinoma, nonpapillary
MouseDO
ClinVar
PMID:15805188, PMID:15852235, PMID:18234728, PMID:19457309, PMID:19802896, PMID:20618353, PMID:21937013, PMID:23050938, PMID:24393238, PMID:24728327, PMID:25594584, PMID:25741868, PMID:28492532, PMID:28558743 NCBI chr10:46,153,185...46,172,331
Ensembl chr10:46,153,188...46,172,309
JBrowse link
G Hnf1a HNF1 homeobox A ISS OMIM:144700 MouseDO NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Hnf1b HNF1 homeobox B ISS OMIM:144700 MouseDO NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase ISO
ISS
ClinVar Annotator: match by term: Renal cell carcinoma, nonpapillary
OMIM:144700
ClinVar
MouseDO
NCBI chr 4:145,282,828...145,289,367
Ensembl chr 4:145,282,797...145,289,326
JBrowse link
G Rnf139 ring finger protein 139 ISS OMIM:144700 MouseDO NCBI chr 7:98,770,840...98,782,025
Ensembl chr 7:98,770,840...98,782,025
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISS OMIM:144700 MouseDO NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
papillary renal cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma ClinVar PMID:25741868, PMID:28492532 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531
JBrowse link
G Araf A-Raf proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic ClinVar PMID:24569458, PMID:26619011 NCBI chr  X:1,369,534...1,391,603
Ensembl chr  X:1,379,194...1,390,873
JBrowse link
G Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:28492532 NCBI chr 4:45,358,574...45,414,177
Ensembl chr 4:45,358,574...45,414,177
JBrowse link
G Atm ATM serine/threonine kinase ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:10571946 NCBI chr 8:58,015,938...58,119,973
Ensembl chr 8:58,015,940...58,120,045
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic
ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1
ClinVar PMID:12068308, PMID:12198537, PMID:12447372, PMID:12460918, PMID:12460919, PMID:12619120, PMID:12644542, PMID:12670889, PMID:12794760, PMID:12960123, PMID:14513361, PMID:14602780, PMID:14679157, PMID:15001635, PMID:15035987, PMID:15126572, PMID:15181070, PMID:15342696, PMID:15356022, PMID:15386408, PMID:15687339, PMID:15998781, PMID:16015629, PMID:16174717, PMID:16187918, PMID:16772349, PMID:17374713, PMID:17488796, PMID:17785355, PMID:18398503, PMID:19001320, PMID:19010912, PMID:19018267, PMID:19238210, PMID:19404918, PMID:19537845, PMID:19561230, PMID:20008640, PMID:20350999, PMID:20413299, PMID:20619739, PMID:20630094, PMID:20818844, PMID:20823850, PMID:20857202, PMID:21107320, PMID:21107323, PMID:21129611, PMID:21156289, PMID:21163703, PMID:21426297, PMID:21483012, PMID:21502544, PMID:21639808, PMID:21641636, PMID:21683865, PMID:21975775, PMID:22038996, PMID:22048237, PMID:22113612, PMID:22180495, PMID:22281684, PMID:22351686, PMID:22356324, PMID:22389471, PMID:22448344, PMID:22536370, PMID:22586120, PMID:22608338, PMID:22649091, PMID:22663011, PMID:22735384, PMID:22743296, PMID:22773810, PMID:22805292, PMID:22972589, PMID:22997239, PMID:23020132, PMID:23031422, PMID:23251002, PMID:23302800, PMID:23325582, PMID:23470635, PMID:23524406, PMID:23549875, PMID:23614898, PMID:23685455, PMID:23812671, PMID:23833300, PMID:23845441, PMID:23918947, PMID:24033266, PMID:24107445, PMID:24112392, PMID:24163374, PMID:24388723, PMID:24446311, PMID:24508103, PMID:24512911, PMID:24576830, PMID:24583796, PMID:24586605, PMID:24594804, PMID:24670642, PMID:24717435, PMID:25024077, PMID:25037139, PMID:25079330, PMID:25157968, PMID:25265492, PMID:25265494, PMID:25370471, PMID:25399551, PMID:25950823, PMID:25989278, PMID:26619011, PMID:26678033, PMID:27404270, PMID:27480103, PMID:28854169, PMID:28891408, PMID:29925953, PMID:31779674, PMID:31891627 NCBI chr 4:67,389,331...67,520,549
Ensembl chr 4:67,396,192...67,520,356
JBrowse link
G Capza2 capping actin protein of muscle Z-line subunit alpha 2 ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:28492532 NCBI chr 4:44,936,290...44,972,270
Ensembl chr 4:44,936,290...44,972,267
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic ClinVar PMID:25741868, PMID:26619011 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Cftr CF transmembrane conductance regulator ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:28492532 NCBI chr 4:42,693,263...42,860,679
Ensembl chr 4:42,692,836...42,860,676
JBrowse link
G Ctnnb1 catenin beta 1 ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:26822237 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Eloc elongin C ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:26619011 NCBI chr 5:2,042,991...2,059,357
Ensembl chr 5:2,042,991...2,059,351
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic ClinVar PMID:18413839, PMID:22046346, PMID:23220880, PMID:25157968, PMID:26619011 NCBI chr10:86,367,596...86,391,728
Ensembl chr10:86,367,596...86,391,728
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic ClinVar PMID:26619011 NCBI chr 2:184,230,191...184,309,805
Ensembl chr 2:184,231,260...184,309,664
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic ClinVar PMID:8589699, PMID:8845844, PMID:9438390, PMID:9843049, PMID:10471491, PMID:11038465, PMID:11429702, PMID:11879084, PMID:15772091, PMID:17384684, PMID:19088846, PMID:19331127, PMID:19381019, PMID:19749790, PMID:20542753, PMID:21273588, PMID:22869148, PMID:23200862, PMID:24476948, PMID:25157968, PMID:25606676, PMID:25741868, PMID:26619011, PMID:28249712, PMID:28492532, PMID:30311386 NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
JBrowse link
G Hras HRas proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic
ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1
ClinVar PMID:11150980, PMID:12210337, PMID:14608654, PMID:16155195, PMID:16170316, PMID:16329078, PMID:16372351, PMID:16443854, PMID:16835863, PMID:16881968, PMID:16969868, PMID:17054105, PMID:17250658, PMID:17412879, PMID:17979197, PMID:18039947, PMID:18247425, PMID:18470943, PMID:18978862, PMID:19206176, PMID:19371735, PMID:19382114, PMID:19669404, PMID:20660566, PMID:20979192, PMID:21834037, PMID:21850009, PMID:22087699, PMID:22317973, PMID:22499344, PMID:22683711, PMID:22926243, PMID:23751039, PMID:24033266, PMID:24129065, PMID:24169525, PMID:24224811, PMID:25157968, PMID:25741868, PMID:25914166, PMID:26619011, PMID:27195699, PMID:27589201, PMID:28027064, PMID:28139825, PMID:28390077, PMID:28492532, PMID:29073591, PMID:29493581 NCBI chr 1:214,178,404...214,181,841
Ensembl chr 1:214,178,407...214,181,686
JBrowse link
G Lrrc56 leucine rich repeat containing 56 ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic
ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1
ClinVar PMID:11150980, PMID:12210337, PMID:14608654, PMID:16155195, PMID:16170316, PMID:16329078, PMID:16372351, PMID:16443854, PMID:16835863, PMID:16881968, PMID:16969868, PMID:17054105, PMID:17250658, PMID:17412879, PMID:17979197, PMID:18039947, PMID:18247425, PMID:18470943, PMID:18978862, PMID:19206176, PMID:19371735, PMID:19382114, PMID:19669404, PMID:20660566, PMID:20979192, PMID:21834037, PMID:21850009, PMID:22087699, PMID:22317973, PMID:22499344, PMID:22683711, PMID:22926243, PMID:23751039, PMID:24033266, PMID:24129065, PMID:24169525, PMID:24224811, PMID:25157968, PMID:25741868, PMID:25914166, PMID:26619011, PMID:27195699, PMID:27589201, PMID:28027064, PMID:28139825, PMID:28390077, PMID:28492532, PMID:29073591, PMID:29493581 NCBI chr 1:214,182,232...214,197,184
Ensembl chr 1:214,182,830...214,197,184
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar
OMIM
PMID:1104268, PMID:9140397, PMID:9326629, PMID:9563489, PMID:9731534, PMID:9826708, PMID:10327054, PMID:10417759, PMID:10433944, PMID:11042681, PMID:11354004, PMID:11750879, PMID:11927612, PMID:12920089, PMID:14559814, PMID:15371818, PMID:15592501, PMID:15735036, PMID:16189274, PMID:17088437, PMID:17483355, PMID:18564920, PMID:19318576, PMID:19723643, PMID:20126411, PMID:20139696, PMID:20670955, PMID:20949619, PMID:21904579, PMID:21970370, PMID:22703879, PMID:22717761, PMID:23213094, PMID:23806086, PMID:24033266, PMID:24061647, PMID:24088041, PMID:24121490, PMID:24658158, PMID:24728327, PMID:25157968, PMID:25605252, PMID:25636233, PMID:25637381, PMID:25736269, PMID:25741868, PMID:25859546, PMID:26173098, PMID:26467025, PMID:26700204, PMID:26718692, PMID:26887047, PMID:27153395, PMID:27666373, PMID:27696107, PMID:28294470, PMID:28476232, PMID:28492532, PMID:28603720, PMID:28619094 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G Mlh1 mutL homolog 1 ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma ClinVar PMID:25741868, PMID:28492532 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
G Msh2 mutS homolog 2 ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:18325052, PMID:21926548, PMID:24506336, PMID:24763289, PMID:25637381, PMID:25741868, PMID:26467025, PMID:26878173, PMID:26951660, PMID:28195393, PMID:28202063, PMID:28492532, PMID:28640387, PMID:29887214 NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic
ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1
ClinVar PMID:24631838, PMID:25741868, PMID:26018084, PMID:26619011, PMID:27159400 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2-like 2 ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:26619011 NCBI chr 3:62,497,568...62,525,146
Ensembl chr 3:62,497,571...62,524,996
JBrowse link
G Nras NRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:1654209, PMID:2278970, PMID:2674680, PMID:3122217, PMID:6587382, PMID:8120410, PMID:10821536, PMID:12460918, PMID:12727991, PMID:14508525, PMID:15899789, PMID:16273091, PMID:16291983, PMID:16434492, PMID:17699718, PMID:18390968, PMID:18633438, PMID:18668139, PMID:18948947, PMID:19075190, PMID:19657110, PMID:19880792, PMID:20130576, PMID:20149136, PMID:20179705, PMID:20406486, PMID:20619739, PMID:20736745, PMID:21107323, PMID:21305640, PMID:21576590, PMID:21729679, PMID:21829508, PMID:22407852, PMID:22499344, PMID:22718121, PMID:22761467, PMID:22773810, PMID:23076151, PMID:23392294, PMID:23400451, PMID:23414587, PMID:23515407, PMID:23538902, PMID:23569304, PMID:23614898, PMID:24006476, PMID:24033266, PMID:24148783, PMID:24370118, PMID:24671188, PMID:25157968, PMID:25348872, PMID:25695684, PMID:26619011, PMID:26821351, PMID:27050078, PMID:28492532, PMID:28780248 NCBI chr 2:205,553,119...205,563,716
Ensembl chr 2:205,553,163...205,560,791
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic
ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1
ClinVar PMID:15016963, PMID:15254419, PMID:15520168, PMID:15608678, PMID:15647370, PMID:15805248, PMID:16847462, PMID:16906227, PMID:16930767, PMID:17376864, PMID:17673550, PMID:18676830, PMID:18725974, PMID:19029981, PMID:19223544, PMID:19366826, PMID:19513541, PMID:19903786, PMID:20453058, PMID:20619739, PMID:21430269, PMID:21558396, PMID:21824802, PMID:22162582, PMID:22162589, PMID:22228622, PMID:22271473, PMID:22357840, PMID:22658544, PMID:22729222, PMID:22729223, PMID:22729224, PMID:23066039, PMID:23100325, PMID:23246288, PMID:23408298, PMID:23754335, PMID:23888070, PMID:24033266, PMID:24265155, PMID:24497998, PMID:24559322, PMID:24782230, PMID:25157968, PMID:25557259, PMID:25741868, PMID:26266975, PMID:26266985, PMID:26301495, PMID:26593112, PMID:26619011, PMID:26822237, PMID:26851524, PMID:27426476, PMID:27626068, PMID:27631024, PMID:27870750, PMID:28492532, PMID:28941273, PMID:29446767 NCBI chr 2:118,831,350...118,861,456
