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ONTOLOGY REPORT - ANNOTATIONS


Term:renal cell carcinoma
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Accession:DOID:4450 term browser browse the term
Definition:A heterogeneous group of sporadic or hereditary carcinoma derived from cells of the KIDNEYS. There are several subtypes including the clear cells, the papillary, the chromophobe, the collecting duct, the spindle cells (sarcomatoid), or mixed cell-type carcinoma.
Synonyms:exact_synonym: Grawitz tumor;   Hypernephroid Carcinoma;   Hypernephroma;   Nephroid Carcinoma;   Nephroid Carcinomas;   RCC;   adenocarcinoma of kidney;   chromophil renal cell carcinoma;   hypernephroid carcinomas;   hypernephromas;   nonpapillary renal cell carcinoma;   renal adenocarcinoma;   renal cell adenocarcinoma;   renal cell adenocarcinomas;   renal cell cancer;   renal cell cancers;   renal cell carcinomas;   renal collecting duct carcinoma
 narrow_synonym: ADENOCARCINOMA OF KIDNEY NONPAPILLARY RENAL CARCINOMA 1 LOCUS;   NRC1;   renal cell carcinoma with paraneoplastic erythrocytosis;   renal cell carcinoma, somatic
 primary_id: MESH:D002292
 alt_id: OMIM:144700;   RDO:0000440
 xref: GARD:13215;   NCI:C9385;   ORDO:217071
For additional species annotation, visit the Alliance of Genome Resources.


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renal cell carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ABCB1 ATP binding cassette subfamily B member 1 JBrowse link 7 87,503,017 87,713,323 RGD:2315557
RGD:2315559
G ABCG2 ATP binding cassette subfamily G member 2 (Junior blood group) JBrowse link 4 88,090,264 88,231,626 RGD:2315569
G ACHE acetylcholinesterase (Cartwright blood group) JBrowse link 7 100,889,994 100,896,994 RGD:11554173
G ACY1 aminoacylase 1 JBrowse link 3 51,983,535 51,989,197 RGD:11554173
G ADGRB1 adhesion G protein-coupled receptor B1 JBrowse link 8 142,449,649 142,545,009 RGD:13831349
G ADIPOQ adiponectin, C1Q and collagen domain containing JBrowse link 3 186,842,710 186,858,463 RGD:11554173
G AFP alpha fetoprotein JBrowse link 4 73,436,221 73,456,174 RGD:2292042
G AGTR1 angiotensin II receptor type 1 JBrowse link 3 148,697,871 148,743,003 RGD:6903280
G AGTR2 angiotensin II receptor type 2 JBrowse link X 116,170,744 116,174,974 RGD:6903280
G AHNAK AHNAK nucleoprotein JBrowse link 11 62,433,544 62,546,806 RGD:11554173
G AKAP13 A-kinase anchoring protein 13 JBrowse link 15 85,380,603 85,749,358 RGD:11554173
G AKT1 AKT serine/threonine kinase 1 JBrowse link 14 104,769,349 104,795,748 RGD:1643331
G AKT3 AKT serine/threonine kinase 3 JBrowse link 1 243,488,233 243,851,079 RGD:13503319
G ALAD aminolevulinate dehydratase JBrowse link 9 113,386,312 113,401,338 RGD:11554173
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 JBrowse link 9 72,900,671 72,953,053 RGD:11554173
G ALK ALK receptor tyrosine kinase JBrowse link 2 29,190,992 29,921,589 RGD:11554173
G ALOX12 arachidonate 12-lipoxygenase, 12S type JBrowse link 17 6,993,791 7,010,754 RGD:2315610
G ALOX12B arachidonate 12-lipoxygenase, 12R type JBrowse link 17 8,072,636 8,087,716 RGD:11554173
G ALOX5 arachidonate 5-lipoxygenase JBrowse link 10 45,374,166 45,446,121 RGD:11554173
G AMACR alpha-methylacyl-CoA racemase JBrowse link 5 33,986,165 34,008,050 RGD:2315633
G ANG angiogenin JBrowse link 14 20,684,177 20,694,186 RGD:2325699
G ANGPT1 angiopoietin 1 JBrowse link 8 107,249,482 107,497,918 RGD:1643335
G ANXA1 annexin A1 JBrowse link 9 73,151,865 73,170,393 RGD:7421570
G ANXA2 annexin A2 JBrowse link 15 60,347,151 60,398,025 RGD:7421570
G ANXA4 annexin A4 JBrowse link 2 69,643,808 69,827,112 RGD:11554173
G AP5M1 adaptor related protein complex 5 subunit mu 1 JBrowse link 14 57,268,915 57,298,742 RGD:11554173
G APAF1 apoptotic peptidase activating factor 1 JBrowse link 12 98,645,141 98,735,433 RGD:11554173
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:7242056
RGD:7242060
RGD:7242059
G APRT adenine phosphoribosyltransferase JBrowse link 16 88,809,339 88,811,928 RGD:11554173
G ARNT aryl hydrocarbon receptor nuclear translocator JBrowse link 1 150,809,713 150,876,737 RGD:13503335
G ASB15 ankyrin repeat and SOCS box containing 15 JBrowse link 7 123,567,003 123,639,481 RGD:11554173
G ATM ATM serine/threonine kinase JBrowse link 11 108,222,484 108,369,102 RGD:8554872
G ATP5MC2 ATP synthase membrane subunit c locus 2 JBrowse link 12 53,665,160 53,677,546 RGD:14696812
G AURKA aurora kinase A JBrowse link 20 56,369,389 56,392,337 RGD:1643346
G BAD BCL2 associated agonist of cell death JBrowse link 11 64,269,828 64,284,704 RGD:2292677
G BAK1 BCL2 antagonist/killer 1 JBrowse link 6 33,572,552 33,580,296 RGD:2315703
G BAP1 BRCA1 associated protein 1 JBrowse link 3 52,401,004 52,410,030 RGD:11554173
G BCHE butyrylcholinesterase JBrowse link 3 165,772,904 165,837,451 RGD:11554173
G BCL2 BCL2 apoptosis regulator JBrowse link 18 63,123,346 63,320,280 RGD:2293019
RGD:2298896
G BCL2L1 BCL2 like 1 JBrowse link 20 31,664,452 31,723,963 RGD:1643483
G BIK BCL2 interacting killer JBrowse link 22 43,110,750 43,129,712 RGD:14394818
