ONTOLOGY REPORT - ANNOTATIONS


Term:adenoma
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Accession:DOID:657 term browser browse the term
Definition:A benign epithelial tumor with a glandular organization.
Synonyms:exact_synonym: Basal Cell Adenomas;   Monomorphic Adenoma;   Monomorphic Adenomas;   acinar cell adenoma;   acinic cell adenoma;   adenomas;   basal cell adenoma;   trabecular adenoma;   trabecular adenomas
 primary_id: MESH:D000236
 alt_id: RDO:0002412
For additional species annotation, visit the Alliance of Genome Resources.


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adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcg2 ATP binding cassette subfamily G member 2 JBrowse link 4 88,765,441 88,890,268 RGD:11554173
G Aip aryl-hydrocarbon receptor-interacting protein JBrowse link 1 219,361,859 219,373,924 RGD:11554173
G Alox5 arachidonate 5-lipoxygenase JBrowse link 4 148,398,004 148,446,308 RGD:11554173
G Amacr alpha-methylacyl-CoA racemase JBrowse link 2 60,949,276 60,961,342 RGD:11554173
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:2317202
RGD:11554173
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 JBrowse link 2 204,003,742 204,032,023 RGD:11554173
G Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 JBrowse link 10 59,528,849 59,560,440 RGD:11554173
G Atp2b3 ATPase plasma membrane Ca2+ transporting 3 JBrowse link X 157,236,400 157,312,028 RGD:11554173
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:11554173
G Bcl2l1 Bcl2-like 1 JBrowse link 3 148,259,594 148,314,191 RGD:11554173
G Cacna1d calcium voltage-gated channel subunit alpha1 D JBrowse link 16 6,110,294 6,405,022 RGD:11554173
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:11554173
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 JBrowse link 6 2,308,179 2,316,739 RGD:11554173
G Efemp1 EGF containing fibulin extracellular matrix protein 1 JBrowse link 14 113,202,382 113,294,993 RGD:10401654
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:8694118
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:11554173
G Gjb1 gap junction protein, beta 1 JBrowse link X 71,272,030 71,279,973 RGD:11554173
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:11554173
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:2317273
G Kcnj5 potassium voltage-gated channel subfamily J member 5 JBrowse link 8 33,435,493 33,463,410 RGD:11554173
G Klf5 Kruppel-like factor 5 JBrowse link 15 83,703,796 83,722,921 RGD:1304288
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:11554173
G Men1 menin 1 JBrowse link 1 221,704,394 221,710,343 RGD:2317273
G Mir144 microRNA 144 JBrowse link 10 65,291,365 65,291,447 RGD:11554173
G Mir345 microRNA 345 JBrowse link 6 132,748,968 132,749,063 RGD:11554173
G Mir425 microRNA 425 JBrowse link 8 117,354,821 117,354,903 RGD:11554173
G Mir497 microRNA 497 JBrowse link 10 56,844,977 56,845,045 RGD:11554173
G Mir500 microRNA 500 JBrowse link X 16,121,332 16,121,411 RGD:11554173
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase JBrowse link 1 37,743,089 37,774,485 RGD:11554173
G Muc2 mucin 2, oligomeric mucus/gel-forming JBrowse link 1 214,663,929 214,693,197 RGD:11554173
G Ncam1 neural cell adhesion molecule 1 JBrowse link 8 53,836,797 54,134,881 RGD:2326070
G Nf1 neurofibromin 1 JBrowse link 10 66,732,460 66,928,706 RGD:11554173
G Prl prolactin JBrowse link 17 39,814,236 39,824,299 RGD:11554173
G Ptma prothymosin alpha JBrowse link 9 93,545,396 93,549,436 RGD:11554173
G Selenop selenoprotein P JBrowse link 2 53,105,912 53,116,198 RGD:11554173
G Slc19a1 solute carrier family 19 member 1 JBrowse link 20 12,334,675 12,354,517 RGD:11554173
G Suz12 SUZ12 polycomb repressive complex 2 subunit JBrowse link 10 67,325,101 67,371,588 RGD:11554173
G Tcn2 transcobalamin 2 JBrowse link 14 84,173,992 84,189,299 RGD:11554173
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:11554173
G Trpm7 transient receptor potential cation channel, subfamily M, member 7 JBrowse link 3 119,258,189 119,347,084 RGD:11554173
G Tshr thyroid stimulating hormone receptor JBrowse link 6 115,170,290 115,306,871 RGD:11554173
G Txnrd1 thioredoxin reductase 1 JBrowse link 7 26,946,124 26,984,400 RGD:11554173
G Vhl von Hippel-Lindau tumor suppressor JBrowse link 4 145,580,869 145,587,835 RGD:11554173