Ensembl chr 2:118,831,350...118,861,454
JBrowse link
G Prcc proline rich mitotic checkpoint control factor ISO OMIM NCBI chr 2:187,232,458...187,258,140
Ensembl chr 2:187,232,458...187,258,140
JBrowse link
G Pten phosphatase and tensin homolog ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:9467011, PMID:9915974, PMID:10866302, PMID:11504908, PMID:11875759, PMID:16773562, PMID:17526801, PMID:17942903, PMID:18767981, PMID:19457929, PMID:20085938, PMID:20300775, PMID:21659347, PMID:21822720, PMID:21824802, PMID:21828076, PMID:22266152, PMID:22320991, PMID:22327138, PMID:22595938, PMID:23335809, PMID:23399955, PMID:23470840, PMID:24778394, PMID:25157968, PMID:25527629, PMID:25741868, PMID:26619011, PMID:26798346, PMID:27477328, PMID:27535533, PMID:28475857, PMID:28492532, PMID:29359449, PMID:29706350 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Rheb Ras homolog, mTORC1 binding ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic ClinVar PMID:26619011 NCBI chr 4:6,827,429...6,873,384
Ensembl chr 4:6,827,429...6,873,383
JBrowse link
G Sdhb succinate dehydrogenase complex iron sulfur subunit B ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:18728283, PMID:19184535, PMID:19576851, PMID:22835832, PMID:24055113, PMID:24092654, PMID:25637381, PMID:25741868, PMID:26332594, PMID:28492532 NCBI chr 5:159,484,378...159,505,063
Ensembl chr 5:159,484,370...159,505,064
JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:26619011 NCBI chr 9:61,594,620...61,634,510
Ensembl chr 9:61,594,620...61,634,510
JBrowse link
G Sf3b2 splicing factor 3b, subunit 2 ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:26619011 NCBI chr 1:220,645,685...220,665,611
Ensembl chr 1:220,645,672...220,665,603
JBrowse link
G ST7 suppression of tumorigenicity 7 ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:28492532 NCBI chr 4:45,000,223...45,247,793
Ensembl chr 4:45,000,973...45,247,790
JBrowse link
G Tp53 tumor protein p53 ISO ClinVar Annotator: match by term: Papillary renal cell carcinoma, sporadic
ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1
ClinVar PMID:1349175, PMID:1565143, PMID:1565144, PMID:1644930, PMID:1737852, PMID:7651740, PMID:7707106, PMID:7732013, PMID:7887414, PMID:8023157, PMID:8080050, PMID:8118819, PMID:8242631, PMID:8401536, PMID:8633021, PMID:8718514, PMID:8829627, PMID:8869100, PMID:9096669, PMID:9242456, PMID:9290701, PMID:9546439, PMID:9572492, PMID:9627118, PMID:9635828, PMID:9662334, PMID:9667734, PMID:10064694, PMID:10366100, PMID:10432928, PMID:10589545, PMID:10753186, PMID:10761705, PMID:10864200, PMID:10922393, PMID:11370630, PMID:11429705, PMID:11793474, PMID:11896595, PMID:11920788, PMID:11920959, PMID:12826609, PMID:12909720, PMID:12917626, PMID:14559903, PMID:14584079, PMID:15037740, PMID:15161705, PMID:15850016, PMID:15925506, PMID:15977174, PMID:15982667, PMID:16312222, PMID:16494995, PMID:16508005, PMID:16736287, PMID:16861262, PMID:17015838, PMID:17390010, PMID:17401428, PMID:17541742, PMID:17572079, PMID:17606709, PMID:18208484, PMID:18307025, PMID:18453682, PMID:18511570, PMID:18555592, PMID:19012332, PMID:19101993, PMID:19147582, PMID:19171880, PMID:19336573, PMID:19468865, PMID:19556618, PMID:19681600, PMID:19850740, PMID:19913028, PMID:20028212, PMID:20118236, PMID:20127978, PMID:20128691, PMID:20234365, PMID:20308654, PMID:20407015, PMID:20505364, PMID:20506564, PMID:20522432, PMID:20805372, PMID:20972454, PMID:21056685, PMID:21059199, PMID:21159183, PMID:21232794, PMID:21305319, PMID:21319261, PMID:21343334, PMID:21356188, PMID:21483000, PMID:21514416, PMID:21519010, PMID:21626334, PMID:21674059, PMID:21761402, PMID:22090360, PMID:22186996, PMID:22265402, PMID:22672556, PMID:22710932, PMID:22844452, PMID:22887876, PMID:22923379, PMID:22983585, PMID:23031740, PMID:23161690, PMID:23165212, PMID:23175693, PMID:23259501, PMID:23315175, PMID:23630318, PMID:23894400, PMID:24033266, PMID:24256616, PMID:24381225, PMID:24384472, PMID:24395441, PMID:24487413, PMID:24573247, PMID:24641375, PMID:24702488, PMID:24728327, PMID:24766216, PMID:25293557, PMID:25503501, PMID:25584008, PMID:25584637, PMID:25619955, PMID:25741868, PMID:25787918, PMID:25896519, PMID:25945745, PMID:25952993, PMID:25980754, PMID:26014290, PMID:26022348, PMID:26230955, PMID:26270727, PMID:26425688, PMID:26467025, PMID:26554828, PMID:26556299, PMID:26585234, PMID:26619011, PMID:26659639, PMID:26787237, PMID:26845104, PMID:26878390, PMID:26911350, PMID:26976419, PMID:27022024, PMID:27077130, PMID:27189670, PMID:27276561, PMID:27463065, PMID:27493922, PMID:27533082, PMID:27616075, PMID:27622479, PMID:27680515, PMID:27895058, PMID:27959731, PMID:28135145, PMID:28279309, PMID:28369373, PMID:28472496, PMID:28476805, PMID:28492532, PMID:28724667, PMID:28802053, PMID:28861920, PMID:28915717, PMID:28975465, PMID:29070607, PMID:29126202, PMID:29324801, PMID:29489754, PMID:29753700, PMID:29979965, PMID:30128536, PMID:30216591, PMID:30224644, PMID:30297838, PMID:30306255, PMID:30311369, PMID:30352134, PMID:30450585, PMID:30720243 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:7660122, PMID:7728151, PMID:7784063, PMID:7987306, PMID:7987327, PMID:8270255, PMID:8522307, PMID:8592333, PMID:8707293, PMID:8730290, PMID:8956040, PMID:9156047, PMID:9452032, PMID:9829911, PMID:9829912, PMID:10567493, PMID:10900011, PMID:11309459, PMID:11921283, PMID:12000816, PMID:12114495, PMID:14722919, PMID:14973063, PMID:14987375, PMID:15300849, PMID:15574766, PMID:17102069, PMID:17350623, PMID:18446368, PMID:18836774, PMID:19030229, PMID:19252526, PMID:19270817, PMID:19464396, PMID:19602254, PMID:20660572, PMID:21362373, PMID:21715564, PMID:22799452, PMID:23512077, PMID:24206762, PMID:24301059, PMID:25119015, PMID:25157968, PMID:25371412, PMID:25563310, PMID:25720320, PMID:25741868, PMID:25867206, PMID:26822237, PMID:27527340, PMID:27539324, PMID:27617348, PMID:28492532, PMID:28944243, PMID:29616089, PMID:30042107 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
G Wnt2 Wnt family member 2 ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1 ClinVar PMID:28492532 NCBI chr 4:45,286,845...45,332,899
Ensembl chr 4:45,292,437...45,332,420
JBrowse link
Perlman syndrome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dis3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease ISO ClinVar Annotator: match by term: Renal hamartomas nephroblastomatosis and fetal gigantism ClinVar PMID:25741868 NCBI chr15:83,466,330...83,494,107
Ensembl chr15:83,466,428...83,494,423
JBrowse link
G Dis3l2 DIS3-like 3'-5' exoribonuclease 2 ISO ClinVar Annotator: match by term: Perlman syndrome
ClinVar Annotator: match by term: Renal hamartomas nephroblastomatosis and fetal gigantism
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by OMIM:267000
OMIM
ClinVar
CTD
PMID:6093533, PMID:10508986, PMID:16957732, PMID:22306653, PMID:23576526, PMID:23594738, PMID:23613427, PMID:24141620, PMID:25741868, PMID:28135719, PMID:28492532 NCBI chr 9:93,767,837...94,161,106
Ensembl chr 9:93,660,680...94,160,760
JBrowse link
renal carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fosl1 FOS like 1, AP-1 transcription factor subunit IEP mRNA:increased expression:kidney RGD PMID:9405228 RGD:2293758 NCBI chr 1:220,826,560...220,835,066
Ensembl chr 1:220,826,560...220,835,066
JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit IEP mRNA:increased expression:kidney RGD PMID:9405228 RGD:2293758 NCBI chr 6:25,598,936...25,616,995
Ensembl chr 6:25,598,936...25,616,995
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit IEP mRNA:increased expression:kidney RGD PMID:9405228 RGD:2293758 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit IEP mRNA:increased expression:kidney RGD PMID:9405228 RGD:2293758 NCBI chr19:26,092,972...26,094,756
Ensembl chr19:26,092,974...26,094,756
JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit IEP mRNA:increased expression:kidney RGD PMID:9405228 RGD:2293758 NCBI chr16:20,485,028...20,486,707
Ensembl chr16:20,485,029...20,486,707
JBrowse link
G Letmd1 LETM1 domain containing 1 ISO mRNA, protein:increased expression:kidney RGD PMID:12879013 RGD:2314918 NCBI chr 7:142,106,364...142,119,900
Ensembl chr 7:142,106,465...142,119,899
JBrowse link
G Mcph1 microcephalin 1 ISO protein:decreased expression:kidney (human) RGD PMID:25197360 RGD:9589037 NCBI chr16:75,904,087...76,110,624
Ensembl chr16:75,904,006...76,110,553
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO ClinVar Annotator: match by term: Kidney Carcinoma ClinVar PMID:9140397, PMID:9563489, PMID:9731534, PMID:9826708, PMID:10327054, PMID:11750879, PMID:17483355, PMID:18829470, PMID:23213094, PMID:23610116, PMID:24121490, PMID:25157968, PMID:28492532 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G Msh2 mutS homolog 2 ISO ClinVar Annotator: match by term: Renal carcinoma ClinVar PMID:18325052, PMID:21926548, PMID:24506336, PMID:24763289, PMID:25637381, PMID:25741868, PMID:26467025, PMID:26878173, PMID:26951660, PMID:28195393, PMID:28202063, PMID:28492532, PMID:28640387, PMID:29887214 NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO ClinVar Annotator: match by term: Kidney Carcinoma
ClinVar Annotator: match by term: Renal carcinoma
ClinVar PMID:24622468, PMID:24631838, PMID:25741868, PMID:26018084, PMID:26619011, PMID:27159400 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Nras NRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Renal carcinoma ClinVar PMID:1654209, PMID:2278970, PMID:2674680, PMID:3122217, PMID:6587382, PMID:8120410, PMID:10821536, PMID:12460918, PMID:12727991, PMID:14508525, PMID:15899789, PMID:16273091, PMID:16291983, PMID:16434492, PMID:17699718, PMID:18390968, PMID:18633438, PMID:18668139, PMID:18948947, PMID:19075190, PMID:19657110, PMID:19880792, PMID:20130576, PMID:20149136, PMID:20179705, PMID:20406486, PMID:20619739, PMID:20736745, PMID:21107323, PMID:21305640, PMID:21576590, PMID:21729679, PMID:21829508, PMID:22407852, PMID:22499344, PMID:22718121, PMID:22761467, PMID:22773810, PMID:23076151, PMID:23392294, PMID:23400451, PMID:23414587, PMID:23515407, PMID:23538902, PMID:23569304, PMID:23614898, PMID:24006476, PMID:24033266, PMID:24148783, PMID:24370118, PMID:24671188, PMID:25157968, PMID:25348872, PMID:25695684, PMID:26619011, PMID:26821351, PMID:27050078, PMID:28492532, PMID:28780248 NCBI chr 2:205,553,119...205,563,716
Ensembl chr 2:205,553,163...205,560,791
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha ISO ClinVar Annotator: match by term: Renal carcinoma ClinVar PMID:15016963, PMID:15254419, PMID:15520168, PMID:15608678, PMID:15647370, PMID:15805248, PMID:16906227, PMID:16930767, PMID:17376864, PMID:17673550, PMID:18676830, PMID:18725974, PMID:19029981, PMID:19223544, PMID:19366826, PMID:19513541, PMID:19903786, PMID:20453058, PMID:20619739, PMID:21430269, PMID:21558396, PMID:21824802, PMID:22162582, PMID:22162589, PMID:22271473, PMID:22658544, PMID:22729222, PMID:22729223, PMID:22729224, PMID:23066039, PMID:23100325, PMID:23408298, PMID:23888070, PMID:24033266, PMID:24265155, PMID:24782230, PMID:25157968, PMID:25741868, PMID:26266975, PMID:26266985, PMID:26619011, PMID:26822237, PMID:27626068, PMID:27631024, PMID:28492532, PMID:29446767 NCBI chr 2:118,831,350...118,861,456
Ensembl chr 2:118,831,350...118,861,454
