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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:spinal cancer
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Accession:DOID:5612 term browser browse the term
Definition:A central nervous system cancer that is located_in the spinal cord. It is mostly formed from metastases from primary cancers elsewhere (commonly breast, prostate, and lung cancer). (DO)
Synonyms:exact_synonym: intraspinal tumor;   malignant tumor of the spinal cord;   spinal cord cancer;   spinal cord neoplasm;   tumor of the spinal cord
 primary_id: RDO:9004353
 xref: ICD10CM:C72.0;   ICD9CM:192.2;   NCI:C3381;   NCI:C3572
For additional species annotation, visit the Alliance of Genome Resources.


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adult spinal cord ependymoma term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd6 chromodomain helicase DNA binding protein 6 ISO ClinVar Annotator: match by term: Adult Spinal Cord Ependymoma ClinVar NCBI chr 3:156,937,746...157,099,328
Ensembl chr 3:156,937,733...157,099,306
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Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16108
    disease of cellular proliferation 5913
      cancer 4236
        organ system cancer 4061
          nervous system cancer 1607
            central nervous system cancer 1291
              spinal cancer 1
                cauda equina neoplasm + 0
                childhood spinal cord tumor 0
                conus medullaris neoplasm 0
                epidural spinal canal neoplasm 0
                neurofibroma of spinal cord 0
                spinal canal and spinal cord meningioma + 0
                spinal canal intradural extramedullary neoplasm 0
                spinal cord dermoid cyst 0
                spinal cord glioma + 1
                spinal cord intramedullary teratoma 0
                spinal cord lymphoma 0
                spinal cord melanoma 0
                spinal cord primitive neuroectodermal neoplasm + 0
                spinal cord sarcoma 0
                spinal meninges cancer 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.