ACTH-secreting pituitary adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aip aryl-hydrocarbon receptor-interacting protein JBrowse link 1 219,361,859 219,373,924 RGD:8554872
RGD:11554173
G Bmp4 bone morphogenetic protein 4 JBrowse link 15 20,776,060 20,791,013 RGD:11554173
G Gnai2 G protein subunit alpha i2 JBrowse link 8 116,370,730 116,391,337 RGD:8554872
G Gnas GNAS complex locus JBrowse link 3 172,374,957 172,434,988 RGD:8554872
G Usp8 ubiquitin specific peptidase 8 JBrowse link 3 119,173,818 119,222,499 RGD:11554173
RGD:7240710
Adenomatous Polyps term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:11554173
G Cdx2 caudal type homeo box 2 JBrowse link 12 9,464,026 9,470,565 RGD:734757
G Defa5 defensin alpha 5 JBrowse link 16 75,338,050 75,340,401 RGD:11554173
Attenuated Adenomatous Polyposis Coli term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:8554872
G Galnt12 polypeptide N-acetylgalactosaminyltransferase 12 JBrowse link 5 62,718,733 62,751,345 RGD:8554872
chromosome 10q23 deletion syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmpr1a bone morphogenetic protein receptor type 1A JBrowse link 16 10,758,278 10,852,170 RGD:13592920
colon adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chka choline kinase alpha JBrowse link 1 219,076,618 219,126,221 RGD:10401945
G F5 coagulation factor V JBrowse link 13 82,479,997 82,535,540 RGD:10449102
G Rac1 Rac family small GTPase 1 JBrowse link 12 13,090,316 13,111,841 RGD:13432048
colorectal adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:8554872
G Birc7 baculoviral IAP repeat-containing 7 JBrowse link 3 176,438,335 176,443,864 RGD:13217408
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:13210753
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:7495820
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:7495820
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:13210753
G Mapk8 mitogen-activated protein kinase 8 JBrowse link 16 9,620,854 9,709,342 RGD:13217408
RGD:13217413
G Mir224 microRNA 224 JBrowse link X 152,223,754 152,223,835 RGD:14398749
G Odc1 ornithine decarboxylase 1 JBrowse link 6 42,852,529 42,859,142 RGD:8554872
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase JBrowse link 4 147,532,040 147,592,769 RGD:13217408
G Tnfrsf1a TNF receptor superfamily member 1A JBrowse link 4 157,864,905 157,877,634 RGD:13217413
cystadenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aldoa aldolase, fructose-bisphosphate A JBrowse link 1 198,228,387 198,233,988 RGD:2325696
familial adenomatous polyposis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:11554173
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:2293188
RGD:8554872
RGD:11554173
RGD:1601201
RGD:1331525
G ApcPirc APC, WNT signaling pathway regulator; polyposis in the rat colon RGD:1601201
G Cd44 CD44 molecule (Indian blood group) JBrowse link 3 92,695,083 92,783,820 RGD:11554173
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 JBrowse link 1 256,382,861 256,386,729 RGD:11554173
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:11554173
G F5 coagulation factor V JBrowse link 13 82,479,997 82,535,540 RGD:11554173
G Fmo3 flavin containing dimethylaniline monoxygenase 3 JBrowse link 13 80,837,418 80,856,214 RGD:11554173
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link 3 105,203,309 105,214,989 RGD:11554173
G Hdac2 histone deacetylase 2 JBrowse link 20 43,084,870 43,108,198 RGD:9590246
G Ihh Indian hedgehog signaling molecule JBrowse link 9 82,208,223 82,214,440 RGD:11528847
G Itih4 inter-alpha-trypsin inhibitor heavy chain 4 JBrowse link 16 6,970,367 6,985,538 RGD:11554173
G Lrg1 leucine-rich alpha-2-glycoprotein 1 JBrowse link 9 10,952,424 10,954,664 RGD:11554173
G Mcc MCC regulator of WNT signaling pathway JBrowse link 18
1
35,683,185
12,006,663
35,817,117
12,128,849
RGD:11554173
G Msh3 mutS homolog 3 JBrowse link 2 21,790,048 21,931,791 RGD:11554173
G Mutyh mutY DNA glycosylase JBrowse link 5 135,663,328 135,675,348 RGD:1600191
RGD:8554872
RGD:11554173
G Nthl1 nth-like DNA glycosylase 1 JBrowse link 10 13,996,660 14,002,827 RGD:11554173
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:11554173
G Reep5 receptor accessory protein 5 JBrowse link 18 27,128,462 27,159,693 RGD:8554872