JBrowse link
G Pten phosphatase and tensin homolog ISO ClinVar Annotator: match by term: Renal carcinoma ClinVar PMID:9467011, PMID:9915974, PMID:10866302, PMID:11504908, PMID:11875759, PMID:16773562, PMID:17526801, PMID:17942903, PMID:18767981, PMID:19457929, PMID:20085938, PMID:20300775, PMID:21659347, PMID:21822720, PMID:21824802, PMID:21828076, PMID:22266152, PMID:22320991, PMID:22327138, PMID:22595938, PMID:23335809, PMID:23399955, PMID:23470840, PMID:24778394, PMID:25157968, PMID:25527629, PMID:25741868, PMID:26619011, PMID:26798346, PMID:27477328, PMID:27535533, PMID:28475857, PMID:28492532, PMID:29359449, PMID:29706350 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Sf3b2 splicing factor 3b, subunit 2 ISO ClinVar Annotator: match by term: Renal carcinoma ClinVar PMID:26619011 NCBI chr 1:220,645,685...220,665,611
Ensembl chr 1:220,645,672...220,665,603
JBrowse link
G Tp53 tumor protein p53 ISO ClinVar Annotator: match by term: Renal carcinoma ClinVar PMID:1349175, PMID:1565143, PMID:1565144, PMID:1644930, PMID:1737852, PMID:7651740, PMID:7707106, PMID:7732013, PMID:7887414, PMID:8023157, PMID:8080050, PMID:8118819, PMID:8401536, PMID:8633021, PMID:8718514, PMID:8829627, PMID:8869100, PMID:9096669, PMID:9242456, PMID:9290701, PMID:9546439, PMID:9572492, PMID:9635828, PMID:9662334, PMID:9667734, PMID:10064694, PMID:10366100, PMID:10432928, PMID:10589545, PMID:10753186, PMID:10761705, PMID:10864200, PMID:10922393, PMID:11370630, PMID:11429705, PMID:11793474, PMID:11896595, PMID:11920788, PMID:11920959, PMID:12826609, PMID:12909720, PMID:12917626, PMID:14584079, PMID:15037740, PMID:15161705, PMID:15850016, PMID:15925506, PMID:15977174, PMID:15982667, PMID:16312222, PMID:16494995, PMID:16508005, PMID:16736287, PMID:16861262, PMID:17015838, PMID:17390010, PMID:17401428, PMID:17541742, PMID:17572079, PMID:17606709, PMID:18208484, PMID:18307025, PMID:18453682, PMID:18511570, PMID:18555592, PMID:19012332, PMID:19101993, PMID:19147582, PMID:19171880, PMID:19336573, PMID:19468865, PMID:19556618, PMID:19681600, PMID:19850740, PMID:19913028, PMID:20028212, PMID:20118236, PMID:20127978, PMID:20128691, PMID:20234365, PMID:20407015, PMID:20505364, PMID:20506564, PMID:20522432, PMID:20805372, PMID:20972454, PMID:21059199, PMID:21159183, PMID:21232794, PMID:21305319, PMID:21319261, PMID:21343334, PMID:21356188, PMID:21519010, PMID:21626334, PMID:21674059, PMID:21761402, PMID:22090360, PMID:22186996, PMID:22672556, PMID:22710932, PMID:22844452, PMID:22887876, PMID:22923379, PMID:22983585, PMID:23031740, PMID:23161690, PMID:23165212, PMID:23175693, PMID:23259501, PMID:23315175, PMID:23630318, PMID:23894400, PMID:24033266, PMID:24256616, PMID:24381225, PMID:24384472, PMID:24395441, PMID:24487413, PMID:24573247, PMID:24641375, PMID:24702488, PMID:24728327, PMID:24766216, PMID:25293557, PMID:25503501, PMID:25584008, PMID:25584637, PMID:25619955, PMID:25741868, PMID:25787918, PMID:25896519, PMID:25952993, PMID:25980754, PMID:26014290, PMID:26022348, PMID:26230955, PMID:26270727, PMID:26467025, PMID:26554828, PMID:26556299, PMID:26585234, PMID:26619011, PMID:26659639, PMID:26787237, PMID:26845104, PMID:26878390, PMID:26911350, PMID:26976419, PMID:27022024, PMID:27077130, PMID:27189670, PMID:27276561, PMID:27463065, PMID:27493922, PMID:27533082, PMID:27616075, PMID:27622479, PMID:27680515, PMID:27895058, PMID:27959731, PMID:28135145, PMID:28279309, PMID:28369373, PMID:28472496, PMID:28492532, PMID:28802053, PMID:28861920, PMID:28915717, PMID:28975465, PMID:29070607, PMID:29126202, PMID:29324801, PMID:29489754, PMID:29753700, PMID:29979965, PMID:30128536, PMID:30216591, PMID:30224644, PMID:30297838, PMID:30306255, PMID:30311369, PMID:30352134, PMID:30450585, PMID:30720243 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
renal cell carcinoma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A disease_progression ISO DNA:polymorphism: :3435C>T (human) RGD PMID:17177989, PMID:12089380 RGD:2315557, RGD:2315559 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Abcg2 ATP binding cassette subfamily G member 2 susceptibility ISO DNA:polymorphism: :p.Q141K (human) RGD PMID:15906349 RGD:2315569 NCBI chr 4:88,765,441...88,890,268
Ensembl chr 4:88,832,178...88,890,621
JBrowse link
G Ache acetylcholinesterase ISO CTD Direct Evidence: marker/mechanism CTD PMID:18482720 NCBI chr12:22,472,358...22,477,052
Ensembl chr12:22,472,358...22,478,753
JBrowse link
G Acy1 aminoacylase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 8:115,134,792...115,140,171
Ensembl chr 8:115,134,765...115,140,080
JBrowse link
G Adgrb1 adhesion G protein-coupled receptor B1 severity ISO RGD PMID:21511296 RGD:13831349 NCBI chr 7:115,766,484...115,828,514 JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing ISO CTD Direct Evidence: marker/mechanism CTD PMID:29723618 NCBI chr11:81,330,845...81,344,488
Ensembl chr11:81,330,293...81,344,488
JBrowse link
G Afp alpha-fetoprotein ISO RGD PMID:1714107 RGD:2292042 NCBI chr14:19,141,755...19,159,919
Ensembl chr14:19,141,755...19,159,923
JBrowse link
G Agtr1a angiotensin II receptor, type 1a severity ISO protein:increased expression:kidney RGD PMID:21102591 RGD:6903280 NCBI chr17:35,907,102...35,958,136
Ensembl chr17:35,907,108...35,958,077
JBrowse link
G Agtr2 angiotensin II receptor, type 2 disease_progression ISO protein:increased expression:kidney RGD PMID:21102591 RGD:6903280 NCBI chr  X:119,389,480...119,393,845
Ensembl chr  X:119,390,013...119,393,842
JBrowse link
G Ahnak AHNAK nucleoprotein ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 1:225,184,883...225,429,638
Ensembl chr 1:225,184,939...225,215,015
JBrowse link
G Akap13 A-kinase anchoring protein 13 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 1:137,089,558...137,315,272
Ensembl chr 1:137,014,272...137,315,272
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO protein:increased serine phosphorylation:kidney RGD PMID:17681738 RGD:1643331 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Akt3 AKT serine/threonine kinase 3 susceptibility ISO DNA:missense mutation:exon, intron:multiple RGD PMID:23378641 RGD:13503319 NCBI chr13:95,076,308...95,348,913
Ensembl chr13:95,081,390...95,348,913
JBrowse link
G Alad aminolevulinate dehydratase ISO CTD Direct Evidence: marker/mechanism CTD PMID:21799727 NCBI chr 5:78,368,867...78,379,206
Ensembl chr 5:78,368,867...78,379,346
JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 1:238,222,689...238,264,381
Ensembl chr 1:238,222,521...238,264,330
JBrowse link
G Alk ALK receptor tyrosine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:22743654 NCBI chr 6:22,696,415...23,203,791
Ensembl chr 6:22,696,397...23,203,775
JBrowse link
G Alox12 arachidonate 12-lipoxygenase, 12S type ISO protein:increased expression:kidney RGD PMID:14654968 RGD:2315610 NCBI chr10:56,851,734...56,864,049
Ensembl chr10:56,851,734...56,864,005
JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type ISO CTD Direct Evidence: marker/mechanism CTD PMID:30258081 NCBI chr10:55,744,646...55,756,524
Ensembl chr10:55,744,588...55,756,566
JBrowse link
G Alox5 arachidonate 5-lipoxygenase ISO CTD Direct Evidence: marker/mechanism CTD PMID:30258081 NCBI chr 4:148,398,004...148,446,308
Ensembl chr 4:148,398,892...148,446,303
JBrowse link
G Amacr alpha-methylacyl-CoA racemase ISO RGD PMID:14707866 RGD:2315633 NCBI chr 2:60,949,276...60,961,342
Ensembl chr 2:60,949,256...60,961,326
JBrowse link
G Ang angiogenin ISO protein:increased expression:serum RGD PMID:18808740 RGD:2325699 NCBI chr15:28,022,926...28,028,636 JBrowse link
G Angpt1 angiopoietin 1 severity ISO mRNA:altered expression:kidney RGD PMID:17505508 RGD:1643335 NCBI chr 7:81,338,327...81,592,459
Ensembl chr 7:81,342,280...81,592,206
JBrowse link
G Anxa1 annexin A1 IEP RGD PMID:14587099 RGD:7421570 NCBI chr 1:237,893,983...237,910,002
Ensembl chr 1:237,893,966...237,910,012
JBrowse link
G Anxa2 annexin A2 IEP RGD PMID:14587099 RGD:7421570 NCBI chr 8:75,687,134...75,723,589
Ensembl chr 8:75,687,100...75,723,594
JBrowse link
G Anxa4 annexin A4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 4:118,538,775...118,595,591
Ensembl chr 4:118,538,777...118,595,580
JBrowse link
G Ap5m1 adaptor related protein complex 5 subunit mu 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr15:25,933,483...25,955,745
Ensembl chr15:25,933,483...25,955,745
JBrowse link
G Apaf1 apoptotic peptidase activating factor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17133271 NCBI chr 7:31,699,309...31,784,192
Ensembl chr 7:31,699,885...31,784,192
JBrowse link
G Apc APC regulator of WNT signaling pathway onset
disease_progression
severity
ISO DNA,protein:LOH,decreased expression: :
DNA:LOH: :
RGD PMID:16116480, PMID:10426194, PMID:15203750 RGD:7242056, RGD:7242060, RGD:7242059 NCBI chr18:27,011,710...27,106,323
Ensembl chr18:27,047,382...27,105,531
JBrowse link
G Aprt adenine phosphoribosyl transferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr19:55,387,288...55,389,256
Ensembl chr19:55,387,288...55,389,256
JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator treatment ISO DNA:missense mutation: :pF446L (human) RGD PMID:27595394 RGD:13503335 NCBI chr 2:196,594,178...196,651,486
Ensembl chr 2:196,594,303...196,651,179
JBrowse link
G Asb15 ankyrin repeat and SOCS box containing 15 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 4:51,598,815...51,642,276
Ensembl chr 4:51,614,676...51,644,492
JBrowse link
G Atp5mc2 ATP synthase membrane subunit c locus 2 ISO DNA:hypermethylation:promoter RGD PMID:21132003 RGD:14696812 NCBI chr 7:144,264,207...144,272,578
Ensembl chr 7:144,264,199...144,272,578
JBrowse link
G Aurka aurora kinase A ISO mRNA, protein:increased expression:kidney RGD PMID:17349527 RGD:1643346 NCBI chr 3:170,364,177...170,380,278
Ensembl chr 3:170,364,181...170,378,210
JBrowse link
G Bad BCL2-associated agonist of cell death ISO RGD PMID:15851405 RGD:2292677 NCBI chr 1:222,198,516...222,207,459
Ensembl chr 1:222,198,534...222,207,453
JBrowse link
G Bak1 BCL2-antagonist/killer 1 severity ISO RGD PMID:9894249 RGD:2315703 NCBI chr20:5,609,620...5,618,899
Ensembl chr20:5,609,625...5,618,260
JBrowse link
G Bap1 Brca1 associated protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691, PMID:22683710, PMID:23797736, PMID:25231345 NCBI chr16:7,336,685...7,345,511
Ensembl chr16:7,336,685...7,345,511
JBrowse link
G Bche butyrylcholinesterase ISO CTD Direct Evidence: marker/mechanism CTD PMID:18482720 NCBI chr 2:171,104,476...171,196,186
Ensembl chr 2:171,100,140...171,196,395
JBrowse link
G Bcl2 BCL2, apoptosis regulator disease_progression ISO RGD PMID:17482919, PMID:18283311 RGD:2293019, RGD:2298896 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Bcl2l1 Bcl2-like 1 ISO RGD PMID:12025227 RGD:1643483 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810
JBrowse link
G Bik BCL2-interacting killer ISO protein:decreased expression:kidney RGD PMID:16322756 RGD:14394818 NCBI chr 7:124,390,924...124,410,449
Ensembl chr 7:124,391,432...124,410,447
JBrowse link
G Birc2 baculoviral IAP repeat-containing 2 disease_progression ISO mRNA:altered expression:kidney RGD PMID:17154176 RGD:1643526 NCBI chr 8:6,014,014...6,036,668
Ensembl chr 8:6,013,207...6,034,142
JBrowse link
