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ONTOLOGY REPORT - ANNOTATIONS


Term:ovarian carcinoma
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Accession:DOID:4001 term browser browse the term
Definition:An ovarian cancer that has_material_basis_in epithelial tissue and is located_in the ovary. (DO)
Synonyms:primary_id: RDO:9002506
 xref: NCI:C4908
For additional species annotation, visit the Alliance of Genome Resources.


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ovarian carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt2 AKT serine/threonine kinase 2 JBrowse link 1 84,400,939 84,451,223 RGD:2315603
G Amh anti-Mullerian hormone JBrowse link 7 11,775,155 11,777,503 RGD:2315652
G Bmp7 bone morphogenetic protein 7 JBrowse link 3 170,879,972 170,955,820 RGD:2289032
G Cabin1 calcineurin binding protein 1 JBrowse link 20 13,836,032 13,963,003 RGD:10054392
G Casp6 caspase 6 JBrowse link 2 235,341,326 235,353,715 RGD:2301336
G Cav1 caveolin 1 JBrowse link 4 44,597,123 44,630,206 RGD:2289113
G Ccnd1 cyclin D1 JBrowse link 1 218,090,750 218,100,447 RGD:2296036
G Ccne1 cyclin E1 JBrowse link 1 94,485,830 94,495,112 RGD:2289335
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:4892092
G Dusp1 dual specificity phosphatase 1 JBrowse link 10 16,970,642 16,973,425 RGD:2298695
G Edn1 endothelin 1 JBrowse link 17 22,136,814 22,143,745 RGD:4144954
G Hdac3 histone deacetylase 3 JBrowse link 18 31,073,057 31,094,347 RGD:2306205
G Il13 interleukin 13 JBrowse link 10 38,982,909 38,985,466 RGD:2290344
G Kiss1 KiSS-1 metastasis-suppressor JBrowse link 13 50,529,506 50,537,603 RGD:2302169
G Klk13 kallikrein related-peptidase 13 JBrowse link 1 99,648,658 99,661,025 RGD:2314862
G L1cam L1 cell adhesion molecule JBrowse link X 156,901,244 156,928,064 RGD:6483445
RGD:6483449
G Letmd1 LETM1 domain containing 1 JBrowse link 7 142,106,364 142,119,900 RGD:2314918
G Map2k1 mitogen activated protein kinase kinase 1 JBrowse link 8 69,134,218 69,722,573 RGD:2306053
G Map2k6 mitogen-activated protein kinase kinase 6 JBrowse link 10 98,707,160 98,823,054 RGD:2293338
G Mmp13 matrix metallopeptidase 13 JBrowse link 8 5,522,739 5,533,018 RGD:2306083
RGD:2306074
G Mt-cyb mitochondrially encoded cytochrome b JBrowse link MT 14,136 15,278 RGD:2298954
G Mtus1 microtubule associated scaffold protein 1 JBrowse link 16 54,240,892 54,386,131 RGD:2317019
G Muc16 mucin 16, cell surface associated JBrowse link 8 18,438,838 18,639,777 RGD:2325203
G Ncoa4 nuclear receptor coactivator 4 JBrowse link 16 8,302,950 8,323,294 RGD:2293537
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 JBrowse link 10 81,648,216 81,653,717 RGD:2299073
G Pak1 p21 (RAC1) activated kinase 1 JBrowse link 1 162,768,156 162,883,356 RGD:2299164
G Prkca protein kinase C, alpha JBrowse link 10 96,186,509 96,585,168 RGD:2292460
G Prkci protein kinase C, iota JBrowse link 2 115,941,998 116,002,550 RGD:2292460
G Ptk2 protein tyrosine kinase 2 JBrowse link 7 114,436,419 114,611,317 RGD:2292572
RGD:2292563
G Rhoa ras homolog family member A JBrowse link 8 117,082,440 117,116,244 RGD:2298873
G Rhoc ras homolog family member C JBrowse link 2 207,271,692 207,278,010 RGD:2298873
G Six1 SIX homeobox 1 JBrowse link 6 95,929,060 95,934,296 RGD:11561962
G Smad2 SMAD family member 2 JBrowse link 18 72,550,107 72,612,078 RGD:2299967
G Socs1 suppressor of cytokine signaling 1 JBrowse link 10 4,956,795 4,958,472 RGD:2298907
G Socs2 suppressor of cytokine signaling 2 JBrowse link 7 36,495,496 36,500,878 RGD:2298907
G Stk11 serine/threonine kinase 11 JBrowse link 7 12,440,751 12,457,513 RGD:2298556
G Tff1 trefoil factor 1 JBrowse link 20 9,892,124 9,895,984 RGD:2292004
G Timp4 TIMP metallopeptidase inhibitor 4 JBrowse link 4 147,156,948 147,163,467 RGD:2290414
G Vegfd vascular endothelial growth factor D JBrowse link X 31,816,480 31,852,239 RGD:2315478
ovarian serous carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arhgef10l Rho guanine nucleotide exchange factor 10 like JBrowse link 5 159,018,373 159,089,383 RGD:14348955
G Map2k4 mitogen activated protein kinase kinase 4 JBrowse link 10 52,196,121 52,301,887 RGD:2293332
G Wt1 WT1 transcription factor JBrowse link 3 95,133,221 95,180,574 RGD:2315539
ovarian serous cystadenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G B2m beta-2 microglobulin JBrowse link 3 114,087,287 114,093,311 RGD:8554872
G Braf B-Raf proto-oncogene, serine/threonine kinase JBrowse link 4 67,389,331 67,520,549 RGD:8554872
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link 10 86,367,596 86,391,728 RGD:8554872
G Fbxw7 F-box and WD repeat domain containing 7 JBrowse link 2 184,230,191 184,309,805 RGD:8554872
G Hras HRas proto-oncogene, GTPase JBrowse link 1 214,178,404 214,181,841 RGD:8554872
G Lrrc56 leucine rich repeat containing 56 JBrowse link 1 214,182,232 214,197,184 RGD:8554872
G Nras NRAS proto-oncogene, GTPase JBrowse link 2 205,553,119 205,563,716 RGD:8554872
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha JBrowse link 2 118,831,350 118,861,456 RGD:8554872
G Ppp2r1a protein phosphatase 2 scaffold subunit A alpha JBrowse link 1 60,717,386 60,736,629 RGD:8554872
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:8554872
ovarian small cell carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:8554872
ovary adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccnd3 cyclin D3 JBrowse link 9 15,404,816 15,410,905 RGD:2316011
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link 10 86,367,596 86,391,728 RGD:8554872
G Prame preferentially expressed antigen in melanoma JBrowse link X 106,082,984 106,091,256 RGD:11535054
ovary serous adenocarcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brca1 BRCA1, DNA repair associated JBrowse link 10 89,394,821 89,455,093 RGD:8554872
G Brca2 BRCA2, DNA repair associated JBrowse link 12 503,660 544,754 RGD:8554872
G Bsg basigin (Ok blood group) JBrowse link 7 12,875,536 12,882,753 RGD:2289053
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:2290540