G Scg5 secretogranin V JBrowse link 3 105,235,065 105,279,475 RGD:8554872
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:11554173
G Srp19 signal recognition particle 19 JBrowse link 18 27,114,822 27,121,062 RGD:8554872
G Toe1 target of EGR1, exonuclease JBrowse link 5 135,659,733 135,663,299 RGD:8554872
familial adenomatous polyposis 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:8554872
RGD:7240710
G Reep5 receptor accessory protein 5 JBrowse link 18 27,128,462 27,159,693 RGD:8554872
G Srp19 signal recognition particle 19 JBrowse link 18 27,114,822 27,121,062 RGD:8554872
familial adenomatous polyposis 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mutyh mutY DNA glycosylase JBrowse link 5 135,663,328 135,675,348 RGD:7240710
RGD:8554872
familial adenomatous polyposis 3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nthl1 nth-like DNA glycosylase 1 JBrowse link 10 13,996,660 14,002,827 RGD:8554872
RGD:7240710
familial adenomatous polyposis 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Msh3 mutS homolog 3 JBrowse link 2 21,790,048 21,931,791 RGD:8554872
RGD:7240710
Familial Hepatic Adenomas term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hnf1a HNF1 homeobox A JBrowse link 12 47,407,811 47,433,342 RGD:8554872
RGD:7240710
Familial Isolated Pituitary Adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aip aryl-hydrocarbon receptor-interacting protein JBrowse link 1 219,361,859 219,373,924 RGD:8554872
follicular adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Men1 menin 1 JBrowse link 1 221,704,394 221,710,343 RGD:8554872
G Minpp1 multiple inositol-polyphosphate phosphatase 1 JBrowse link 1 251,045,352 251,071,045 RGD:8554872
Gardner Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:8554872
Gastric Polyposis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:8554872
growth hormone secreting pituitary adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aip aryl-hydrocarbon receptor-interacting protein JBrowse link 1 219,361,859 219,373,924 RGD:7240710
RGD:8554872
G Cdh23 cadherin-related 23 JBrowse link 20 29,857,018 30,263,758 RGD:8554872
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:8662821
G Gh1 growth hormone 1 JBrowse link 10 94,486,204 94,488,181 RGD:11554173
G Gnas GNAS complex locus JBrowse link 3 172,374,957 172,434,988 RGD:8554872
RGD:11554173
G Gpr101 G protein-coupled receptor 101 JBrowse link X 140,296,220 140,303,743 RGD:11554173
G Hpgd 15-hydroxyprostaglandin dehydrogenase JBrowse link 16 37,457,134 37,495,758 RGD:11667097
G Men1 menin 1 JBrowse link 1 221,704,394 221,710,343 RGD:13592920
RGD:8554872
G Prl prolactin JBrowse link 17 39,814,236 39,824,299 RGD:11554173
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:11667097
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 JBrowse link 12 40,895,515 40,955,999 RGD:8554872
hepatocellular adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G A2m alpha-2-macroglobulin JBrowse link 4 154,309,426 154,359,138 RGD:1358261
RGD:11554173
G Carm1 coactivator-associated arginine methyltransferase 1 JBrowse link 8 22,577,723 22,622,555 RGD:9586718
G Cdkn1b cyclin-dependent kinase inhibitor 1B JBrowse link 4 168,689,043 168,694,159 RGD:11554173
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:11554173
G Cyp3a23/3a1 cytochrome P450, family 3, subfamily a, polypeptide 23/polypeptide 1 JBrowse link 12 11,053,888 11,082,742 RGD:11554173
G Hp haptoglobin JBrowse link 19 42,096,255 42,100,805 RGD:1626391
G Hras HRas proto-oncogene, GTPase JBrowse link 1 214,178,404 214,181,841 RGD:11554173
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:11568697
G Nr1i3 nuclear receptor subfamily 1, group I, member 3 JBrowse link 13 89,585,072 89,591,278 RGD:11554173
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:1302555
RGD:11554173
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 JBrowse link 12 40,895,515 40,955,999 RGD:13592920
G Tmem70 transmembrane protein 70 JBrowse link 5 2,019,852 2,037,038 RGD:11554173
G Ube2e2 ubiquitin-conjugating enzyme E2E 2 JBrowse link 15 7,402,210 7,928,320 RGD:11554173
Hereditary Desmoid Disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:7240710
RGD:8554872