G BIRC2 baculoviral IAP repeat containing 2 JBrowse link 11 102,347,182 102,378,670 RGD:1643526
G BIRC3 baculoviral IAP repeat containing 3 JBrowse link 11 102,317,373 102,339,403 RGD:1643526
G BIRC5 baculoviral IAP repeat containing 5 JBrowse link 17 78,214,253 78,225,635 RGD:2293108
RGD:11554173
RGD:2293102
G BIRC7 baculoviral IAP repeat containing 7 JBrowse link 20 63,235,905 63,240,495 RGD:11554173
G BMP4 bone morphogenetic protein 4 JBrowse link 14 53,949,736 53,956,891 RGD:1643589
G BMP6 bone morphogenetic protein 6 JBrowse link 6 7,726,099 7,881,728 RGD:7242419
G BMP7 bone morphogenetic protein 7 JBrowse link 20 57,168,753 57,266,641 RGD:1643589
G BSG basigin (Ok blood group) JBrowse link 19 571,283 583,493 RGD:2289052
G BTG2 BTG anti-proliferation factor 2 JBrowse link 1 203,305,519 203,309,602 RGD:2289069
G BTG3 BTG anti-proliferation factor 3 JBrowse link 21 17,593,653 17,612,940 RGD:11554173
G C4A complement C4A (Rodgers blood group) JBrowse link 6 31,982,057 32,002,681 RGD:5688259
G C4B complement C4B (Chido blood group) JBrowse link 6 32,014,795 32,035,418 RGD:5688259
G CA9 carbonic anhydrase 9 JBrowse link 9 35,673,809 35,681,159 RGD:2293201
RGD:2293198
RGD:2293199
RGD:2293191
G CAMK1 calcium/calmodulin dependent protein kinase I JBrowse link 3 9,757,345 9,769,987 RGD:8554872
G CAPG capping actin protein, gelsolin like JBrowse link 2 85,394,748 85,418,467 RGD:11554173
G CARD11 caspase recruitment domain family member 11 JBrowse link 7 2,906,075 3,043,867 RGD:11554173
G CASP2 caspase 2 JBrowse link 7 143,288,351 143,307,696 RGD:11554173
G CASP3 caspase 3 JBrowse link 4 184,627,696 184,649,475 RGD:2293308
G CAV1 caveolin 1 JBrowse link 7 116,525,009 116,561,185 RGD:2289107
G CCNB1 cyclin B1 JBrowse link 5 69,167,010 69,178,245 RGD:2315941
G CCND1 cyclin D1 JBrowse link 11 69,641,156 69,654,474 RGD:2289130
RGD:2289127
G CCND3 cyclin D3 JBrowse link 6 41,934,933 42,048,894 RGD:2316007
G CCNE1 cyclin E1 JBrowse link 19 29,811,991 29,824,312 RGD:2289228
G CD40 CD40 molecule JBrowse link 20 46,118,242 46,129,858 RGD:7248440
RGD:11522744
RGD:7248724
G CD44 CD44 molecule (Indian blood group) JBrowse link 11 35,139,168 35,232,402 RGD:2289360
RGD:2289351
G CD46 CD46 molecule JBrowse link 1 207,752,038 207,795,516 RGD:2293550
G CDC14B cell division cycle 14B JBrowse link 9 96,492,743 96,619,843 RGD:10059341
G CDH1 cadherin 1 JBrowse link 16 68,737,292 68,835,537 RGD:2289489
RGD:7242059
G CDK2 cyclin dependent kinase 2 JBrowse link 12 55,966,830 55,972,789 RGD:2293561
G CDK4 cyclin dependent kinase 4 JBrowse link 12 57,747,727 57,752,310 RGD:2293579
G CDKN1B cyclin dependent kinase inhibitor 1B JBrowse link 12 12,717,270 12,722,383 RGD:2289127
RGD:2293590
RGD:2293589
G CDKN2A cyclin dependent kinase inhibitor 2A JBrowse link 9 21,967,752 21,995,324 RGD:1298747
RGD:2289699
RGD:2289680
G CDKN2B cyclin dependent kinase inhibitor 2B JBrowse link 9 22,002,903 22,009,313 RGD:7248758
G CNN2 calponin 2 JBrowse link 19 1,026,608 1,039,065 RGD:11554173
G COMT catechol-O-methyltransferase JBrowse link 22 19,941,772 19,969,975 RGD:2289716
G CPQ carboxypeptidase Q JBrowse link 8 96,645,242 97,143,501 RGD:11554173
G CRABP1 cellular retinoic acid binding protein 1 JBrowse link 15 78,340,353 78,348,225 RGD:11554173
G CRADD CASP2 and RIPK1 domain containing adaptor with death domain JBrowse link 12 93,677,342 93,894,840 RGD:11554173
G CRP C-reactive protein JBrowse link 1 159,712,289 159,714,589 RGD:6904212
G CRYAB crystallin alpha B JBrowse link 11 111,908,564 111,923,740 RGD:11554173
G CSF1R colony stimulating factor 1 receptor JBrowse link 5 150,053,291 150,113,372 RGD:2299092
RGD:7257566
G CSMD3 CUB and Sushi multiple domains 3 JBrowse link 8 112,222,928 113,437,499 RGD:11554173
G CTLA4 cytotoxic T-lymphocyte associated protein 4 JBrowse link 2 203,867,771 203,873,965 RGD:7204723
G CTNNA1 catenin alpha 1 JBrowse link 5 138,753,386 138,935,034 RGD:2289799
G CTNNB1 catenin beta 1 JBrowse link 3 41,199,422 41,240,445 RGD:2289794
RGD:8554872
RGD:2289835
G CTSB cathepsin B JBrowse link 8 11,842,524 11,868,118 RGD:11554173
G CTSD cathepsin D JBrowse link 11 1,752,755 1,763,927 RGD:11554173
G CUL7 cullin 7 JBrowse link 6 43,037,617 43,053,945 RGD:11554173
G CXCR2 C-X-C motif chemokine receptor 2 JBrowse link 2 218,125,294 218,137,253 RGD:7257682
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 JBrowse link 15 74,719,542 74,725,528 RGD:7257729
RGD:7296938
RGD:7296939
RGD:7296937
G DAPK1 death associated protein kinase 1 JBrowse link 9 87,497,228 87,708,634 RGD:11554173
G DNHD1 dynein heavy chain domain 1 JBrowse link 11 6,497,280 6,572,025 RGD:11554173
G EBAG9 estrogen receptor binding site associated antigen 9 JBrowse link 8 109,539,700 109,565,996 RGD:2289852
G EEF2 eukaryotic translation elongation factor 2 JBrowse link 19 3,976,056 3,985,463 RGD:11554173
G EGFR epidermal growth factor receptor JBrowse link 7 55,019,017 55,211,628 RGD:2293730
G EGLN1 egl-9 family hypoxia inducible factor 1 JBrowse link 1 231,363,751 231,425,044 RGD:13504705
G EGLN2 egl-9 family hypoxia inducible factor 2 JBrowse link 19 40,799,191 40,808,434 RGD:13504705