G Birc3 baculoviral IAP repeat-containing 3 ISO mRNA:altered expression:kidney RGD PMID:17154176 RGD:1643526 NCBI chr 8:6,048,590...6,076,828
Ensembl chr 8:6,048,969...6,076,598
JBrowse link
G Birc5 baculoviral IAP repeat-containing 5 disease_progression ISO mRNA:splice variant
CTD Direct Evidence: therapeutic
protein:increased expression:kidney
CTD PMID:16188142, PMID:12115583, PMID:17363528 RGD:2293108, RGD:2293102 NCBI chr10:106,856,097...106,864,419
Ensembl chr10:106,856,097...106,864,413
JBrowse link
G Birc7 baculoviral IAP repeat-containing 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17437058, PMID:25401301 NCBI chr 3:176,438,335...176,443,864
Ensembl chr 3:176,439,199...176,443,195
JBrowse link
G Bmp4 bone morphogenetic protein 4 severity ISO RGD PMID:17644140 RGD:1643589 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Bmp6 bone morphogenetic protein 6 ISO mRNA,protein:increased expression:kidney RGD PMID:20016212 RGD:7242419 NCBI chr17:26,955,142...27,112,820
Ensembl chr17:26,955,142...27,112,820
JBrowse link
G Bmp7 bone morphogenetic protein 7 disease_progression ISO RGD PMID:17644140 RGD:1643589 NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
JBrowse link
G Bsg basigin (Ok blood group) disease_progression ISO protein:increased expression:kidney RGD PMID:17021824 RGD:2289052 NCBI chr 7:12,875,536...12,882,753
Ensembl chr 7:12,875,537...12,882,753
JBrowse link
G Btg2 BTG anti-proliferation factor 2 ISO mRNA:decreased expression:kidney RGD PMID:14996721 RGD:2289069 NCBI chr13:50,913,185...50,916,944
Ensembl chr13:50,913,180...50,916,982
JBrowse link
G Btg3 BTG anti-proliferation factor 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:19221000 NCBI chr11:16,873,642...16,889,100
Ensembl chr11:16,873,646...16,889,201
JBrowse link
G C4a complement C4A disease_progression ISO RGD PMID:19150565 RGD:5688259 NCBI chr20:2,651,599...2,678,183
Ensembl chr20:2,651,599...2,678,141
JBrowse link
G C4b complement C4B (Chido blood group) disease_progression ISO RGD PMID:19150565 RGD:5688259 NCBI chr20:4,302,344...4,316,752
Ensembl chr20:4,302,344...4,316,715
JBrowse link
G Ca9 carbonic anhydrase 9 disease_progression ISO DNA, mRNA:hypomethylation, increased expression:promoter, kidney
protein:increased expression:serum, urine
RGD PMID:11506497, PMID:12966427, PMID:18464292, PMID:12883698 RGD:2293201, RGD:2293198, RGD:2293191, RGD:2293199 NCBI chr 5:59,008,277...59,015,535
Ensembl chr 5:59,008,933...59,015,528
JBrowse link
G Capg capping actin protein, gelsolin like ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 4:100,395,693...100,419,447
Ensembl chr 4:100,407,658...100,419,446
JBrowse link
G Card11 caspase recruitment domain family, member 11 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr12:15,700,600...15,844,512
Ensembl chr12:15,700,825...15,844,512
JBrowse link
G Casp2 caspase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20208132 NCBI chr 4:71,652,358...71,670,228
Ensembl chr 4:71,652,354...71,670,239
JBrowse link
G Casp3 caspase 3 ISO RGD PMID:17513560 RGD:2293308 NCBI chr16:48,845,011...48,863,249
Ensembl chr16:48,845,012...48,863,204
JBrowse link
G Cav1 caveolin 1 disease_progression ISO protein:increased expression:kidney RGD PMID:15247769 RGD:2289107 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Ccnb1 cyclin B1 disease_progression ISO protein:increased expression:kidney RGD PMID:16557593 RGD:2315941 NCBI chr 2:30,782,133...30,791,106
Ensembl chr 2:30,783,915...30,791,221
JBrowse link
G Ccnd1 cyclin D1 ISO DNA:polymorphism RGD PMID:15538282, PMID:17924468 RGD:2289130, RGD:2289127 NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325
JBrowse link
G Ccnd3 cyclin D3 disease_progression ISO RGD PMID:18679818 RGD:2316007 NCBI chr 9:15,404,816...15,410,905
Ensembl chr 9:15,404,822...15,410,943
JBrowse link
G Ccne1 cyclin E1 ISO mRNA, protein:increased expression:kidney RGD PMID:17726548 RGD:2289228 NCBI chr 1:94,485,830...94,495,112
Ensembl chr 1:94,485,832...94,494,980
JBrowse link
G Cd40 CD40 molecule treatment ISO RGD PMID:15282531, PMID:12594303, PMID:20426873 RGD:7248440, RGD:11522744, RGD:7248724 NCBI chr 3:161,519,789...161,534,943
Ensembl chr 3:161,519,743...161,534,704
JBrowse link
G Cd44 CD44 molecule (Indian blood group) disease_progression
severity
ISO protein:increased expression:kidney RGD PMID:12833185, PMID:17284111 RGD:2289360, RGD:2289351 NCBI chr 3:92,695,083...92,783,820
Ensembl chr 3:92,696,313...92,783,658
JBrowse link
G Cd46 CD46 molecule ISO RGD PMID:10744069 RGD:2293550 NCBI chr13:113,786,525...113,818,741
Ensembl chr13:113,787,349...113,817,995
JBrowse link
G Cdc14b cell division cycle 14B severity ISO mRNA:decreased expression:kidney: RGD PMID:24619757 RGD:10059341 NCBI chr17:1,709,703...1,797,732
Ensembl chr17:1,703,943...1,797,750
JBrowse link
G Cdh1 cadherin 1 disease_progression
onset
ISO protein:decreased expression, altered localization:kidney, nucleus
DNA:LOH: :
RGD PMID:17906660, PMID:15203750 RGD:2289489, RGD:7242059 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Cdk2 cyclin dependent kinase 2 ISO RGD PMID:16740772 RGD:2293561 NCBI chr 7:3,124,953...3,132,533
Ensembl chr 7:3,124,954...3,132,457
JBrowse link
G Cdk4 cyclin-dependent kinase 4 ISO protein:increased expression:kidney RGD PMID:15991006 RGD:2293579 NCBI chr 7:70,345,971...70,352,689
Ensembl chr 7:70,349,863...70,352,418
JBrowse link
G Cdkn1b cyclin-dependent kinase inhibitor 1B disease_progression ISO protein:decreased expression:kidney
mRNA, protein:increased expression:kidney
RGD PMID:17924468, PMID:18425369, PMID:18495610 RGD:2289127, RGD:2293590, RGD:2293589 NCBI chr 4:168,689,043...168,694,159
Ensembl chr 4:168,689,163...168,693,964
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A IAGP
ISO
DNA:gene instability
DNA:deletion
DNA, protein:hypermethylation, increased expression:promoter, kidney
RGD PMID:11839561, PMID:17201148, PMID:15232742 RGD:1298747, RGD:2289680, RGD:2289699 NCBI chr 5:107,823,323...107,832,405
Ensembl chr 5:107,823,330...107,841,175
JBrowse link
G Cdkn2a_v1 cyclin-dependent kinase inhibitor 2A, variant 1 ISO DNA:deletion
DNA:hypermethylation:promoter
RGD PMID:17201148, PMID:15232742 RGD:2289680, RGD:2289699
G Cdkn2a_v2 cyclin-dependent kinase inhibitor 2A, variant 2 ISO DNA, protein:hypermethylation, increased expression:promoter, kidney
DNA:deletion
RGD PMID:15232742, PMID:17201148 RGD:2289699, RGD:2289680
G Cdkn2b cyclin-dependent kinase inhibitor 2B IAGP DNA:loss of heterozygosity, deletion RGD PMID:10391689 RGD:7248758 NCBI chr 5:107,834,353...107,857,428
Ensembl chr 5:107,845,951...107,858,104
JBrowse link
G Cnn2 calponin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 7:12,782,459...12,787,977
Ensembl chr 7:12,782,491...12,787,750
JBrowse link
G Comt catechol-O-methyltransferase susceptibility ISO DNA:polymorphism:exon RGD PMID:17220335 RGD:2289716 NCBI chr11:86,715,981...86,735,630
Ensembl chr11:86,715,981...86,735,622
JBrowse link
G Cpq carboxypeptidase Q ISO CTD Direct Evidence: marker/mechanism CTD PMID:25401301 NCBI chr 7:71,709,174...72,167,413
Ensembl chr 7:71,709,157...72,167,417
JBrowse link
G Crabp1 cellular retinoic acid binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:16254461 NCBI chr 8:59,344,097...59,352,135
Ensembl chr 8:59,344,083...59,352,132
JBrowse link
G Cradd CASP2 and RIPK1 domain containing adaptor with death domain ISO CTD Direct Evidence: marker/mechanism CTD PMID:20208132 NCBI chr 7:36,395,665...36,408,588
Ensembl chr 7:36,395,665...36,408,588
JBrowse link
G Crp C-reactive protein disease_progression ISO RGD PMID:22958305 RGD:6904212 NCBI chr13:91,080,448...91,081,358
Ensembl chr13:91,054,974...91,093,713
JBrowse link
G Cryab crystallin, alpha B ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 8:55,178,543...55,182,546
Ensembl chr 8:55,178,289...55,182,545
JBrowse link
G Csf1r colony stimulating factor 1 receptor ISO mRNA:increased expression:kidney RGD PMID:18592004, PMID:22052465 RGD:2299092, RGD:7257566 NCBI chr18:56,414,493...56,458,300
Ensembl chr18:56,414,488...56,458,300
JBrowse link
G Csmd3 CUB and Sushi multiple domains 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691, PMID:23797736 NCBI chr 7:86,695,703...88,072,106
Ensembl chr 7:86,673,993...88,071,472
JBrowse link
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 ISO DNA:SNPs:exons:rs3087243, rs231775 (human) RGD PMID:17678726 RGD:7204723 NCBI chr 9:67,699,397...67,706,068
Ensembl chr 9:67,699,379...67,706,065
JBrowse link
G Ctnna1 catenin alpha 1 disease_progression ISO protein:decreased expression:kidney RGD PMID:9355975 RGD:2289799 NCBI chr18:27,923,229...28,055,972
Ensembl chr18:27,923,572...28,055,960
JBrowse link
G Ctnnb1 catenin beta 1 disease_progression ISO protein:increased expression:kidney RGD PMID:11831984, PMID:15330191 RGD:2289835, RGD:2289794 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ctsb cathepsin B ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr15:46,316,741...46,337,613
Ensembl chr15:46,316,741...46,337,612
JBrowse link
G Ctsd cathepsin D ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 1:215,541,570...215,553,446
Ensembl chr 1:215,541,542...215,553,451
JBrowse link
G Cul7 cullin 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 9:16,629,491...16,643,527
Ensembl chr 9:16,629,401...16,643,182
JBrowse link
G Cxcr2 C-X-C motif chemokine receptor 2 ISO RGD PMID:16210641 RGD:7257682 NCBI chr 9:81,427,275...81,435,065
Ensembl chr 9:81,427,730...81,434,102
JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 no_association ISO
IEP
DNA:polymorphism: :p.I462V (human)
DNA:SNPs: :6235T>C, 4889A>G, 4887C>A (human)
RGD PMID:22296350, PMID:11115552, PMID:9631944, PMID:22000673 RGD:7257729, RGD:7296938, RGD:7296939, RGD:7296937 NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147
JBrowse link
G Dapk1 death associated protein kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:17133271 NCBI chr17:4,297,038...4,454,941
Ensembl chr17:4,297,224...4,454,778
JBrowse link
G Dnhd1 dynein heavy chain domain 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 1:170,473,792...170,570,220
Ensembl chr 1:170,471,272...170,565,063
JBrowse link
G Ebag9 estrogen receptor binding site associated, antigen, 9 disease_progression ISO RGD PMID:15867365 RGD:2289852 NCBI chr 7:83,564,563...83,582,516
Ensembl chr 7:83,564,563...83,582,508
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 7:11,401,501...11,406,771
Ensembl chr 7:11,401,501...11,406,771
JBrowse link
G Egfr epidermal growth factor receptor ISO protein:increased expression:tumor RGD PMID:18467719 RGD:2293730 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 ISO protein:increased expression:kidney RGD PMID:20978146 RGD:13504705 NCBI chr19:57,660,194...57,701,158
Ensembl chr19:57,662,278...57,699,113
JBrowse link
G Egln2 egl-9 family hypoxia-inducible factor 2 ISO protein:increased expression:kidney RGD PMID:20978146 RGD:13504705 NCBI chr 1:83,969,456...83,977,665
Ensembl chr 1:83,969,457...83,977,236
JBrowse link
G Egln3 egl-9 family hypoxia-inducible factor 3 ISO protein:increased expression:serum RGD PMID:20676679 RGD:13506732 NCBI chr 6:75,050,329...75,075,795
Ensembl chr 6:75,050,329...75,075,795
JBrowse link
G Eloc elongin C ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 5:2,042,991...2,059,357