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:8554872
Hereditary Mixed Polyposis Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Grem1 gremlin 1, DAN family BMP antagonist JBrowse link 3 105,203,309 105,214,989 RGD:8554872
Hereditary Mixed Polyposis Syndrome 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Scg5 secretogranin V JBrowse link 3 105,235,065 105,279,475 RGD:8554872
Hereditary Mixed Polyposis Syndrome 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bmpr1a bone morphogenetic protein receptor type 1A JBrowse link 16 10,758,278 10,852,170 RGD:7240710
RGD:8554872
Hyperparathyroidism 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G B3galt2 Beta-1,3-galactosyltransferase 2 JBrowse link 13 60,435,946 60,444,957 RGD:8554872
G Cdc73 cell division cycle 73 JBrowse link 13 60,403,771 60,496,511 RGD:8554872
RGD:7240710
insulinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adm adrenomedullin JBrowse link 1 175,443,189 175,447,260 RGD:2325319
G Btc betacellulin JBrowse link 14 18,231,854 18,270,621 RGD:2326087
G Cd40 CD40 molecule JBrowse link 3 161,519,789 161,534,943 RGD:5491180
G Cxcl12 C-X-C motif chemokine ligand 12 JBrowse link 4 149,261,044 149,273,891 RGD:2317608
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:2317266
RGD:2317268
G Men1 menin 1 JBrowse link 1 221,704,394 221,710,343 RGD:2317292
RGD:11554173
RGD:2317288
RGD:2317310
G Ncam1 neural cell adhesion molecule 1 JBrowse link 8 53,836,797 54,134,881 RGD:2326080
G Rps15 ribosomal protein S15 JBrowse link 7 12,282,134 12,283,573 RGD:61740
G Slc2a2 solute carrier family 2 member 2 JBrowse link 2 114,413,427 114,445,418 RGD:2324976
RGD:2324977
G Tgfa transforming growth factor alpha JBrowse link 4 117,961,877 118,045,923 RGD:2317472
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:2325017
Islet Cell Adenomatosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mafa MAF bZIP transcription factor A JBrowse link 7 116,779,368 116,781,815 RGD:8554872
malignant mesothelioma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif, 2 JBrowse link 10 36,098,051 36,304,416 RGD:11554173
G Ago1 argonaute RISC component 1 JBrowse link 5 144,444,390 144,479,430 RGD:11554173
G Ago2 argonaute RISC catalytic component 2 JBrowse link 7 114,339,607 114,377,277 RGD:11554173
G Anxa2 annexin A2 JBrowse link 8 75,687,134 75,723,589 RGD:11554173
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:11554173
G Bap1 Brca1 associated protein 1 JBrowse link 16 7,336,685 7,345,511 RGD:9586039
RGD:11554173
G Bcl10 BCL10, immune signaling adaptor JBrowse link 2 251,805,392 251,814,957 RGD:7240710
RGD:8554872
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:11554173
G C9 complement C9 JBrowse link 2 55,775,562 55,823,807 RGD:11554173
G Calb2 calbindin 2 JBrowse link 19 41,482,743 41,509,617 RGD:11554173
G Ccl27 C-C motif chemokine ligand 27 JBrowse link 5 58,159,066 58,166,182 RGD:11554173
G Ccl3 C-C motif chemokine ligand 3 JBrowse link 10 70,869,516 70,871,066 RGD:11554173
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:11554173
G Ccl6 chemokine (C-C motif) ligand 6 JBrowse link 10 70,798,118 70,802,750 RGD:11554173
G Ccl7 C-C motif chemokine ligand 7 JBrowse link 10 69,423,083 69,424,933 RGD:11554173
G Ccne2 cyclin E2 JBrowse link 5 24,434,077 24,446,406 RGD:11554173
G Cd40 CD40 molecule JBrowse link 3 161,519,789 161,534,943 RGD:11522742
G Cdk6 cyclin-dependent kinase 6 JBrowse link 4 27,781,728 27,969,653 RGD:11554173
G Cdkn1a cyclin-dependent kinase inhibitor 1A JBrowse link 20 6,348,422 6,358,864 RGD:11554173
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:11554173
G Cfap45 cilia and flagella associated protein 45 JBrowse link 13 90,909,551 90,932,958 RGD:11554173
G Clec11a C-type lectin domain containing 11A JBrowse link 1 100,290,374 100,293,515 RGD:11554173
G Col12a1 collagen type XII alpha 1 chain JBrowse link 8 87,042,820 87,150,701 RGD:11554173
G Copg1 coatomer protein complex, subunit gamma 1 JBrowse link 4 119,815,041 119,840,997 RGD:11554173
G Csf1 colony stimulating factor 1 JBrowse link 2 210,522,370 210,550,546 RGD:11554173
G Ctnnb1 catenin beta 1 JBrowse link 8 129,601,511 129,628,378 RGD:11554173
G Cxcl12 C-X-C motif chemokine ligand 12 JBrowse link 4 149,261,044 149,273,891 RGD:11554173