G EGLN3 egl-9 family hypoxia inducible factor 3 JBrowse link 14 33,924,227 33,951,074 RGD:13506732
G ELOC elongin C JBrowse link 8 73,945,119 73,972,287 RGD:8554872
RGD:11554173
G EPAS1 endothelial PAS domain protein 1 JBrowse link 2 46,297,407 46,386,697 RGD:10395373
RGD:11554173
G ERBB2 erb-b2 receptor tyrosine kinase 2 JBrowse link 17 39,688,084 39,728,662 RGD:2289987
RGD:11554173
RGD:2289930
G ERBB4 erb-b2 receptor tyrosine kinase 4 JBrowse link 2 211,375,717 212,538,802 RGD:2289987
G FAAH2 fatty acid amide hydrolase 2 JBrowse link X 57,121,861 57,489,196 RGD:11554173
G FAM111B family with sequence similarity 111 member B JBrowse link 11 59,107,185 59,127,415 RGD:11554173
G FAS Fas cell surface death receptor JBrowse link 10 88,968,429 89,017,059 RGD:2290132
RGD:2290133
RGD:2290099
RGD:2290131
G FASLG Fas ligand JBrowse link 1 172,659,008 172,666,876 RGD:2290132
RGD:2290051
G FGF2 fibroblast growth factor 2 JBrowse link 4 122,826,708 122,898,236 RGD:2290303
G FGFR1 fibroblast growth factor receptor 1 JBrowse link 8 38,411,138 38,468,834 RGD:11352663
G FH fumarate hydratase JBrowse link 1 241,497,603 241,519,755 RGD:6907135
G FHIT fragile histidine triad diadenosine triphosphatase JBrowse link 3 59,747,277 61,251,461 RGD:2289903
RGD:2289870
G FLCN folliculin JBrowse link 17 17,206,946 17,237,188 RGD:7240710
RGD:8554872
RGD:13605606
RGD:1302869
RGD:11554173
G FLT1 fms related receptor tyrosine kinase 1 JBrowse link 13 28,300,346 28,495,128 RGD:2301250
RGD:11554173
RGD:2289960
G FMN2 formin 2 JBrowse link 1 240,091,883 240,475,187 RGD:11554173
G FN1 fibronectin 1 JBrowse link 2 215,360,440 215,436,167 RGD:7205637
G FPGT fucose-1-phosphate guanylyltransferase JBrowse link 1 74,198,212 74,208,702 RGD:11554173
G FRS2 fibroblast growth factor receptor substrate 2 JBrowse link 12 69,470,371 69,579,793 RGD:11352663
G GHRH growth hormone releasing hormone JBrowse link 20 37,251,086 37,261,817 RGD:2301426
G GJB1 gap junction protein beta 1 JBrowse link X 71,215,212 71,225,516 RGD:11554173
G GRB7 growth factor receptor bound protein 7 JBrowse link 17 39,737,938 39,747,285 RGD:11554173
G GSR glutathione-disulfide reductase JBrowse link 8 30,678,061 30,727,999 RGD:7257550
G GSTM1 glutathione S-transferase mu 1 JBrowse link 1 109,687,817 109,693,745 RGD:2293845
RGD:11554173
G GSTP1 glutathione S-transferase pi 1 JBrowse link 11 67,583,812 67,586,653 RGD:8547946
RGD:11554173
G GSTT1 glutathione S-transferase theta 1 RGD:2293845
RGD:11554173
G HARS1 histidyl-tRNA synthetase 1 JBrowse link 5 140,673,904 140,691,727 RGD:11554173
G HAVCR1 hepatitis A virus cellular receptor 1 JBrowse link 5 157,028,383 157,069,633 RGD:7245470
G HAVCR2 hepatitis A virus cellular receptor 2 JBrowse link 5 157,085,832 157,109,044 RGD:7245505
G HIF1A hypoxia inducible factor 1 subunit alpha JBrowse link 14 61,695,513 61,748,259 RGD:2306222
G HLA-DRB1 major histocompatibility complex, class II, DR beta 1 JBrowse link 6 32,578,769 32,589,836 RGD:2314704
RGD:2314695
RGD:2314701
G HNF1A HNF1 homeobox A JBrowse link 12 120,977,683 121,002,512 RGD:7240710
RGD:8554872
G HNF1B HNF1 homeobox B JBrowse link 17 37,686,431 37,745,059 RGD:7240710
G HOXB13 homeobox B13 JBrowse link 17 48,724,763 48,728,750 RGD:2314729
G HSPA9 heat shock protein family A (Hsp70) member 9 JBrowse link 5 138,553,756 138,575,401 RGD:11554173
G HSPB1 heat shock protein family B (small) member 1 JBrowse link 7 76,302,673 76,304,292 RGD:11554173
G HSPD1 heat shock protein family D (Hsp60) member 1 JBrowse link 2 197,486,584 197,500,274 RGD:11554173
G IFNA2 interferon alpha 2 JBrowse link 9 21,384,255 21,385,398 RGD:11554173
G IGF1R insulin like growth factor 1 receptor JBrowse link 15 98,648,539 98,964,530 RGD:7242846
G IGFBP3 insulin like growth factor binding protein 3 JBrowse link 7 45,912,245 45,921,272 RGD:2290003
G IGFBP7 insulin like growth factor binding protein 7 JBrowse link 4 57,030,773 57,110,385 RGD:1626565
G IL13 interleukin 13 JBrowse link 5 132,656,522 132,661,110 RGD:11554173
G IL1RN interleukin 1 receptor antagonist JBrowse link 2 113,099,365 113,134,016 RGD:6907413
G IL2 interleukin 2 JBrowse link 4 122,449,479 122,456,725 RGD:5147871
G IL4R interleukin 4 receptor JBrowse link 16 27,313,668 27,364,778 RGD:7207066
RGD:11554173
RGD:7207070
G IL6 interleukin 6 JBrowse link 7 22,725,889 22,732,002 RGD:11554173
G IL6R interleukin 6 receptor JBrowse link 1 154,405,193 154,469,450 RGD:11554173
G INPP4B inositol polyphosphate-4-phosphatase type II B JBrowse link 4 142,023,160 142,846,535 RGD:11554173
G INSR insulin receptor JBrowse link 19 7,112,257 7,294,414 RGD:2290462
G JUN Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 1 58,780,791 58,784,047 RGD:1549443
G JUP junction plakoglobin JBrowse link 17 41,754,607 41,786,768 RGD:2291890
RGD:2291866
G KANK1 KN motif and ankyrin repeat domains 1 JBrowse link 9 470,291 746,106 RGD:2315654
G KCNH1 potassium voltage-gated channel subfamily H member 1 JBrowse link 1 210,678,314 211,134,148 RGD:9693695
G KCNMA1 potassium calcium-activated channel subfamily M alpha 1 JBrowse link 10 76,869,601 77,637,969 RGD:11554173
G KDM4C lysine demethylase 4C JBrowse link 9 6,720,863 7,175,648 RGD:9587741