Ensembl chr 5:2,042,991...2,059,351
JBrowse link
G Epas1 endothelial PAS domain protein 1 IEP
ISO
CTD Direct Evidence: marker/mechanism CTD PMID:21131975, PMID:12750296 RGD:10395373 NCBI chr 6:10,306,508...10,385,239
Ensembl chr 6:10,306,405...10,387,265
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO CTD Direct Evidence: marker/mechanism
mRNA:decreased expression:kidney
CTD PMID:10897039, PMID:17296437, PMID:15360049 RGD:2289930, RGD:2289987 NCBI chr10:86,367,596...86,391,728
Ensembl chr10:86,367,596...86,391,728
JBrowse link
G Erbb4 erb-b2 receptor tyrosine kinase 4 ISO mRNA, protein:decreased expression:kidney RGD PMID:15360049 RGD:2289987 NCBI chr 9:75,021,790...76,178,936
Ensembl chr 9:75,021,790...75,528,644
JBrowse link
G Fas Fas cell surface death receptor ISO DNA:missense mutations:exon
protein:increased expression:serum
RGD PMID:11435457, PMID:12460460, PMID:10654915, PMID:17031406 RGD:2290132, RGD:2290131, RGD:2290133, RGD:2290099 NCBI chr 1:252,589,785...252,624,790
Ensembl chr 1:252,589,785...252,624,790
JBrowse link
G Faslg Fas ligand ISO RGD PMID:17641033, PMID:11435457 RGD:2290051, RGD:2290132 NCBI chr13:79,696,811...79,717,581
Ensembl chr13:79,698,445...79,705,705
JBrowse link
G Fgf2 fibroblast growth factor 2 disease_progression ISO protein:increased expression:serum RGD PMID:1718278 RGD:2290303 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 disease_progression ISO RGD PMID:25900027 RGD:11352663 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Fh fumarate hydratase ISO RGD PMID:17211469 RGD:6907135 NCBI chr13:93,651,486...93,677,371
Ensembl chr13:93,651,484...93,677,377
JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase ISO RGD PMID:10530564, PMID:17539022 RGD:2289903, RGD:2289870 NCBI chr15:15,697,292...16,862,873 JBrowse link
G Flcn folliculin treatment IAGP
ISO
IMP
ClinVar Annotator: match by term: HYPERNEPHROMA
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:12204536, PMID:15805188, PMID:15852235, PMID:18234728, PMID:19457309, PMID:19802896, PMID:20618353, PMID:21937013, PMID:23050938, PMID:24393238, PMID:24728327, PMID:25594584, PMID:25741868, PMID:28492532, PMID:28558743, PMID:14769940, PMID:16369488 RGD:1302869, RGD:13605606 NCBI chr10:46,153,185...46,172,331
Ensembl chr10:46,153,188...46,172,309
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 ISO CTD Direct Evidence: therapeutic
protein:increased expression:kidney, blood, myeloid cell
CTD PMID:16596207, PMID:11846206, PMID:18566400 RGD:2289960, RGD:2301250 NCBI chr12:9,033,993...9,205,886
Ensembl chr12:9,034,308...9,205,905
JBrowse link
G Fmn2 formin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr13:92,569,256...92,887,302 JBrowse link
G Fn1 fibronectin 1 severity ISO RGD PMID:20860816 RGD:7205637 NCBI chr 9:78,900,111...78,969,018
Ensembl chr 9:78,900,103...78,969,078
JBrowse link
G Fpgt fucose-1-phosphate guanylyltransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 2:261,382,015...261,402,950
Ensembl chr 2:261,382,060...261,402,903
JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 disease_progression ISO RGD PMID:25900027 RGD:11352663 NCBI chr 7:60,128,506...60,210,482
Ensembl chr 7:60,128,508...60,210,518
JBrowse link
G Ghrh growth hormone releasing hormone ISO RGD PMID:10962030 RGD:2301426 NCBI chr 3:153,449,124...153,468,794
Ensembl chr 3:153,449,125...153,468,794
JBrowse link
G Gjb1 gap junction protein, beta 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18264126 NCBI chr  X:71,272,030...71,279,973
Ensembl chr  X:71,272,042...71,279,977
JBrowse link
G Grb7 growth factor receptor bound protein 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr10:86,393,186...86,408,893
Ensembl chr10:86,399,827...86,409,348
JBrowse link
G Gsr glutathione-disulfide reductase ISO protein:decreased expression:kidney: RGD PMID:18312938 RGD:7257550 NCBI chr16:62,197,617...62,239,987
Ensembl chr16:62,197,617...62,241,361
JBrowse link
G Gstm1 glutathione S-transferase mu 1 susceptibility ISO CTD Direct Evidence: marker/mechanism CTD PMID:18566013, PMID:26656529, PMID:14504370 RGD:2293845 NCBI chr 2:210,803,869...210,809,461
Ensembl chr 2:210,803,869...210,809,306
JBrowse link
G Gstp1 glutathione S-transferase pi 1 ISO protein:increased expression:kidney
CTD Direct Evidence: marker/mechanism
CTD PMID:15108329, PMID:20464042 RGD:8547946 NCBI chr 1:219,291,679...219,294,147
Ensembl chr 1:219,291,679...219,294,147
JBrowse link
G Gstt1 glutathione S-transferase theta 1 susceptibility ISO CTD Direct Evidence: marker/mechanism CTD PMID:18566013, PMID:26656529, PMID:14504370 RGD:2293845 NCBI chr20:13,799,102...13,816,527
Ensembl chr20:13,799,102...13,816,526
JBrowse link
G Hars1 histidyl-tRNA synthetase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr18:29,611,545...29,629,087
Ensembl chr18:29,611,547...29,629,087
JBrowse link
G Havcr1 hepatitis A virus cellular receptor 1 disease_progression ISO RGD PMID:23352434 RGD:7245470 NCBI chr10:31,813,819...31,860,934
Ensembl chr10:31,813,814...31,848,379
JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 susceptibility ISO DNA:polymorphisms: :-574G>T, +4259T>G (human) RGD PMID:22472081 RGD:7245505 NCBI chr10:31,561,838...31,590,624
Ensembl chr10:31,561,895...31,588,943
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha disease_progression ISO RGD PMID:19302703 RGD:2306222 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Hnf1a HNF1 homeobox A ISO OMIM NCBI chr12:47,407,811...47,433,342
Ensembl chr12:47,407,811...47,433,342
JBrowse link
G Hnf1b HNF1 homeobox B ISO OMIM NCBI chr10:71,159,863...71,218,902
Ensembl chr10:71,159,869...71,218,902
JBrowse link
G Hoxb13 homeo box B13 disease_progression ISO DNA:hypermethylation RGD PMID:16278676 RGD:2314729 NCBI chr10:84,031,955...84,034,228
Ensembl chr10:84,031,955...84,034,228
JBrowse link
G Hspa9 heat shock protein family A (Hsp70) member 9 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr18:27,731,072...27,749,235
Ensembl chr18:27,731,072...27,749,235
JBrowse link
G Hspb1 heat shock protein family B (small) member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr12:23,839,390...23,841,051
Ensembl chr12:23,839,399...23,841,049
JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 9:61,680,529...61,691,202
Ensembl chr 9:61,680,530...61,690,956
JBrowse link
G Igf1r insulin-like growth factor 1 receptor IEP RGD PMID:17952403 RGD:7242846 NCBI chr 1:128,924,921...129,213,816
Ensembl chr 1:128,924,966...129,206,516
JBrowse link
G Igfbp3 insulin-like growth factor binding protein 3 ISO RGD PMID:18076934 RGD:2290003 NCBI chr14:87,457,647...87,465,374
Ensembl chr14:87,457,647...87,465,374
JBrowse link
G Igfbp7 insulin-like growth factor binding protein 7 IEP mRNA:decreased expression:kidney RGD PMID:10854235 RGD:1626565 NCBI chr14:33,010,300...33,070,193
Ensembl chr14:33,010,300...33,070,190
JBrowse link
G Il13 interleukin 13 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22317767 NCBI chr10:38,982,909...38,985,466
Ensembl chr10:38,982,909...38,985,466
JBrowse link
G Il1rn interleukin 1 receptor antagonist ISO RGD PMID:17031403 RGD:6907413 NCBI chr 3:1,449,778...1,468,624
Ensembl chr 3:1,452,644...1,468,614
JBrowse link
G Il2 interleukin 2 ISO RGD PMID:21812652 RGD:5147871 NCBI chr 2:123,847,150...123,851,854
Ensembl chr 2:123,847,150...123,851,854
JBrowse link
G Il4r interleukin 4 receptor susceptibility
disease_progression
ISO DNA:polymorphism:cds:p.I50V (human)
CTD Direct Evidence: marker/mechanism
CTD PMID:22317767, PMID:30472377, PMID:22317767, PMID:12171893 RGD:7207066, RGD:7207070 NCBI chr 1:196,942,343...196,967,221
Ensembl chr 1:196,942,364...196,967,220
JBrowse link
G Il6 interleukin 6 ISO CTD Direct Evidence: marker/mechanism CTD PMID:7834629 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Il6r interleukin 6 receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:7834629 NCBI chr 2:189,196,180...189,255,987
Ensembl chr 2:189,205,701...189,254,628
JBrowse link
G Inpp4b inositol polyphosphate-4-phosphatase type II B ISO CTD Direct Evidence: marker/mechanism CTD PMID:29415082 NCBI chr19:29,592,889...30,341,528
Ensembl chr19:29,597,905...29,968,424
JBrowse link
G Insr insulin receptor ISO RGD PMID:15753986 RGD:2290462 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO RGD PMID:16006965 RGD:1549443 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Jup junction plakoglobin ISO RGD PMID:15701841, PMID:9891472 RGD:2291866, RGD:2291890 NCBI chr10:88,280,517...88,307,451
Ensembl chr10:88,279,632...88,307,412
JBrowse link
G Kank1 KN motif and ankyrin repeat domains 1 ISO DNA, mRNA, protein:hypermethylation, decreased expression:kidney RGD PMID:12133830 RGD:2315654 NCBI chr 1:243,201,073...243,398,531
Ensembl chr 1:243,276,403...243,398,536
JBrowse link
G Kcnh1 potassium voltage-gated channel subfamily H member 1 ISO protein:increased expression:kidney (human) RGD PMID:18777199 RGD:9693695 NCBI chr13:110,920,712...111,232,291
Ensembl chr13:110,920,737...111,232,269
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr15:344,204...1,048,849
Ensembl chr15:344,360...1,047,956
JBrowse link
G Kdm4c lysine demethylase 4C ISO DNA:deletion:cds (human) RGD PMID:22483639 RGD:9587741 NCBI chr 5:90,800,139...91,012,662
Ensembl chr 5:90,800,082...91,012,659
JBrowse link
G Kdm5c lysine demethylase 5C ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr  X:22,302,664...22,349,298
Ensembl chr  X:22,302,485...22,348,627
JBrowse link
G Kdm6a lysine demethylase 6A ISO mRNA, protein:increased expression:kidney (human) RGD PMID:23057811 RGD:9587837 NCBI chr  X:4,805,493...4,945,788
Ensembl chr  X:4,806,277...4,945,944
JBrowse link
G Kdm6b lysine demethylase 6B ISO mRNA, protein:increased expression:kidney (human) RGD PMID:23057811 RGD:9587837 NCBI chr10:56,000,494...56,009,582
Ensembl chr10:56,001,799...56,008,885
JBrowse link
G Kdr kinase insert domain receptor ISO RGD PMID:17653245, PMID:17332933 RGD:2301756, RGD:8552363 NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
JBrowse link
G Keap1 Kelch-like ECH-associated protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 8:22,250,518...22,259,868
Ensembl chr 8:22,250,518...22,259,779
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase ISO chromophobe RCC only
papillary RCC only
RGD PMID:15780567, PMID:15073597 RGD:2292414, RGD:2292421 NCBI chr14:35,072,131...35,149,638
Ensembl chr14:35,072,108...35,149,610
JBrowse link
G Klk6 kallikrein related-peptidase 6 ISO protein:decreased expression:kidney RGD PMID:16340244 RGD:2314864 NCBI chr 1:99,762,195...99,769,486
Ensembl chr 1:99,762,253...99,769,488
JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO mRNA:increased expression:kidney RGD PMID:11851621 RGD:2314914 NCBI chr 4:179,482,562...179,515,483
Ensembl chr 4:179,486,105...179,515,558
JBrowse link
G Krt32 keratin 32 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr10:87,993,569...88,000,818
Ensembl chr10:87,993,551...88,000,534
JBrowse link
G Krt7 keratin 7 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329, PMID:16927643 NCBI chr 7:143,059,731...143,075,907
Ensembl chr 7:143,059,764...143,075,907
JBrowse link
G Krt8 keratin 8 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 7:143,596,511...143,603,745
Ensembl chr 7:143,596,511...143,603,803