G Cxcl13 C-X-C motif chemokine ligand 13 JBrowse link 14 15,253,146 15,258,221 RGD:11554173
G Cxcl9 C-X-C motif chemokine ligand 9 JBrowse link 14 17,228,832 17,233,743 RGD:11554173
G Ddx3x DEAD-box helicase 3, X-linked JBrowse link X 10,400,363 10,414,010 RGD:11554173
G Ddx51 DEAD-box helicase 51 JBrowse link 12 52,067,183 52,072,249 RGD:11554173
G Efemp1 EGF containing fibulin extracellular matrix protein 1 JBrowse link 14 113,202,382 113,294,993 RGD:11554173
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:11554173
G Enox2 ecto-NOX disulfide-thiol exchanger 2 JBrowse link X 135,918,938 136,303,267 RGD:11554173
G Ephx1 epoxide hydrolase 1 JBrowse link 13 99,271,390 99,300,580 RGD:11554173
G F9 coagulation factor IX JBrowse link X 143,097,507 143,141,791 RGD:11554173
G Fgd6 FYVE, RhoGEF and PH domain containing 6 JBrowse link 7 34,951,878 35,063,006 RGD:11554173
G Fgf18 fibroblast growth factor 18 JBrowse link 10 18,047,109 18,082,290 RGD:11554173
G Fgf9 fibroblast growth factor 9 JBrowse link 15 38,341,657 38,386,945 RGD:11554173
G Fn1 fibronectin 1 JBrowse link 9 78,900,111 78,969,018 RGD:11554173
G Fth1 ferritin heavy chain 1 JBrowse link 1 226,030,940 226,033,228 RGD:11554173
G Gpr27 G protein-coupled receptor 27 JBrowse link 4 132,137,793 132,138,926 RGD:11554173
G Gpr37 G protein-coupled receptor 37 JBrowse link 4 51,822,163 51,844,228 RGD:11554173
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:7495814
RGD:11554173
G Hdac4 histone deacetylase 4 JBrowse link 9 99,052,945 99,299,715 RGD:11554173
G Heph hephaestin JBrowse link X 65,377,313 65,658,479 RGD:11554173
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:11554173
G Icam2 intercellular adhesion molecule 2 JBrowse link 10 94,569,889 94,581,218 RGD:11554173
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:11554173
G Igf2bp3 insulin-like growth factor 2 mRNA binding protein 3 JBrowse link 4 78,744,683 78,879,457 RGD:11554173
G Il12b interleukin 12B JBrowse link 10 30,034,447 30,048,774 RGD:11554173
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:11554173
G Il2ra interleukin 2 receptor subunit alpha JBrowse link 17 70,500,672 70,547,929 RGD:11554173
G Il3 interleukin 3 JBrowse link 10 39,620,535 39,622,973 RGD:11554173
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:11554173
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:11554173
G Ilk integrin-linked kinase JBrowse link 1 170,578,941 170,585,192 RGD:11554173
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:11554173
G Limch1 LIM and calponin homology domains 1 JBrowse link 14 42,760,363 43,072,976 RGD:11554173
G Lta lymphotoxin alpha JBrowse link 20 4,851,889 4,854,677 RGD:11554173
G Mcam melanoma cell adhesion molecule JBrowse link 8 48,472,824 48,481,005 RGD:7364782
RGD:11554173
G Mdk midkine JBrowse link 3 80,841,003 80,843,895 RGD:11554173
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link 4 44,747,467 44,854,628 RGD:11554173
G Mif macrophage migration inhibitory factor JBrowse link 20 13,715,219 13,732,980 RGD:11554173
G Mir125a microRNA 125a JBrowse link 1 59,704,827 59,704,911 RGD:11554173
G Mir126b microRNA 126b JBrowse link 3 4,042,488 4,042,560 RGD:11554173
G Mir484 microRNA 484 JBrowse link 10 27,845 27,921 RGD:11554173
G Mlana melan-A JBrowse link 1 247,869,756 247,883,558 RGD:11554173
G Msln mesothelin JBrowse link 10 15,119,700 15,129,129 RGD:11554173
G Mtmr4 myotubularin related protein 4 JBrowse link 10 74,886,600 74,909,532 RGD:11554173
G Muc1 mucin 1, cell surface associated JBrowse link 2 188,543,137 188,547,874 RGD:11554173
G Nanos1 nanos C2HC-type zinc finger 1 JBrowse link 1 282,134,676 282,140,370 RGD:11554173
G Nat2 N-acetyltransferase 2 JBrowse link 16 23,960,709 23,991,570 RGD:5131858
RGD:11554173
G Nf2 neurofibromin 2 JBrowse link 14 84,996,905 85,088,547 RGD:11554173
G Ngf nerve growth factor JBrowse link 2 204,886,158 204,939,523 RGD:11554173
G Osmr oncostatin M receptor JBrowse link 2 56,107,491 56,163,522 RGD:11554173
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:11554173
G Pdpn podoplanin JBrowse link 5 161,947,137 161,981,441 RGD:11554173
G Pllp plasmolipin JBrowse link 19 10,731,855 10,752,641 RGD:11554173
G Ptprf protein tyrosine phosphatase, receptor type, F JBrowse link 5 137,036,936 137,112,930 RGD:11554173