G KDM5C lysine demethylase 5C JBrowse link X 53,176,277 53,225,422 RGD:11554173
G KDM6A lysine demethylase 6A JBrowse link X 44,873,175 45,112,779 RGD:6907137
RGD:9587837
G KDM6B lysine demethylase 6B JBrowse link 17 7,834,210 7,854,796 RGD:9587837
G KDR kinase insert domain receptor JBrowse link 4 55,078,481 55,125,595 RGD:2301756
RGD:8552363
G KEAP1 kelch like ECH associated protein 1 JBrowse link 19 10,486,125 10,503,356 RGD:11554173
G KIT KIT proto-oncogene, receptor tyrosine kinase JBrowse link 4 54,657,928 54,740,715 RGD:2292421
RGD:2292414
G KLK6 kallikrein related peptidase 6 JBrowse link 19 50,958,631 50,969,598 RGD:2314864
G KRAS KRAS proto-oncogene, GTPase JBrowse link 12 25,205,246 25,250,929 RGD:2314914
G KRT32 keratin 32 JBrowse link 17 41,459,513 41,469,252 RGD:11554173
G KRT7 keratin 7 JBrowse link 12 52,233,243 52,252,667 RGD:11554173
G KRT8 keratin 8 JBrowse link 12 52,897,191 52,949,860 RGD:11554173
G L1CAM L1 cell adhesion molecule JBrowse link X 153,861,514 153,886,173 RGD:11554173
G LDHB lactate dehydrogenase B JBrowse link 12 21,635,342 21,657,971 RGD:11554173
G LEP leptin JBrowse link 7 128,241,201 128,257,629 RGD:6907119
G LMAN2L lectin, mannose binding 2 like JBrowse link 2 96,705,929 96,740,092 RGD:11554173
G LNPEP leucyl and cystinyl aminopeptidase JBrowse link 5 96,934,859 97,037,513 RGD:2314919
G LRP1B LDL receptor related protein 1B JBrowse link 2 140,231,423 142,132,463 RGD:11554173
G LRRK2 leucine rich repeat kinase 2 JBrowse link 12 40,224,890 40,369,285 RGD:11554173
G LTF lactotransferrin JBrowse link 3 46,435,645 46,485,234 RGD:7243106
G M6PR mannose-6-phosphate receptor, cation dependent JBrowse link 12 8,940,361 8,949,761 RGD:11554173
G MANF mesencephalic astrocyte derived neurotrophic factor JBrowse link 3 51,385,291 51,389,397 RGD:1599220
G MAP2K1 mitogen-activated protein kinase kinase 1 JBrowse link 15 66,386,912 66,491,544 RGD:2292629
RGD:2292630
G MAPK1 mitogen-activated protein kinase 1 JBrowse link 22 21,759,657 21,867,680 RGD:13504815
G MET MET proto-oncogene, receptor tyrosine kinase JBrowse link 7 116,672,196 116,798,386 RGD:1600122
RGD:11554173
G MGP matrix Gla protein JBrowse link 12 14,880,864 14,885,854 RGD:2293578
G MITF melanocyte inducing transcription factor JBrowse link 3 69,739,464 69,968,337 RGD:11554173
G MLH1 mutL homolog 1 JBrowse link 3 36,993,350 37,050,846 RGD:2293509
G MLLT10 MLLT10 histone lysine methyltransferase DOT1L cofactor JBrowse link 10 21,524,616 21,743,630 RGD:11554173
G MMP1 matrix metallopeptidase 1 JBrowse link 11 102,789,919 102,798,160 RGD:7207023
RGD:7207082
G MMP2 matrix metallopeptidase 2 JBrowse link 16 55,478,830 55,506,691 RGD:2290359
RGD:2290358
G MMP3 matrix metallopeptidase 3 JBrowse link 11 102,835,801 102,843,609 RGD:7207067
RGD:7241233
G MMP9 matrix metallopeptidase 9 JBrowse link 20 46,008,908 46,016,561 RGD:2290358
G MOK MOK protein kinase JBrowse link 14 102,224,441 102,305,191 RGD:7243170
G MSGN1 mesogenin 1 JBrowse link 2 17,816,460 17,817,798 RGD:11554173
G MSH2 mutS homolog 2 JBrowse link 2 47,403,067 47,634,501 RGD:2293509
RGD:8554872
G MTHFR methylenetetrahydrofolate reductase JBrowse link 1 11,785,723 11,806,103 RGD:6893654
G MTOR mechanistic target of rapamycin kinase JBrowse link 1 11,106,535 11,273,497 RGD:7207420
RGD:8554872
RGD:11554173
G MUC1 mucin 1, cell surface associated JBrowse link 1 155,185,824 155,192,915 RGD:7245968
G MUC4 mucin 4, cell surface associated JBrowse link 3 195,746,771 195,811,929 RGD:11554173
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 8 127,735,434 127,742,951 RGD:7207793
RGD:7207841
G NAV3 neuron navigator 3 JBrowse link 12 77,571,856 78,213,010 RGD:11554173
G NDRG1 N-myc downstream regulated 1 JBrowse link 8 133,237,175 133,297,252 RGD:11554173
G NF2 neurofibromin 2 JBrowse link 22 29,603,556 29,698,600 RGD:2315000
RGD:11554173
G NFE2L2 nuclear factor, erythroid 2 like 2 JBrowse link 2 177,230,303 177,265,131 RGD:8554872
G NLRP12 NLR family pyrin domain containing 12 JBrowse link 19 53,793,584 53,824,403 RGD:11554173
G NME1 NME/NM23 nucleoside diphosphate kinase 1 JBrowse link 17 51,153,559 51,162,089 RGD:2299059
G NNMT nicotinamide N-methyltransferase JBrowse link 11 114,257,806 114,313,536 RGD:2299120
G NR3C1 nuclear receptor subfamily 3 group C member 1 JBrowse link 5 143,277,931 143,435,512 RGD:7174727
RGD:7174733
G NRAS NRAS proto-oncogene, GTPase JBrowse link 1 114,704,469 114,716,771 RGD:8554872
G OGG1 8-oxoguanine DNA glycosylase JBrowse link 3 9,749,944 9,788,246 RGD:2317140
RGD:8554872
RGD:7240710
RGD:1600295
G OR4C13 olfactory receptor family 4 subfamily C member 13 JBrowse link 11 49,952,391 49,953,419 RGD:11554173
G PAK1 p21 (RAC1) activated kinase 1 JBrowse link 11 77,322,017 77,514,957 RGD:2299159
RGD:11554173
G PBRM1 polybromo 1 JBrowse link 3 52,545,367 52,685,913 RGD:6907137
RGD:11554173
G PCNA proliferating cell nuclear antigen JBrowse link 20 5,114,953 5,126,622 RGD:2315008
G PDCD1 programmed cell death 1 JBrowse link 2 241,849,881 241,858,908 RGD:7248680
G PDGFRA platelet derived growth factor receptor alpha JBrowse link 4 54,229,127 54,298,247 RGD:2292157