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 15626
    disease of cellular proliferation 5797
      cancer 4113
        cell type cancer 2921
          carcinoma 1890
            ovarian carcinoma 57
              familiar ovarian carcinoma 0
              ovarian clear cell carcinoma 0
              ovarian large-cell neuroendocrine carcinoma 0
              ovarian seromucinous carcinoma 0
              ovarian serous carcinoma 3
              ovarian small cell carcinoma + 1
              ovarian squamous cell carcinoma 0
              ovary adenocarcinoma + 15
              ovary papillary carcinoma 0
Path 2
Term Annotations click to browse term
  disease 15626
    disease of anatomical entity 14956
      Urogenital Diseases 3965
        Female Urogenital Diseases and Pregnancy Complications 1718
          Female Urogenital Diseases 1461
            female reproductive system disease 1457
              Adnexal Diseases 647
                ovarian disease 641
                  Ovarian Neoplasms 390
                    ovarian cancer 237
                      ovary epithelial cancer 79
                        malignant ovarian surface epithelial-stromal neoplasm 57
                          ovarian carcinoma 57
                            familiar ovarian carcinoma 0
                            ovarian clear cell carcinoma 0
                            ovarian large-cell neuroendocrine carcinoma 0
                            ovarian seromucinous carcinoma 0
                            ovarian serous carcinoma 3
                            ovarian small cell carcinoma + 1
                            ovarian squamous cell carcinoma 0
                            ovary adenocarcinoma + 15
                            ovary papillary carcinoma 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.