G Pycard PYD and CARD domain containing JBrowse link 1 199,438,029 199,439,062 RGD:11554173
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase JBrowse link 4 147,532,040 147,592,769 RGD:11554173
G Rxra retinoid X receptor alpha JBrowse link 3 6,272,560 6,295,354 RGD:11554173
G Ryr2 ryanodine receptor 2 JBrowse link 17 65,533,998 65,955,606 RGD:11554173
G Sdc1 syndecan 1 JBrowse link 6 33,885,576 33,908,038 RGD:11554173
G Sema4f ssemaphorin 4F JBrowse link 4 113,738,225 113,764,532 RGD:11554173
G Serpina4 serpin family A member 4 JBrowse link 6 127,743,883 127,753,047 RGD:11554173
G Setd2 SET domain containing 2, histone lysine methyltransferase JBrowse link 8 118,802,478 118,888,224 RGD:11554173
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 JBrowse link 2 196,495,867 196,527,412 RGD:11554173
G Sf3b1 splicing factor 3b, subunit 1 JBrowse link 9 61,594,620 61,634,510 RGD:11554173
G Slc22a5 solute carrier family 22 member 5 JBrowse link 10 39,201,101 39,228,090 RGD:11554173
G Slc2a1 solute carrier family 2 member 1 JBrowse link 5 138,154,677 138,182,897 RGD:11554173
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 JBrowse link 1 244,615,811 244,783,736 RGD:11554173
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:11554173
G Tbl1xr1 transducin (beta)-like 1 X-linked receptor 1 JBrowse link 2 107,221,913 107,359,229 RGD:11554173
G Tf transferrin JBrowse link 8 111,694,570 111,721,275 RGD:11554173
G Tfdp2 transcription factor Dp-2 JBrowse link 8 104,040,795 104,181,228 RGD:11554173
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:11554173
G Tnfrsf8 TNF receptor superfamily member 8 JBrowse link 5 163,186,349 163,231,578 RGD:11554173
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:11554173
G Traf7 TNF receptor associated factor 7 JBrowse link 10 13,874,444 13,893,090 RGD:11554173
G Txn1 thioredoxin 1 JBrowse link 5 75,049,735 75,057,731 RGD:11554173
G Ulk2 unc-51 like autophagy activating kinase 2 JBrowse link 10 48,050,079 48,129,377 RGD:11554173
G Vim vimentin JBrowse link 17 80,882,715 80,891,200 RGD:11554173
G Wnt3 Wnt family member 3 JBrowse link 10 91,830,709 91,874,907 RGD:11554173
G Wt1 WT1 transcription factor JBrowse link 3 95,133,221 95,180,574 RGD:7240710
RGD:8554872
RGD:11554173
G Wwc1 WW and C2 domain containing 1 JBrowse link 10 20,662,996 20,818,500 RGD:11554173
Mesothelioma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apc APC regulator of WNT signaling pathway JBrowse link 18 27,011,710 27,106,323 RGD:11554173
G Bap1 Brca1 associated protein 1 JBrowse link 16 7,336,685 7,345,511 RGD:11554173
G Bcl10 BCL10, immune signaling adaptor JBrowse link 2 251,805,392 251,814,957 RGD:8554872
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:11554173
G Cdh1 cadherin 1 JBrowse link 19 38,768,467 38,838,395 RGD:11554173
G Cdkn1b cyclin-dependent kinase inhibitor 1B JBrowse link 4 168,689,043 168,694,159 RGD:11554173
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:11554173
G Cdkn2b cyclin-dependent kinase inhibitor 2B JBrowse link 5 107,834,353 107,857,428 RGD:7248760
G Dio2 iodothyronine deiodinase 2 JBrowse link 6 114,475,156 114,489,443 RGD:11554173
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:11554173
G Egr1 early growth response 1 JBrowse link 18 27,657,903 27,660,101 RGD:11554173
G Eid1 EP300 interacting inhibitor of differentiation 1 JBrowse link 3 117,938,500 117,940,219 RGD:11554173
G Ephx1 epoxide hydrolase 1 JBrowse link 13 99,271,390 99,300,580 RGD:4889125
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:4892302
RGD:11554173
G Fgf1 fibroblast growth factor 1 JBrowse link 18 32,273,830 32,359,831 RGD:11554173
G Fgf2 fibroblast growth factor 2 JBrowse link 2 124,081,072 124,134,133 RGD:11554173
G Fhit fragile histidine triad diadenosine triphosphatase JBrowse link 15 15,697,292 16,862,873 RGD:11554173
G Gdf10 growth differentiation factor 10 JBrowse link 16 10,250,508 10,262,383 RGD:11554173
G Gpc3 glypican 3 JBrowse link X 139,579,268 139,947,093 RGD:11554173
G Gsn gelsolin JBrowse link 3 14,456,106 14,508,922 RGD:11554173
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:11554173
G Ifng interferon gamma JBrowse link 7 61,337,383 61,341,419 RGD:11554173