G PDGFRB platelet derived growth factor receptor beta JBrowse link 5 150,113,839 150,155,845 RGD:2292198
RGD:2290496
G PDHB pyruvate dehydrogenase E1 subunit beta JBrowse link 3 58,427,630 58,433,852 RGD:11554173
G PDPN podoplanin JBrowse link 1 13,583,757 13,617,957 RGD:2292239
G PDXDC1 pyridoxal dependent decarboxylase domain containing 1 JBrowse link 16 14,974,591 15,153,343 RGD:11554173
G PEBP1 phosphatidylethanolamine binding protein 1 JBrowse link 12 118,136,124 118,145,584 RGD:11554173
G PGF placental growth factor JBrowse link 14 74,941,830 74,955,764 RGD:13506645
G PGK1 phosphoglycerate kinase 1 JBrowse link X 78,104,248 78,129,295 RGD:11554173
G PIDD1 p53-induced death domain protein 1 JBrowse link 11 799,179 809,867 RGD:11554173
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha JBrowse link 3 179,148,114 179,240,093 RGD:8554872
RGD:11554173
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 JBrowse link 5 68,215,737 68,301,821 RGD:13504823
G PLAU plasminogen activator, urokinase JBrowse link 10 73,909,182 73,917,501 RGD:7241133
G PLD2 phospholipase D2 JBrowse link 17 4,807,152 4,823,432 RGD:2299898
G PMEPA1 prostate transmembrane protein, androgen induced 1 JBrowse link 20 57,648,392 57,711,536 RGD:2315108
G PNKD PNKD metallo-beta-lactamase domain containing JBrowse link 2 218,270,485 218,346,793 RGD:11554173
G POMC proopiomelanocortin JBrowse link 2 25,160,853 25,168,851 RGD:11554173
G PPAT phosphoribosyl pyrophosphate amidotransferase JBrowse link 4 56,393,362 56,435,615 RGD:5135050
G PRAME preferentially expressed antigen in melanoma JBrowse link 22 22,547,696 22,559,361 RGD:11554173
G PRCC proline rich mitotic checkpoint control factor JBrowse link 1 156,767,535 156,800,819 RGD:11554173
G PSMB9 proteasome 20S subunit beta 9 JBrowse link 6 32,854,192 32,859,851 RGD:9999148
G PTEN phosphatase and tensin homolog JBrowse link 10 87,863,625 87,971,930 RGD:2292513
RGD:8554872
RGD:11554173
RGD:12802360
RGD:1643331
RGD:2292500
G PTGS1 prostaglandin-endoperoxide synthase 1 JBrowse link 9 122,369,906 122,395,703 RGD:2300212
G PTGS2 prostaglandin-endoperoxide synthase 2 JBrowse link 1 186,671,791 186,680,423 RGD:2300204
RGD:11554173
RGD:2300212
G PVALB parvalbumin JBrowse link 22 36,800,703 36,819,499 RGD:11554173
G RASSF1 Ras association domain family member 1 JBrowse link 3 50,329,786 50,340,936 RGD:2299866
RGD:2291977
G RB1 RB transcriptional corepressor 1 JBrowse link 13 48,303,747 48,481,890 RGD:2299893
G RELA RELA proto-oncogene, NF-kB subunit JBrowse link 11 65,653,596 65,662,972 RGD:2298755
RGD:11554173
RGD:2298771
G RHEB Ras homolog, mTORC1 binding JBrowse link 7 151,466,012 151,519,895 RGD:8554872
G RNF139 ring finger protein 139 JBrowse link 8 124,474,880 124,488,618 RGD:1599629
RGD:7240710
RGD:2289870
G RPL14 ribosomal protein L14 JBrowse link 3 40,457,339 40,468,587 RGD:11554173
G RYR1 ryanodine receptor 1 JBrowse link 19 38,433,691 38,587,564 RGD:11554173
G SCARB1 scavenger receptor class B member 1 JBrowse link 12 124,776,856 124,863,864 RGD:11554173
G SDHB succinate dehydrogenase complex iron sulfur subunit B JBrowse link 1 17,018,722 17,054,032 RGD:6907134
RGD:8554872
G SDHD succinate dehydrogenase complex subunit D JBrowse link 11 112,086,873 112,095,794 RGD:6907134
G SETD2 SET domain containing 2, histone lysine methyltransferase JBrowse link 3 47,016,408 47,164,113 RGD:6907137
RGD:11554173
G SF3B1 splicing factor 3b subunit 1 JBrowse link 2 197,389,784 197,435,093 RGD:8554872
G SF3B2 splicing factor 3b subunit 2 JBrowse link 11 66,052,361 66,069,308 RGD:8554872
G SFRP1 secreted frizzled related protein 1 JBrowse link 8 41,261,962 41,309,473 RGD:4107084
G SFRP2 secreted frizzled related protein 2 JBrowse link 4 153,780,591 153,789,083 RGD:11554173
G SHANK1 SH3 and multiple ankyrin repeat domains 1 JBrowse link 19 50,659,255 50,719,802 RGD:11554173
G SKP2 S-phase kinase associated protein 2 JBrowse link 5 36,152,043 36,184,319 RGD:2315038
G SLC2A1 solute carrier family 2 member 1 JBrowse link 1 42,925,375 42,958,868 RGD:11554173
G SLC49A4 solute carrier family 49 member 4 JBrowse link 3 122,795,058 122,892,157 RGD:1601072
RGD:7240710
G SLC5A3 solute carrier family 5 member 3 JBrowse link 21 34,073,578 34,106,260 RGD:11554173
G SMAD2 SMAD family member 2 JBrowse link 18 47,808,957 47,931,188 RGD:2299973
G SMAD4 SMAD family member 4 JBrowse link 18 51,030,213 51,085,042 RGD:2299973
G SOD2 superoxide dismutase 2 JBrowse link 6 159,669,069 159,762,281 RGD:11554173
G SPARC secreted protein acidic and cysteine rich JBrowse link 5 151,661,096 151,686,915 RGD:2300025
G SPINK1 serine peptidase inhibitor Kazal type 1 JBrowse link 5 147,824,580 147,839,231 RGD:2300387
RGD:2300388
G SPTBN4 spectrin beta, non-erythrocytic 4 JBrowse link 19 40,467,001 40,576,464 RGD:11554173
G ST14 suppression of tumorigenicity 14 JBrowse link 11 130,159,782 130,210,362 RGD:2315090
G STAT3 signal transducer and activator of transcription 3 JBrowse link 17 42,313,324 42,388,502 RGD:2291917
RGD:2291913
G SYNE2 spectrin repeat containing nuclear envelope protein 2 JBrowse link 14 63,761,904 64,226,449 RGD:11554173