JBrowse link
G L1cam L1 cell adhesion molecule ISO CTD Direct Evidence: marker/mechanism CTD PMID:21097529 NCBI chr  X:156,901,244...156,928,064
Ensembl chr  X:156,909,913...156,928,057
JBrowse link
G Ldhb lactate dehydrogenase B ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 4:176,701,980...176,719,999
Ensembl chr 4:176,701,983...176,720,012
JBrowse link
G Lep leptin resistance ISO RGD PMID:19278051 RGD:6907119 NCBI chr 4:56,337,695...56,351,818
Ensembl chr 4:56,337,695...56,351,818
JBrowse link
G Lman2l lectin, mannose-binding 2-like ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 9:43,020,940...43,023,015
Ensembl chr 9:42,999,229...43,022,999
JBrowse link
G Lnpep leucyl and cystinyl aminopeptidase ISO RGD PMID:17692401 RGD:2314919 NCBI chr 1:59,289,392...59,384,540
Ensembl chr 1:59,297,294...59,347,472
Ensembl chr 1:59,297,294...59,347,472
JBrowse link
G LOC102552284 zinc finger protein 420-like ISO CTD Direct Evidence: marker/mechanism CTD PMID:25401301 NCBI chr 1:64,721,939...64,749,676 JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Ltf lactotransferrin ISO RGD PMID:23201854 RGD:7243106 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G M6pr mannose-6-phosphate receptor, cation dependent ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 4:155,084,755...155,093,896
Ensembl chr 4:155,088,317...155,092,827
JBrowse link
G Manf mesencephalic astrocyte-derived neurotrophic factor susceptibility ISO RGD PMID:8649854 RGD:1599220 NCBI chr 8:115,623,175...115,626,408
Ensembl chr 8:115,623,178...115,626,380
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 ISO RGD PMID:7664295, PMID:18172299 RGD:2292629, RGD:2292630 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Mapk1 mitogen activated protein kinase 1 susceptibility ISO DNA:missense mutation: :multiple RGD PMID:22517515 RGD:13504815 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO CTD Direct Evidence: marker/mechanism CTD PMID:25401301, PMID:9140397 RGD:1600122 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G Mgp matrix Gla protein disease_progression ISO RGD PMID:1399132 RGD:2293578 NCBI chr 4:170,856,783...170,860,105
Ensembl chr 4:170,856,751...170,860,225
JBrowse link
G Mitf melanocyte inducing transcription factor ISO CTD Direct Evidence: marker/mechanism CTD PMID:22012259 NCBI chr 4:130,172,484...130,425,496
Ensembl chr 4:130,172,727...130,425,532
JBrowse link
G Mlh1 mutL homolog 1 ISO protein:decreased expression:kidney
ClinVar Annotator: match by term: Renal adenocarcinoma
ClinVar PMID:25741868, PMID:28492532, PMID:16426918 RGD:2293509 NCBI chr 8:119,486,655...119,523,716
Ensembl chr 8:119,486,691...119,523,964
JBrowse link
G Mllt10 MLLT10, histone lysine methyltransferase DOT1L cofactor ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr17:84,847,660...84,981,134
Ensembl chr17:84,881,414...84,979,543
JBrowse link
G Mmp1 matrix metallopeptidase 1 susceptibility
no_association
ISO DNA:insertion:promoter:g.-1607insG (human) RGD PMID:12845675, PMID:17980059 RGD:7207023, RGD:7207082 NCBI chr 8:5,703,206...5,723,593
Ensembl chr 8:5,703,206...5,723,591
JBrowse link
G Mmp2 matrix metallopeptidase 2 disease_progression ISO protein:increased expression:kidney
mRNA:decreased expression:kidney
RGD PMID:17572184, PMID:18035688 RGD:2290359, RGD:2290358 NCBI chr19:15,542,771...15,570,589
Ensembl chr19:15,542,765...15,570,611
JBrowse link
G Mmp3 matrix metallopeptidase 3 ISO DNA:missense mutation:cds:p.E45K rs679620 (human) RGD PMID:15319295, PMID:19551141 RGD:7207067, RGD:7241233 NCBI chr 8:5,676,608...5,698,579
Ensembl chr 8:5,676,665...5,698,579
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO mRNA:increased expression:kidney RGD PMID:18035688 RGD:2290358 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Mok MOK protein kinase ISO mRNA:increased expression:kidney RGD PMID:15900605 RGD:7243170 NCBI chr 6:135,228,755...135,259,645
Ensembl chr 6:135,228,803...135,259,603
JBrowse link
G Msgn1 mesogenin 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 6:36,876,165...36,876,805
Ensembl chr 6:36,876,165...36,876,805
JBrowse link
G Msh2 mutS homolog 2 ISO protein:decreased expression:kidney
ClinVar Annotator: match by term: Renal cell cancer
ClinVar PMID:18325052, PMID:21926548, PMID:24506336, PMID:24763289, PMID:25637381, PMID:25741868, PMID:26467025, PMID:26878173, PMID:26951660, PMID:28195393, PMID:28202063, PMID:28492532, PMID:28640387, PMID:29887214, PMID:16426918 RGD:2293509 NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932
JBrowse link
G Mthfr methylenetetrahydrofolate reductase susceptibility ISO DNA:missense mutation:cds:p.A222V (rs1801133) (human) RGD PMID:18098291 RGD:6893654 NCBI chr 5:164,844,642...164,864,360
Ensembl chr 5:164,845,925...164,860,910
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:23797736, PMID:24631838, PMID:25741868, PMID:26018084, PMID:26619011, PMID:27159400, PMID:21881486 RGD:7207420 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Muc1 mucin 1, cell surface associated disease_progression ISO RGD PMID:10390012 RGD:7245968 NCBI chr 2:188,543,137...188,547,874
Ensembl chr 2:188,543,137...188,547,874
JBrowse link
G Muc4 mucin 4, cell surface associated ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr11:71,242,973...71,285,217
Ensembl chr11:71,243,334...71,284,939
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO
IEP
mRNA:increased expression:kidney (human)
protein:increased expression:kidney (rat)
RGD PMID:21982273, PMID:18055543 RGD:7207793, RGD:7207841 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Nav3 neuron navigator 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 7:52,164,805...52,508,145
Ensembl chr 7:52,165,233...52,404,774
JBrowse link
G Ndrg1 N-myc downstream regulated 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 7:107,734,326...107,775,701
Ensembl chr 7:107,734,323...107,775,714
JBrowse link
G Nf2 neurofibromin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25401301, PMID:19487675 RGD:2315000 NCBI chr14:84,996,905...85,088,547
Ensembl chr14:84,996,905...85,088,523
JBrowse link
G Nlrp12 NLR family, pyrin domain containing 12 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 1:64,506,750...64,543,908
Ensembl chr 1:64,506,735...64,534,912
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 disease_progression ISO RGD PMID:9663430 RGD:2299059 NCBI chr10:81,657,152...81,666,542
Ensembl chr10:81,657,153...81,666,523
JBrowse link
G Nnmt nicotinamide N-methyltransferase ISO mRNA:increased expression:kidney RGD PMID:17070307 RGD:2299120 NCBI chr 8:52,918,437...52,938,172
Ensembl chr 8:52,925,175...52,937,972
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 severity
treatment
ISO RGD PMID:21531004, PMID:18181043 RGD:7174727, RGD:7174733 NCBI chr18:31,728,373...32,704,022
Ensembl chr18:31,728,373...31,749,647
JBrowse link
G Nras NRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Renal cell carcinoma, somatic
ClinVar Annotator: match by term: Hypernephroma
ClinVar PMID:1654209, PMID:2278970, PMID:2674680, PMID:3122217, PMID:6587382, PMID:8120410, PMID:10821536, PMID:12460918, PMID:12727991, PMID:14508525, PMID:15899789, PMID:16273091, PMID:16291983, PMID:16434492, PMID:17699718, PMID:18390968, PMID:18633438, PMID:18668139, PMID:18948947, PMID:19075190, PMID:19657110, PMID:19880792, PMID:20130576, PMID:20149136, PMID:20179705, PMID:20406486, PMID:20619739, PMID:20736745, PMID:21107323, PMID:21305640, PMID:21576590, PMID:21729679, PMID:21829508, PMID:22407852, PMID:22499344, PMID:22718121, PMID:22761467, PMID:22773810, PMID:23076151, PMID:23392294, PMID:23400451, PMID:23414587, PMID:23515407, PMID:23538902, PMID:23569304, PMID:23614898, PMID:24006476, PMID:24033266, PMID:24148783, PMID:24370118, PMID:24671188, PMID:25157968, PMID:25348872, PMID:25695684, PMID:26619011, PMID:26821351, PMID:27050078, PMID:28492532, PMID:28780248 NCBI chr 2:205,553,119...205,563,716
Ensembl chr 2:205,553,163...205,560,791
JBrowse link
G Ogg1 8-oxoguanine DNA glycosylase IEP
ISO
OMIM PMID:18218111, PMID:10987279 RGD:2317140, RGD:1600295 NCBI chr 4:145,282,828...145,289,367
Ensembl chr 4:145,282,797...145,289,326
JBrowse link
G Olr659 olfactory receptor 659 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 3:77,414,999...77,415,928
Ensembl chr 3:77,414,999...77,415,928
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO protein:increased expression:kidney
CTD Direct Evidence: marker/mechanism
CTD PMID:17621631, PMID:17621631 RGD:2299159 NCBI chr 1:162,768,156...162,883,356
Ensembl chr 1:162,768,156...162,883,355
JBrowse link
G Pbrm1 polybromo 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691, PMID:23797736, PMID:21654818 RGD:6907137 NCBI chr16:7,103,714...7,202,899
Ensembl chr16:7,103,998...7,200,362
JBrowse link
G Pcna proliferating cell nuclear antigen severity ISO RGD PMID:11369057 RGD:2315008 NCBI chr 3:124,880,698...124,884,570
Ensembl chr 3:124,880,698...124,884,570
JBrowse link
G Pdcd1 programmed cell death 1 disease_progression ISO RGD PMID:17363529 RGD:7248680 NCBI chr 9:101,305,742...101,319,937
Ensembl chr 9:101,307,764...101,319,845
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha disease_progression ISO protein:increased expression:kidney RGD PMID:12866380 RGD:2292157 NCBI chr14:35,527,926...35,581,130
Ensembl chr14:35,527,927...35,581,031
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO mRNA:increased expression:kidney RGD PMID:15994946, PMID:16865223 RGD:2292198, RGD:2290496 NCBI chr18:56,364,586...56,406,381
Ensembl chr18:56,364,620...56,406,381
JBrowse link
G Pdhb pyruvate dehydrogenase E1 subunit beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:25401301 NCBI chr15:18,540,826...18,546,855
Ensembl chr15:18,539,210...18,546,854
JBrowse link
G Pdpn podoplanin disease_progression ISO RGD PMID:18291512 RGD:2292239 NCBI chr 5:161,947,137...161,981,441
Ensembl chr 5:161,947,137...161,981,441
JBrowse link
G Pdxdc1 pyridoxal-dependent decarboxylase domain containing 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25401301 NCBI chr10:3,232,794...3,321,438
Ensembl chr10:3,232,794...3,321,412
JBrowse link
G Pebp1 phosphatidylethanolamine binding protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25329396 NCBI chr12:45,026,948...45,031,148
Ensembl chr12:45,026,886...45,031,145
JBrowse link
G Pgf placental growth factor disease_progression ISO protein:increased expression:plasma RGD PMID:14981951 RGD:13506645 NCBI chr 6:108,994,016...109,004,598
Ensembl chr 6:108,994,018...109,004,598
JBrowse link
G Pgk1 phosphoglycerate kinase 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr  X:77,263,399...77,279,373
Ensembl chr  X:77,263,359...77,279,367
JBrowse link
G Pidd1 p53-induced death domain protein 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:20208132 NCBI chr 1:214,418,751...214,423,959
Ensembl chr 1:214,419,240...214,423,881
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Renal cell cancer
ClinVar Annotator: match by term: Renal cell carcinoma
ClinVar Annotator: match by term: Renal cell carcinoma, somatic
CTD
ClinVar