G Itln1 intelectin 1 JBrowse link 13 89,919,570 89,929,774 RGD:11554173
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase JBrowse link 10 105,781,752 105,787,803 RGD:11554173
G Msln mesothelin JBrowse link 10 15,119,700 15,129,129 RGD:2326062
RGD:11554173
RGD:2326046
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:11554173
G Muc1 mucin 1, cell surface associated JBrowse link 2 188,543,137 188,547,874 RGD:11554173
G Myo18b myosin XVIIIb JBrowse link 12 49,761,100 49,979,745 RGD:11554173
G Nf2 neurofibromin 2 JBrowse link 14 84,996,905 85,088,547 RGD:11554173
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 JBrowse link 10 81,648,216 81,653,717 RGD:11554173
G Pdgfa platelet derived growth factor subunit A JBrowse link 12 17,734,141 17,756,186 RGD:11554173
G Pdgfc platelet derived growth factor C JBrowse link 2 179,952,227 180,126,897 RGD:11554173
G Pgr progesterone receptor JBrowse link 8 7,128,656 7,187,796 RGD:11554173
G Ppp1r14a protein phosphatase 1, regulatory (inhibitor) subunit 14A JBrowse link 1 87,224,683 87,232,842 RGD:11554173
G Puf60 poly-U binding splicing factor 60 JBrowse link 7 117,129,237 117,140,234 RGD:11554173
G Rassf1 Ras association domain family member 1 JBrowse link 8 116,307,149 116,318,289 RGD:11554173
G Slc6a20 solute carrier family 6 member 20 JBrowse link 8 132,713,013 132,753,145 RGD:11554173
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:11554173
G Spp1 secreted phosphoprotein 1 JBrowse link 14 6,673,686 6,679,965 RGD:11554173
G Syk spleen associated tyrosine kinase JBrowse link 17 12,614,311 12,669,568 RGD:11554173
G Tnc tenascin C JBrowse link 5 79,789,686 79,874,555 RGD:4889571
RGD:4889612
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:11554173
G Txnrd1 thioredoxin reductase 1 JBrowse link 7 26,946,124 26,984,400 RGD:11554173
G Wt1 WT1 transcription factor JBrowse link 3 95,133,221 95,180,574 RGD:8554872
G Xrcc1 X-ray repair cross complementing 1 JBrowse link 1 81,412,635 81,441,680 RGD:11554173
G Xrcc3 X-ray repair cross complementing 3 JBrowse link 6 136,366,917 136,380,751 RGD:11554173
Mucinous Cystadenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Daxx death-domain associated protein JBrowse link 20 5,480,103 5,485,962 RGD:9587820
oxyphilic adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kit KIT proto-oncogene receptor tyrosine kinase JBrowse link 14 35,072,131 35,149,638 RGD:2292414
G Krt7 keratin 7 JBrowse link 7 143,059,731 143,075,907 RGD:11554173
G Mt-nd6 mitochondrially encoded NADH dehydrogenase 6 JBrowse link MT 13,543 14,061 RGD:8554872
G Pvalb parvalbumin JBrowse link 7 119,428,657 119,443,674 RGD:11554173
pancreatic mucinous cystadenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kras KRAS proto-oncogene, GTPase JBrowse link 4 179,482,562 179,515,483 RGD:14398747
parathyroid adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Casr calcium-sensing receptor JBrowse link 11 67,188,204 67,262,261 RGD:8554872
G Cdc73 cell division cycle 73 JBrowse link 13 60,403,771 60,496,511 RGD:8554872
G Men1 menin 1 JBrowse link 1 221,704,394 221,710,343 RGD:8554872
Parathyroid Adenomatosis, Familial Cystic term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdc73 cell division cycle 73 JBrowse link 13 60,403,771 60,496,511 RGD:8554872
peritoneal mesothelioma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lats1 large tumor suppressor kinase 1 JBrowse link 1 1,784,078 1,817,310 RGD:8554872
G Lats2 large tumor suppressor kinase 2 JBrowse link 15 37,943,609 37,995,175 RGD:8554872
G Mecom MDS1 and EVI1 complex locus JBrowse link 2 117,396,084 117,993,604 RGD:8554872
pituitary adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdh23 cadherin-related 23 JBrowse link 20 29,857,018 30,263,758 RGD:8554872
G Grk2 G protein-coupled receptor kinase 2 JBrowse link 1 219,536,220 219,544,329 RGD:13792706
G LOC100361018 rCG22048-like JBrowse link 20 29,947,427 29,954,869 RGD:8554872
PITUITARY ADENOMA 3, MULTIPLE TYPES term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gnas GNAS complex locus JBrowse link 3 172,374,957 172,434,988 RGD:8554872
RGD:7240710
PITUITARY ADENOMA 5, MULTIPLE TYPES term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdh23 cadherin-related 23 JBrowse link 20 29,857,018 30,263,758 RGD:8554872