G TAGLN2 transgelin 2 JBrowse link 1 159,918,111 159,925,507 RGD:11554173
G TERC telomerase RNA component JBrowse link 3 169,764,610 169,765,060 RGD:2291972
G TERT telomerase reverse transcriptase JBrowse link 5 1,253,148 1,295,068 RGD:2291980
G TET2 tet methylcytosine dioxygenase 2 JBrowse link 4 105,145,875 105,279,803 RGD:11554173
G TFE3 transcription factor binding to IGHM enhancer 3 JBrowse link X 49,028,726 49,043,357 RGD:1599384
RGD:11554173
G TFRC transferrin receptor JBrowse link 3 196,018,694 196,082,123 RGD:2292025
RGD:2292024
G TGFB1 transforming growth factor beta 1 JBrowse link 19 41,330,323 41,353,922 RGD:11560966
RGD:13506175
RGD:13506173
G TGM2 transglutaminase 2 JBrowse link 20 38,127,385 38,166,508 RGD:11554173
G THRA thyroid hormone receptor alpha JBrowse link 17 40,062,193 40,093,867 RGD:2315097
G THRB thyroid hormone receptor beta JBrowse link 3 24,117,153 24,495,708 RGD:2315097
G TIMP1 TIMP metallopeptidase inhibitor 1 JBrowse link X 47,582,408 47,586,789 RGD:2290350
G TIMP2 TIMP metallopeptidase inhibitor 2 JBrowse link 17 78,852,977 78,925,387 RGD:2290359
RGD:2290358
G TIMP3 TIMP metallopeptidase inhibitor 3 JBrowse link 22 32,800,816 32,863,041 RGD:2290421
G TIMP4 TIMP metallopeptidase inhibitor 4 JBrowse link 3 12,153,068 12,158,912 RGD:2290421
G TLR9 toll like receptor 9 JBrowse link 3 52,221,080 52,226,163 RGD:7246915
G TNF tumor necrosis factor JBrowse link 6 31,575,565 31,578,336 RGD:2315119
RGD:2315113
G TNFRSF10A TNF receptor superfamily member 10a JBrowse link 8 23,190,452 23,225,102 RGD:2290496
RGD:2290491
G TNFRSF1A TNF receptor superfamily member 1A JBrowse link 12 6,328,771 6,342,076 RGD:5131437
G TNFRSF1B TNF receptor superfamily member 1B JBrowse link 1 12,166,948 12,209,222 RGD:7245512
G TNFSF10 TNF superfamily member 10 JBrowse link 3 172,505,508 172,523,430 RGD:11554173
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:2290544
RGD:8554872
RGD:11554173
G TP73 tumor protein p73 JBrowse link 1 3,652,516 3,736,201 RGD:2291837
G TSC1 TSC complex subunit 1 JBrowse link 9 132,891,349 132,945,269 RGD:11554173
G TSC2 TSC complex subunit 2 JBrowse link 16 2,047,804 2,089,491 RGD:11568655
RGD:68666
RGD:11568661
G TXNIP thioredoxin interacting protein JBrowse link 1 145,992,435 145,996,579 RGD:1642756
G TYMP thymidine phosphorylase JBrowse link 22 50,525,752 50,530,085 RGD:2293717
RGD:2293723
G UNC5C unc-5 netrin receptor C JBrowse link 4 95,162,504 95,549,210 RGD:11554173
G VDR vitamin D receptor JBrowse link 12 47,841,537 47,905,022 RGD:1331525
G VEGFA vascular endothelial growth factor A JBrowse link 6 43,770,209 43,786,487 RGD:2315455
G VEGFC vascular endothelial growth factor C JBrowse link 4 176,683,538 176,792,922 RGD:2315476
G VHL von Hippel-Lindau tumor suppressor JBrowse link 3 10,141,778 10,153,667 RGD:1580369
RGD:8554872
RGD:11554173
RGD:7240710
G VMO1 vitelline membrane outer layer 1 homolog JBrowse link 17 4,785,285 4,786,364 RGD:11554173
G VWF von Willebrand factor JBrowse link 12 5,948,874 6,124,675 RGD:7207032
G WIF1 WNT inhibitory factor 1 JBrowse link 12 65,050,626 65,121,305 RGD:2291869
G WNT11 Wnt family member 11 JBrowse link 11 76,186,325 76,210,842 RGD:2299947
G XIAP X-linked inhibitor of apoptosis JBrowse link X 123,859,812 123,913,979 RGD:2315854
G XRCC1 X-ray repair cross complementing 1 JBrowse link 19 43,543,311 43,575,527 RGD:2302577
G YIPF3 Yip1 domain family member 3 JBrowse link 6 43,511,832 43,516,926 RGD:11554173
G ZNF536 zinc finger protein 536 JBrowse link 19 30,224,236 30,713,586 RGD:11554173
G ZNF765 zinc finger protein 765 JBrowse link 19 53,395,133 53,427,321 RGD:11554173
G ZNF804A zinc finger protein 804A JBrowse link 2 184,598,529 184,939,492 RGD:11554173
chromophobe renal cell carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G HNF1A HNF1 homeobox A JBrowse link 12 120,977,683 121,002,512 RGD:8554872
G HNF1B HNF1 homeobox B JBrowse link 17 37,686,431 37,745,059 RGD:8554872
clear cell renal cell carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G AGER advanced glycosylation end-product specific receptor JBrowse link 6 32,180,968 32,184,380 RGD:7244181
G ATP5MC2 ATP synthase membrane subunit c locus 2 JBrowse link 12 53,665,160 53,677,546 RGD:14696810
G ATP5PB ATP synthase peripheral stalk-membrane subunit b JBrowse link 1 111,449,464 111,462,773 RGD:14696810
G ATP5PO ATP synthase peripheral stalk subunit OSCP JBrowse link 21 33,903,453 33,915,804 RGD:14696810
G BAX BCL2 associated X, apoptosis regulator JBrowse link 19 48,954,825 48,961,798 RGD:15036804
G DNMT1 DNA methyltransferase 1 JBrowse link 19 10,133,346 10,194,953 RGD:11554173
G DNMT3A DNA methyltransferase 3 alpha JBrowse link 2 25,227,874 25,342,590 RGD:11554173
G EGLN3 egl-9 family hypoxia inducible factor 3 JBrowse link 14 33,924,227 33,951,074 RGD:13506731
G ENG endoglin JBrowse link 9 127,815,012 127,854,773 RGD:7248775
RGD:7248780
G EP300 E1A binding protein p300 JBrowse link 22 41,092,592 41,180,077 RGD:7296925
RGD:15036804
G F2 coagulation factor II, thrombin JBrowse link 11 46,719,201 46,739,506 RGD:6893520
G FLT4 fms related receptor tyrosine kinase 4 JBrowse link 5 180,601,506 180,650,298 RGD:11554173