PMID:15016963, PMID:15254419, PMID:15520168, PMID:15608678, PMID:15647370, PMID:15805248, PMID:16906227, PMID:16930767, PMID:17376864, PMID:17673550, PMID:18676830, PMID:18725974, PMID:19029981, PMID:19223544, PMID:19366826, PMID:19513541, PMID:19903786, PMID:20453058, PMID:20619739, PMID:21430269, PMID:21558396, PMID:21824802, PMID:22162582, PMID:22162589, PMID:22271473, PMID:22658544, PMID:22729222, PMID:22729223, PMID:22729224, PMID:23066039, PMID:23100325, PMID:23408298, PMID:23797736, PMID:23888070, PMID:24033266, PMID:24265155, PMID:24782230, PMID:25157968, PMID:25741868, PMID:26266975, PMID:26266985, PMID:26619011, PMID:26822237, PMID:27626068, PMID:27631024, PMID:28492532, PMID:29446767 NCBI chr 2:118,831,350...118,861,456
Ensembl chr 2:118,831,350...118,861,454
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 disease_progression ISO RGD PMID:25757764 RGD:13504823 NCBI chr 2:31,742,326...31,826,882
Ensembl chr 2:31,745,088...31,826,867
JBrowse link
G Plau plasminogen activator, urokinase severity ISO mRNA:increased expression:kidney (human) RGD PMID:20544684 RGD:7241133 NCBI chr15:3,644,296...3,650,765
Ensembl chr15:3,644,769...3,650,819
JBrowse link
G Pld2 phospholipase D2 ISO protein:increased expression:kidney RGD PMID:11185526 RGD:2299898 NCBI chr10:57,161,921...57,181,148
Ensembl chr10:57,163,174...57,179,730
JBrowse link
G Pmepa1 prostate transmembrane protein, androgen induced 1 ISO mRNA:increased expression:kidney RGD PMID:11568975 RGD:2315108 NCBI chr 3:171,295,630...171,342,662
Ensembl chr 3:171,294,856...171,342,646
JBrowse link
G Pnkd PNKD metallo-beta-lactamase domain containing ISO CTD Direct Evidence: marker/mechanism CTD PMID:25401301 NCBI chr 9:81,566,074...81,634,531
Ensembl chr 9:81,566,074...81,634,534
JBrowse link
G Pomc proopiomelanocortin ISO CTD Direct Evidence: marker/mechanism CTD PMID:2844640 NCBI chr 6:28,382,937...28,388,771
Ensembl chr 6:28,382,962...28,388,967
JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase IEP protein:increased activity:tumor (rat) RGD PMID:476627 RGD:5135050 NCBI chr14:33,580,541...33,614,919
Ensembl chr14:33,580,541...33,614,919
JBrowse link
G Prame PRAME nuclear receptor transcriptional regulator ISO CTD Direct Evidence: marker/mechanism CTD PMID:16179254 NCBI chr  X:106,082,984...106,091,256
Ensembl chr  X:106,083,203...106,085,878
JBrowse link
G Prcc proline rich mitotic checkpoint control factor ISO CTD Direct Evidence: marker/mechanism CTD NCBI chr 2:187,232,458...187,258,140
Ensembl chr 2:187,232,458...187,258,140
JBrowse link
G Psmb9 proteasome 20S subunit beta 9 ISO DNA:snp:promoter:g.-151G>T (human) RGD PMID:11788900 RGD:9999148 NCBI chr20:3,973,424...3,978,845
Ensembl chr20:3,973,420...3,978,845
JBrowse link
G Pten phosphatase and tensin homolog disease_progression ISO
IEP
ClinVar Annotator: match by term: Renal cell cancer
ClinVar Annotator: match by term: Hypernephroma
ClinVar Annotator: match by term: Renal cell carcinoma
protein:decreased expression:kidney (rat)
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:9467011, PMID:9915974, PMID:10866302, PMID:11504908, PMID:11875759, PMID:16773562, PMID:17526801, PMID:17942903, PMID:18767981, PMID:19457929, PMID:20085938, PMID:20300775, PMID:21659347, PMID:21822720, PMID:21824802, PMID:21828076, PMID:22266152, PMID:22320991, PMID:22327138, PMID:22595938, PMID:23335809, PMID:23399955, PMID:23470840, PMID:24778394, PMID:25157968, PMID:25401301, PMID:25527629, PMID:25741868, PMID:26619011, PMID:26798346, PMID:27477328, PMID:27535533, PMID:28475857, PMID:28492532, PMID:29359449, PMID:29706350, PMID:17681738, PMID:22737271, PMID:15821467, PMID:17886097 RGD:1643331, RGD:12802360, RGD:2292513, RGD:2292500 NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 IEP mRNA:increased expression:kidney RGD PMID:12708469 RGD:2300212 NCBI chr 3:15,560,685...15,582,339
Ensembl chr 3:15,560,712...15,582,344
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 disease_progression IEP
ISO
mRNA:decreased expression:kidney
CTD Direct Evidence: marker/mechanism
CTD PMID:12664575, PMID:12708469, PMID:17899436 RGD:2300212, RGD:2300204 NCBI chr13:67,351,230...67,356,920
Ensembl chr13:67,351,087...67,359,335
JBrowse link
G Pvalb parvalbumin ISO CTD Direct Evidence: marker/mechanism CTD PMID:16927643 NCBI chr 7:119,428,657...119,443,674
Ensembl chr 7:119,429,019...119,441,487
JBrowse link
G Rassf1 Ras association domain family member 1 ISO DNA:hypermethylation:promoter RGD PMID:17645803, PMID:12222680 RGD:2299866, RGD:2291977 NCBI chr 8:116,307,149...116,318,289
Ensembl chr 8:116,307,141...116,318,289
JBrowse link
G Rb1 RB transcriptional corepressor 1 disease_progression ISO RGD PMID:11549509 RGD:2299893 NCBI chr15:55,081,582...55,209,060
Ensembl chr15:55,083,140...55,209,342
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit ISO CTD Direct Evidence: marker/mechanism
protein:increased expression:kidney
CTD PMID:18089796, PMID:17290398, PMID:12663495 RGD:2298755, RGD:2298771 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
JBrowse link
G Rnf139 ring finger protein 139 ISO OMIM PMID:9689122, PMID:17539022 RGD:1599629, RGD:2289870 NCBI chr 7:98,770,840...98,782,025
Ensembl chr 7:98,770,840...98,782,025
JBrowse link
G Rpl14 ribosomal protein L14 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 8:129,240,528...129,243,400
Ensembl chr 8:129,240,528...129,243,402
JBrowse link
G RT1-Db1 RT1 class II, locus Db1 susceptibility
disease_progression
ISO RGD PMID:9044854, PMID:12771724, PMID:10895068 RGD:2314704, RGD:2314695, RGD:2314701 NCBI chr20:4,087,621...4,097,190
Ensembl chr20:4,087,618...4,097,190
JBrowse link
G Ryr1 ryanodine receptor 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 1:87,959,596...88,066,252
Ensembl chr 1:87,959,712...88,066,101
JBrowse link
G Scarb1 scavenger receptor class B, member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:21131975 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
G Sdhb succinate dehydrogenase complex iron sulfur subunit B ISO RGD PMID:21771581 RGD:6907134 NCBI chr 5:159,484,378...159,505,063
Ensembl chr 5:159,484,370...159,505,064
JBrowse link
G Sdhd succinate dehydrogenase complex subunit D ISO RGD PMID:21771581 RGD:6907134 NCBI chr 8:55,028,125...55,037,604
Ensembl chr 8:55,028,125...55,037,604
JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691, PMID:23797736, PMID:21654818 RGD:6907137 NCBI chr 8:118,802,478...118,888,224
Ensembl chr 8:118,803,075...118,888,224
JBrowse link
G Sf3b2 splicing factor 3b, subunit 2 ISO ClinVar Annotator: match by term: Renal cell carcinoma ClinVar PMID:26619011 NCBI chr 1:220,645,685...220,665,611
Ensembl chr 1:220,645,672...220,665,603
JBrowse link
G Sfrp1 secreted frizzled-related protein 1 ISO mRNA:decreased expression:kidney RGD PMID:20420713 RGD:4107084 NCBI chr16:73,372,007...73,410,777
Ensembl chr16:73,372,007...73,410,777
JBrowse link
G Sfrp2 secreted frizzled-related protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:18404682 NCBI chr 2:182,723,732...182,731,277
Ensembl chr 2:182,723,854...182,731,764
JBrowse link
G Shank1 SH3 and multiple ankyrin repeat domains 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 1:100,297,137...100,344,377
Ensembl chr 1:100,297,152...100,344,377
JBrowse link
G Skp2 S-phase kinase associated protein 2 disease_progression ISO RGD PMID:18922157 RGD:2315038 NCBI chr 2:58,506,146...58,534,211
Ensembl chr 2:58,506,151...58,534,211
JBrowse link
G Slc2a1 solute carrier family 2 member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:7921415 NCBI chr 5:138,154,677...138,182,897
Ensembl chr 5:138,154,673...138,182,897
JBrowse link
G Slc49a4 solute carrier family 49 member 4 susceptibility ISO DNA:translocation:intron:t(2;3)(q35;q21) RGD PMID:11912179 RGD:1601072 NCBI chr11:68,198,709...68,272,766
Ensembl chr11:68,198,709...68,272,758
JBrowse link
G Slc5a3 solute carrier family 5 member 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:25401301 NCBI chr11:32,229,366...32,231,812 JBrowse link
G Smad2 SMAD family member 2 severity ISO protein:decreased expression:kidney RGD PMID:11332076 RGD:2299973 NCBI chr18:72,550,107...72,612,078
Ensembl chr18:72,550,219...72,612,078
JBrowse link
G Smad4 SMAD family member 4 severity ISO protein:decreased expression:kidney RGD PMID:11332076 RGD:2299973 NCBI chr18:69,626,682...69,657,373
Ensembl chr18:69,627,757...69,671,199
JBrowse link
G Sod2 superoxide dismutase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 1:47,914,757...47,921,587
Ensembl chr 1:47,914,759...47,921,587
JBrowse link
G Sparc secreted protein acidic and cysteine rich ISO mRNA, protein:increased expression:kidney RGD PMID:11679940 RGD:2300025 NCBI chr10:40,742,390...40,764,232
Ensembl chr10:40,742,400...40,764,185
JBrowse link
G Spink1 serine peptidase inhibitor, Kazal type 1 disease_progression ISO protein:decreased expression:kidney
protein:increased expression:serum
RGD PMID:10508484, PMID:11176522 RGD:2300388, RGD:2300387 NCBI chr18:38,221,919...38,242,092
Ensembl chr18:38,221,681...38,242,119
JBrowse link
G Sptbn4 spectrin, beta, non-erythrocytic 4 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 1:84,168,494...84,254,679
Ensembl chr 1:84,168,495...84,254,645
JBrowse link
G St14 ST14 transmembrane serine protease matriptase ISO protein:increased expression:kidney RGD PMID:16501837 RGD:2315090 NCBI chr 8:32,240,113...32,280,813
Ensembl chr 8:32,240,133...32,280,869
JBrowse link
G Stat3 signal transducer and activator of transcription 3 disease_progression ISO DNA:snp
protein:increased phosphorylation:kidney
RGD PMID:17602083, PMID:12131365 RGD:2291913, RGD:2291917 NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233
JBrowse link
G Syne2 spectrin repeat containing nuclear envelope protein 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 6:98,884,269...99,153,551 JBrowse link
G Tagln2 transgelin 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr13:90,807,196...90,814,119
Ensembl chr13:90,807,199...90,814,119
JBrowse link
G Terc telomerase RNA component ISO RNA:decreased expression:kidney RGD PMID:11156238 RGD:2291972 NCBI chr 2:116,432,723...116,433,110
Ensembl chr 2:116,432,691...116,433,110
JBrowse link
G Tert telomerase reverse transcriptase ISO mRNA, protein:increased expression:kidney RGD PMID:18250061 RGD:2291980 NCBI chr 1:32,250,876...32,275,330
Ensembl chr 1:32,251,714...32,272,476
JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 2:238,719,389...238,802,975
Ensembl chr 2:238,720,835...238,803,024
JBrowse link
G Tfe3 transcription factor binding to IGHM enhancer 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:12917640 RGD:1599384 NCBI chr  X:15,574,579...15,587,826
Ensembl chr  X:15,575,934...15,587,419
JBrowse link
G Tfrc transferrin receptor ISO protein:increased expression:kidney, T cell
mRNA:decreased expression:kidney, T cell
RGD PMID:12394762, PMID:8050820 RGD:2292024, RGD:2292025 NCBI chr11:71,397,423...71,419,263
Ensembl chr11:71,397,383...71,419,223
JBrowse link
G Tgfb1 transforming growth factor, beta 1 disease_progression ISO protein:increased expression:peripheral blood RGD PMID:26749573, PMID:25499257, PMID:26631499 RGD:11560966, RGD:13506175, RGD:13506173 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tgm2 transglutaminase 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:15108329 NCBI chr 3:154,597,165...154,627,257
Ensembl chr 3:154,597,168...154,627,257
JBrowse link