G GSTP1 glutathione S-transferase pi 1 JBrowse link 11 67,583,812 67,586,653 RGD:6906878
G HNF1A HNF1 homeobox A JBrowse link 12 120,977,683 121,002,512 RGD:8554872
G IGF1R insulin like growth factor 1 receptor JBrowse link 15 98,648,539 98,964,530 RGD:7242921
G KAT8 lysine acetyltransferase 8 JBrowse link 16 31,117,664 31,131,393 RGD:9586034
G MMP12 matrix metallopeptidase 12 JBrowse link 11 102,862,736 102,874,982 RGD:2290421
G MTHFR methylenetetrahydrofolate reductase JBrowse link 1 11,785,723 11,806,103 RGD:6893474
RGD:6893632
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 8 127,735,434 127,742,951 RGD:7207420
G OGG1 8-oxoguanine DNA glycosylase JBrowse link 3 9,749,944 9,788,246 RGD:8554872
G PAK4 p21 (RAC1) activated kinase 4 JBrowse link 19 39,125,786 39,182,816 RGD:13504816
G PAK6 p21 (RAC1) activated kinase 6 JBrowse link 15 40,239,063 40,277,487 RGD:13506722
G PBRM1 polybromo 1 JBrowse link 3 52,545,367 52,685,913 RGD:8554872
G PDGFB platelet derived growth factor subunit B JBrowse link 22 39,223,359 39,244,982 RGD:13504817
RGD:13506650
G SRSF1 serine and arginine rich splicing factor 1 JBrowse link 17 58,000,919 58,007,346 RGD:11039407
G SRSF2 serine and arginine rich splicing factor 2 JBrowse link 17 76,734,115 76,737,411 RGD:11039407
G SRSF4 serine and arginine rich splicing factor 4 JBrowse link 1 29,147,743 29,181,900 RGD:11039407
G SRSF5 serine and arginine rich splicing factor 5 JBrowse link 14 69,767,112 69,772,005 RGD:11039407
G SRSF6 serine and arginine rich splicing factor 6 JBrowse link 20 43,457,893 43,464,243 RGD:11039407
G SRSF7 serine and arginine rich splicing factor 7 JBrowse link 2 38,743,599 38,751,494 RGD:11039407
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:15036804
G VEGFA vascular endothelial growth factor A JBrowse link 6 43,770,209 43,786,487 RGD:11554173
hereditary renal cell carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G DNASE1 deoxyribonuclease 1 JBrowse link 16 3,611,737 3,665,472 RGD:8554872
G EGF epidermal growth factor JBrowse link 4 109,912,883 110,013,766 RGD:8554872
G PARP1 poly(ADP-ribose) polymerase 1 JBrowse link 1 226,360,691 226,408,093 RGD:8554872
G SDHA succinate dehydrogenase complex flavoprotein subunit A JBrowse link 5 218,223 264,816 RGD:8554872
G TRAP1 TNF receptor associated protein 1 JBrowse link 16 3,658,037 3,717,524 RGD:8554872
nonpapillary renal cell carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G CAMK1 calcium/calmodulin dependent protein kinase I JBrowse link 3 9,757,345 9,769,987 RGD:8554872
G FLCN folliculin JBrowse link 17 17,206,946 17,237,188 RGD:13592920
RGD:8554872
G HNF1A HNF1 homeobox A JBrowse link 12 120,977,683 121,002,512 RGD:13592920
RGD:8554872
G HNF1B HNF1 homeobox B JBrowse link 17 37,686,431 37,745,059 RGD:13592920
G OGG1 8-oxoguanine DNA glycosylase JBrowse link 3 9,749,944 9,788,246 RGD:8554872
RGD:13592920
G RNF139 ring finger protein 139 JBrowse link 8 124,474,880 124,488,618 RGD:13592920
G SLC49A4 solute carrier family 49 member 4 JBrowse link 3 122,795,058 122,892,157 RGD:13592920
G VHL von Hippel-Lindau tumor suppressor JBrowse link 3 10,141,778 10,153,667 RGD:13592920
papillary renal cell carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G APC APC regulator of WNT signaling pathway JBrowse link 5 112,707,498 112,846,239 RGD:8554872
G ARAF A-Raf proto-oncogene, serine/threonine kinase JBrowse link X 47,561,100 47,571,921 RGD:8554872
G ASZ1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 JBrowse link 7 117,363,222 117,427,493 RGD:8554872
G ATM ATM serine/threonine kinase JBrowse link 11 108,222,484 108,369,102 RGD:8554872
G BRAF B-Raf proto-oncogene, serine/threonine kinase JBrowse link 7 140,719,331 140,924,929 RGD:8554872
G CAPZA2 capping actin protein of muscle Z-line subunit alpha 2 JBrowse link 7 116,862,587 116,922,049 RGD:8554872
G CDKN2A cyclin dependent kinase inhibitor 2A JBrowse link 9 21,967,752 21,995,324 RGD:8554872
G CFTR CF transmembrane conductance regulator JBrowse link 7 117,480,025 117,668,665 RGD:8554872
G COMETT cytosolic oncogenic antisense to MET transcript JBrowse link 7 116,563,594 116,688,027 RGD:8554872
G CTNNB1 catenin beta 1 JBrowse link 3 41,199,422 41,240,445 RGD:8554872
G ELOC elongin C JBrowse link 8 73,945,119 73,972,287 RGD:8554872
G ERBB2 erb-b2 receptor tyrosine kinase 2 JBrowse link 17 39,688,084 39,728,662 RGD:8554872
G FBXW7 F-box and WD repeat domain containing 7 JBrowse link 4 152,320,544 152,536,873 RGD:8554872
G FGFR3 fibroblast growth factor receptor 3 JBrowse link 4 1,793,293 1,808,872 RGD:8554872
G HRAS HRas proto-oncogene, GTPase JBrowse link 11 532,242 535,576 RGD:8554872
G LRRC56 leucine rich repeat containing 56 JBrowse link 11 518,967 554,916 RGD:8554872
G MET MET proto-oncogene, receptor tyrosine kinase JBrowse link 7 116,672,196 116,798,386 RGD:8554872
RGD:7240710
G MIR6132 microRNA 6132 JBrowse link 7 117,020,211 117,020,319 RGD:8554872
G MLH1 mutL homolog 1 JBrowse link 3 36,993,350 37,050,846 RGD:8554872
G MSH2 mutS homolog 2 JBrowse link 2 47,403,067 47,634,501 RGD:8554872
G MTOR mechanistic target of rapamycin kinase JBrowse link 1 11,106,535 11,273,497 RGD:8554872
G NFE2L2 nuclear factor, erythroid 2 like 2 JBrowse link 2 177,230,303 177,265,131 RGD:8554872
G NRAS NRAS proto-oncogene, GTPase JBrowse link 1 114,704,469 114,716,771 RGD:8554872
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha JBrowse link 3 179,148,114 179,240,093 RGD:8554872
G PRCC proline rich mitotic checkpoint control factor JBrowse link 1 156,767,535 156,800,819 RGD:7240710
G PTEN phosphatase and tensin homolog JBrowse link 10 87,863,625 87,971,930 RGD:8554872
G RHEB Ras homolog, mTORC1 binding JBrowse link 7 151,466,012 151,519,895 RGD:8554872
G SDHB succinate dehydrogenase complex iron sulfur subunit B JBrowse link 1 17,018,722 17,054,032 RGD:8554872
G SF3B1 splicing factor 3b subunit 1 JBrowse link 2 197,389,784 197,435,093 RGD:8554872
G SF3B2 splicing factor 3b subunit 2 JBrowse link 11 66,052,361 66,069,308 RGD:8554872
G ST7 suppression of tumorigenicity 7 JBrowse link 7 116,953,501 117,230,176 RGD:8554872
G ST7-AS1 ST7 antisense RNA 1 JBrowse link 7 116,952,446 116,954,334 RGD:8554872
G ST7-AS2 ST7 antisense RNA 2 JBrowse link 7 117,072,072 117,145,592 RGD:8554872
G ST7-OT3 ST7 overlapping transcript 3 JBrowse link 7 117,182,681 117,209,937 RGD:8554872
G ST7-OT4 ST7 overlapping transcript 4 JBrowse link 7 116,953,848 116,959,817 RGD:8554872
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:8554872
G VHL von Hippel-Lindau tumor suppressor JBrowse link 3 10,141,778 10,153,667 RGD:8554872
G WNT2 Wnt family member 2 JBrowse link 7 117,275,451 117,323,058 RGD:8554872
Renal Cell Carcinoma, Xp11-Associated term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G TFE3 transcription factor binding to IGHM enhancer 3 JBrowse link X 49,028,726 49,043,357 RGD:7240710
Sporadic Papillary Renal Cell Carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G ARAF A-Raf proto-oncogene, serine/threonine kinase JBrowse link X 47,561,100 47,571,921 RGD:8554872
G BRAF B-Raf proto-oncogene, serine/threonine kinase JBrowse link 7 140,719,331 140,924,929 RGD:8554872
G CDKN2A cyclin dependent kinase inhibitor 2A JBrowse link 9 21,967,752 21,995,324 RGD:8554872
G ERBB2 erb-b2 receptor tyrosine kinase 2 JBrowse link 17 39,688,084 39,728,662 RGD:8554872
G FBXW7 F-box and WD repeat domain containing 7 JBrowse link 4 152,320,544 152,536,873 RGD:8554872
G FGFR3 fibroblast growth factor receptor 3 JBrowse link 4 1,793,293 1,808,872 RGD:8554872
G HRAS HRas proto-oncogene, GTPase JBrowse link 11 532,242 535,576 RGD:8554872
G LRRC56 leucine rich repeat containing 56 JBrowse link 11 518,967 554,916 RGD:8554872
G MTOR mechanistic target of rapamycin kinase JBrowse link 1 11,106,535 11,273,497 RGD:8554872
G MYC MYC proto-oncogene, bHLH transcription factor JBrowse link 8 127,735,434 127,742,951 RGD:7240562
RGD:7240563
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha JBrowse link 3 179,148,114 179,240,093 RGD:8554872
G RHEB Ras homolog, mTORC1 binding JBrowse link 7 151,466,012 151,519,895 RGD:8554872
G TP53 tumor protein p53 JBrowse link 17 7,668,402 7,687,550 RGD:8554872

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16489
    disease of cellular proliferation 6562
      cancer 4411
        cell type cancer 3291
          carcinoma 1953
            adenocarcinoma 1338
              renal cell carcinoma 345
                Papillary Thyroid Carcinoma, with Papillary Renal Neoplasia 0
                Renal Cell Carcinoma 1 0
                Renal Cell Carcinoma, Xp11-Associated 1
                childhood kidney cell carcinoma 0
                chromophobe renal cell carcinoma + 2
                clear cell renal cell carcinoma 32
                collecting duct carcinoma 0
                hereditary renal cell carcinoma + 13
                mucinous tubular and spindle renal cell carcinoma 0
                multilocular clear cell renal cell carcinoma 0
                papillary renal cell carcinoma + 39
                sarcomatoid renal cell carcinoma 0
Path 2
Term Annotations click to browse term
  disease 16489
    disease of cellular proliferation 6562
      Neoplasms by Site 5748
        Urogenital Neoplasms 2387
          Urologic Neoplasms 633
            urinary system cancer 585
              kidney cancer 405
                renal carcinoma 351
                  renal cell carcinoma 345
                    Papillary Thyroid Carcinoma, with Papillary Renal Neoplasia 0
                    Renal Cell Carcinoma 1 0
                    Renal Cell Carcinoma, Xp11-Associated 1
                    childhood kidney cell carcinoma 0
                    chromophobe renal cell carcinoma + 2
                    clear cell renal cell carcinoma 32
                    collecting duct carcinoma 0
                    hereditary renal cell carcinoma + 13
                    mucinous tubular and spindle renal cell carcinoma 0
                    multilocular clear cell renal cell carcinoma 0
                    papillary renal cell carcinoma + 39
                    sarcomatoid renal cell carcinoma 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.