G Thra thyroid hormone receptor alpha ISO DNA:mutations (human) RGD PMID:11756220 RGD:2315097 NCBI chr10:86,657,285...86,684,935
Ensembl chr10:86,657,285...86,684,933
JBrowse link
G Thrb thyroid hormone receptor beta ISO DNA:mutations (human) RGD PMID:11756220 RGD:2315097 NCBI chr15:8,890,578...9,239,815
Ensembl chr15:8,890,578...9,086,282
JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 disease_progression ISO protein:increased expression:kidney RGD PMID:11595703 RGD:2290350 NCBI chr  X:1,364,771...1,369,451
Ensembl chr  X:1,364,786...1,369,384
JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 disease_progression ISO protein:increased expression:kidney
mRNA:decreased expression:kidney
RGD PMID:17572184, PMID:18035688 RGD:2290359, RGD:2290358 NCBI chr10:107,338,465...107,386,072
Ensembl chr10:107,338,465...107,386,072
JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 ISO mRNA:decreased expression:kidney RGD PMID:11576837 RGD:2290421 NCBI chr 7:23,543,125...23,594,170
Ensembl chr 7:23,544,215...23,594,133
JBrowse link
G Timp4 TIMP metallopeptidase inhibitor 4 ISO mRNA:decreased expression:kidney RGD PMID:11576837 RGD:2290421 NCBI chr 4:147,156,948...147,163,467
Ensembl chr 4:147,156,948...147,163,467
JBrowse link
G Tlr9 toll-like receptor 9 severity ISO protein:decreased expression:tumor, cytoplasm (human) RGD PMID:21929816 RGD:7246915 NCBI chr 8:114,916,122...114,920,171
Ensembl chr 8:114,916,122...114,920,171
JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:19384924, PMID:19904265 RGD:2315119, RGD:2315113 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tnfrsf10b TNF receptor superfamily member 10b ISO mRNA:increased expression:kidney RGD PMID:16865223, PMID:17184908 RGD:2290496, RGD:2290491 NCBI chr15:51,433,853...51,464,215 JBrowse link
G Tnfrsf1a TNF receptor superfamily member 1A ISO protein:increased expression:serum (human) RGD PMID:7912320 RGD:5131437 NCBI chr 4:157,864,905...157,877,634
Ensembl chr 4:157,864,969...157,877,633
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B ISO RGD PMID:20566746 RGD:7245512 NCBI chr 5:163,136,390...163,167,299
Ensembl chr 5:163,136,390...163,167,299
JBrowse link
G Tnfsf10 TNF superfamily member 10 ISO CTD Direct Evidence: therapeutic CTD PMID:20403343 NCBI chr 2:113,008,008...113,026,899
Ensembl chr 2:113,007,549...113,026,899
JBrowse link
G Tp53 tumor protein p53 disease_progression ISO ClinVar Annotator: match by term: Renal cell cancer
ClinVar Annotator: match by term: Hypernephroma
ClinVar Annotator: match by term: Renal cell carcinoma
ClinVar Annotator: match by term: Renal cell carcinoma, papillary, 1
ClinVar Annotator: match by term: Renal cell carcinoma, somatic
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
PMID:1349175, PMID:1565143, PMID:1565144, PMID:1644930, PMID:1737852, PMID:7651740, PMID:7707106, PMID:7732013, PMID:7887414, PMID:8023157, PMID:8080050, PMID:8118819, PMID:8401536, PMID:8633021, PMID:8718514, PMID:8829627, PMID:8869100, PMID:9096669, PMID:9242456, PMID:9290701, PMID:9546439, PMID:9572492, PMID:9635828, PMID:9662334, PMID:9667734, PMID:10064694, PMID:10366100, PMID:10432928, PMID:10589545, PMID:10753186, PMID:10761705, PMID:10864200, PMID:10922393, PMID:11370630, PMID:11429705, PMID:11793474, PMID:11896595, PMID:11920788, PMID:11920959, PMID:12826609, PMID:12909720, PMID:12917626, PMID:14584079, PMID:15037740, PMID:15161705, PMID:15850016, PMID:15925506, PMID:15977174, PMID:15982667, PMID:16312222, PMID:16494995, PMID:16508005, PMID:16736287, PMID:16861262, PMID:17015838, PMID:17275163, PMID:17390010, PMID:17401428, PMID:17541742, PMID:17572079, PMID:17606709, PMID:18208484, PMID:18307025, PMID:18453682, PMID:18511570, PMID:18555592, PMID:19012332, PMID:19101993, PMID:19147582, PMID:19171880, PMID:19336573, PMID:19468865, PMID:19556618, PMID:19681600, PMID:19850740, PMID:19913028, PMID:20028212, PMID:20118236, PMID:20127978, PMID:20128691, PMID:20234365, PMID:20407015, PMID:20505364, PMID:20506564, PMID:20522432, PMID:20805372, PMID:20972454, PMID:21059199, PMID:21159183, PMID:21232794, PMID:21305319, PMID:21319261, PMID:21343334, PMID:21356188, PMID:21519010, PMID:21626334, PMID:21674059, PMID:21761402, PMID:22090360, PMID:22138691, PMID:22186996, PMID:22672556, PMID:22710932, PMID:22844452, PMID:22887876, PMID:22923379, PMID:22983585, PMID:23031740, PMID:23161690, PMID:23165212, PMID:23175693, PMID:23259501, PMID:23315175, PMID:23630318, PMID:23797736, PMID:23894400, PMID:24033266, PMID:24256616, PMID:24381225, PMID:24384472, PMID:24395441, PMID:24487413, PMID:24573247, PMID:24641375, PMID:24702488, PMID:24728327, PMID:24766216, PMID:25293557, PMID:25401301, PMID:25503501, PMID:25584008, PMID:25584637, PMID:25619955, PMID:25741868, PMID:25787918, PMID:25896519, PMID:25952993, PMID:25980754, PMID:26014290, PMID:26022348, PMID:26230955, PMID:26270727, PMID:26467025, PMID:26554828, PMID:26556299, PMID:26585234, PMID:26619011, PMID:26659639, PMID:26787237, PMID:26845104, PMID:26878390, PMID:26911350, PMID:26976419, PMID:27022024, PMID:27077130, PMID:27189670, PMID:27276561, PMID:27463065, PMID:27493922, PMID:27533082, PMID:27616075, PMID:27622479, PMID:27680515, PMID:27895058, PMID:27959731, PMID:28135145, PMID:28279309, PMID:28369373, PMID:28472496, PMID:28492532, PMID:28802053, PMID:28861920, PMID:28915717, PMID:28975465, PMID:29070607, PMID:29126202, PMID:29324801, PMID:29489754, PMID:29753700, PMID:29979965, PMID:30128536, PMID:30216591, PMID:30224644, PMID:30297838, PMID:30306255, PMID:30311369, PMID:30352134, PMID:30450585, PMID:30720243, PMID:17094408 RGD:2290544 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
G Tp73 tumor protein p73 ISO RGD PMID:9796703 RGD:2291837 NCBI chr 5:171,355,876...171,415,354
Ensembl chr 5:171,355,876...171,415,354
JBrowse link
G Tsc1 TSC complex subunit 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145
JBrowse link
G Tsc2 TSC complex subunit 2 treatment ISO
IAGP
IMP
DNA:nonsense mutations;missense mutations; splice-site mutation:multiple RGD PMID:10096549, PMID:10029074, PMID:18695678 RGD:11568655, RGD:68666, RGD:11568661 NCBI chr10:13,962,006...13,996,684
Ensembl chr10:13,961,947...13,996,584
JBrowse link
G Txnip thioredoxin interacting protein IDA DNA, mRNA, protein:hypermethylation, decreased expression:promoter, kidney RGD PMID:15834431 RGD:1642756 NCBI chr 2:198,683,168...198,686,971
Ensembl chr 2:198,683,159...198,686,974
JBrowse link
G Tymp thymidine phosphorylase severity ISO protein:increased expression:kidney RGD PMID:12614261, PMID:16861722 RGD:2293723, RGD:2293717 NCBI chr 7:130,342,481...130,347,845
Ensembl chr 7:130,342,483...130,347,587
JBrowse link
G Unc5c unc-5 netrin receptor C ISO CTD Direct Evidence: marker/mechanism CTD PMID:21600761 NCBI chr 2:247,045,813...247,397,483
Ensembl chr 2:247,248,407...247,397,483
JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked ISO mRNA, protein:increased expression:kidney (human) RGD PMID:21654818, PMID:23057811 RGD:6907137, RGD:9587837 NCBI chr  Y:1,065,274...1,206,127
Ensembl chr  Y:989,240...1,206,096
JBrowse link
G Vdr vitamin D receptor ISO GAD PMID:15118671 RGD:1331525 NCBI chr 7:139,344,452...139,394,138
Ensembl chr 7:139,342,063...139,394,166
JBrowse link
G Vegfa vascular endothelial growth factor A disease_progression ISO RGD PMID:19755989 RGD:2315455 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
JBrowse link
G Vegfc vascular endothelial growth factor C ISO RGD PMID:19500329 RGD:2315476 NCBI chr16:40,440,371...40,555,178
Ensembl chr16:40,440,207...40,555,576
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO ClinVar Annotator: match by term: Renal cell carcinoma with paraneoplastic erythrocytosis
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:9137812, PMID:10340905, PMID:11171960, PMID:11986208, PMID:15177666, PMID:15607616, PMID:19270817, PMID:19473641, PMID:21097529, PMID:22138691, PMID:23797736, PMID:24755467, PMID:28492532, PMID:29124493, PMID:7493907 RGD:1580367 NCBI chr 4:145,580,869...145,587,835
Ensembl chr 4:145,580,799...145,587,845
JBrowse link
G Vmo1 vitelline membrane outer layer 1 homolog ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr10:57,120,499...57,121,584
Ensembl chr10:57,120,499...57,121,584
JBrowse link
G Vwf von Willebrand factor disease_progression ISO protein:increased expression:plasma RGD PMID:21953673 RGD:7207032 NCBI chr 4:158,085,059...158,219,525
Ensembl chr 4:158,088,505...158,219,523
JBrowse link
G Wif1 Wnt inhibitory factor 1 ISO DNA:hypermethylation:promoter RGD PMID:17145819 RGD:2291869 NCBI chr 7:63,094,955...63,165,158
Ensembl chr 7:63,094,911...63,165,159
JBrowse link
G Wnt11 Wnt family member 11 ISO RGD PMID:11712081 RGD:2299947 NCBI chr 1:163,794,136...163,813,756
Ensembl chr 1:163,797,660...163,813,756
JBrowse link
G Xiap X-linked inhibitor of apoptosis disease_progression ISO protein:increased expression:kidney RGD PMID:17332931 RGD:2315854 NCBI chr  X:128,409,425...128,455,786
Ensembl chr  X:128,409,472...128,453,000
JBrowse link
G Xrcc1 X-ray repair cross complementing 1 susceptibility ISO DNA:SNP: :p.R399Q RGD PMID:16510122 RGD:2302577 NCBI chr 1:81,412,635...81,441,680
Ensembl chr 1:81,413,353...81,441,678
JBrowse link
G Yipf3 Yip1 domain family, member 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 9:17,115,308...17,120,659
Ensembl chr 9:17,115,343...17,120,677
JBrowse link
G Zfp536 zinc finger protein 536 ISO CTD Direct Evidence: marker/mechanism CTD PMID:23797736 NCBI chr 1:93,689,114...94,155,457
Ensembl chr 1:93,851,454...93,949,187
JBrowse link
G Zfp804a zinc finger protein 804A ISO CTD Direct Evidence: marker/mechanism CTD PMID:22138691 NCBI chr 3:69,268,348...69,574,118
Ensembl chr 3:69,549,673...69,573,420
JBrowse link
Renal Cell Carcinoma 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Msh2 mutS homolog 2 ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:18325052, PMID:21926548, PMID:24506336, PMID:24763289, PMID:25637381, PMID:25741868, PMID:26467025, PMID:26878173, PMID:26951660, PMID:28195393, PMID:28202063, PMID:28492532, PMID:28640387, PMID:29887214 NCBI chr 6:11,215,951...11,274,916
Ensembl chr 6:11,215,963...11,274,932
JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:24631838, PMID:25741868, PMID:26018084, PMID:26619011, PMID:27159400 NCBI chr 5:165,263,813...165,373,967
Ensembl chr 5:165,263,800...165,373,967
JBrowse link
G Nras NRAS proto-oncogene, GTPase ISO ClinVar Annotator: match by term: Renal cell carcinoma 1 ClinVar PMID:1654209, PMID:2278970, PMID:2674680, PMID:3122217, PMID:6587382, PMID:8120410, PMID:10821536, PMID:12460918, PMID:12727991, PMID:14508525, PMID:15899789, PMID:16273091, PMID:16291983, PMID:16434492, PMID:17699718, PMID:18390968, PMID:18633438, PMID:18668139, PMID:18948947, PMID:19075190, PMID:19657110, PMID:19880792, PMID:20130576, PMID:20149136, PMID:20179705, PMID:20406486, PMID:20619739, PMID:20736745, PMID:21107323, PMID:21305640, PMID:21576590, PMID:21729679, PMID:21829508, PMID:22407852, PMID:22499344, PMID:22718121, PMID:22761467, PMID:22773810, PMID:23076151, PMID:23392294, PMID:23400451, PMID:23414587, PMID:23515407, PMID:23538902, PMID:23569304, PMID:23614898, PMID:24006476, PMID:24033266, PMID:24148783, PMID:24370118, PMID:24671188, PMID:25157968, PMID:25348872, PMID:25695684, PMID:26619011, PMID:26821351, PMID:27050078, PMID:28492532, PMID:28780248