RGD:7240710
G LOC100361018 rCG22048-like JBrowse link 20 29,947,427 29,954,869 RGD:8554872
PITUITARY ADENOMA, GROWTH HORMONE-SECRETING, 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpr101 G protein-coupled receptor 101 JBrowse link X 140,296,220 140,303,743 RGD:7240710
RGD:8554872
pleomorphic adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plag1 PLAG1 zinc finger JBrowse link 5 16,788,186 16,842,827 RGD:1599086
RGD:13592920
Pleomorphic Salivary Gland Adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Plag1 PLAG1 zinc finger JBrowse link 5 16,788,186 16,842,827 RGD:7240710
prolactinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aip aryl-hydrocarbon receptor-interacting protein JBrowse link 1 219,361,859 219,373,924 RGD:8554872
G Bmp4 bone morphogenetic protein 4 JBrowse link 15 20,776,060 20,791,013 RGD:629544
RGD:11554173
G Cebpd CCAAT/enhancer binding protein delta JBrowse link 11 89,008,008 89,009,146 RGD:11554173
G Hpgd 15-hydroxyprostaglandin dehydrogenase JBrowse link 16 37,457,134 37,495,758 RGD:11667097
G Lrp2 LDL receptor related protein 2 JBrowse link 3 55,665,153 55,822,484 RGD:8554872
G Men1 menin 1 JBrowse link 1 221,704,394 221,710,343 RGD:13592920
G Myc MYC proto-oncogene, bHLH transcription factor JBrowse link 7 102,586,313 102,591,240 RGD:7240531
G Nog noggin JBrowse link 10 76,811,759 76,813,386 RGD:629544
G Npy5r neuropeptide Y receptor Y5 JBrowse link 16 24,796,685 24,805,730 RGD:1625506
G Prl prolactin JBrowse link 17 39,814,236 39,824,299 RGD:1642576
RGD:11554173
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:11667097
renal oncocytoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Flcn folliculin JBrowse link 10 46,153,185 46,172,331 RGD:11554173
sarcomatoid mesothelioma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdkn2a cyclin-dependent kinase inhibitor 2A JBrowse link 5 107,823,323 107,832,405 RGD:7248760
Serous Cystadenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Daxx death-domain associated protein JBrowse link 20 5,480,103 5,485,962 RGD:9587820
SESSILE SERRATED POLYPOSIS CANCER SYNDROME term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rnf43 ring finger protein 43 JBrowse link 10 74,956,411 75,028,951 RGD:8554872
RGD:7240710
Somatic Leydig Cell Adenoma, with Male-Limited Precocious Puberty term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lhcgr luteinizing hormone/choriogonadotropin receptor JBrowse link 6 12,493,182 12,554,482 RGD:8554872
thyroid adenoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Men1 menin 1 JBrowse link 1 221,704,394 221,710,343 RGD:8554872
G Minpp1 multiple inositol-polyphosphate phosphatase 1 JBrowse link 1 251,045,352 251,071,045 RGD:8554872
thyroid Hurthle cell carcinoma term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cbx7 chromobox 7 JBrowse link 7 121,136,067 121,153,503 RGD:11352710
G Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 JBrowse link 16 21,275,311 21,282,246 RGD:7240710
RGD:8554872
G Psmb9 proteasome subunit beta 9 JBrowse link 20 3,973,424 3,978,845 RGD:6483332

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14920
    disease of cellular proliferation 5588
      benign neoplasm 1179
        cell type benign neoplasm 635
          adenoma 267
            Adenomatous Polyps + 30
            Apudoma 0
            Bartholin's gland adenoma 0
            Familial Hepatic Adenomas 1
            Hyperparathyroidism 2 2
            Islet Cell Adenoma + 13
            Mesothelioma + 144
            Pancreatic Adenoma + 13
            Parathyroid Adenomatosis, Familial Cystic 1
            Pulmonary Adenomatosis 0
            Somatic Leydig Cell Adenoma, with Male-Limited Precocious Puberty 1
            Wolffian adnexal neoplasm 0
            Wolffian duct adenoma 0
            adenofibroma + 0
            adenomatoid tumor + 0
            adrenal rest tumor 0
            basophil adenoma 0
            bile duct adenoma + 0
            breast adenoma + 0
            cecal benign neoplasm + 0
            cecum adenoma 0
            clear cell adenoma 0
            colon adenoma 3
            colorectal adenoma 11
            cystadenoma + 2
            duodenum adenoma 0
            gallbladder adenoma 0
            hepatocellular adenoma 13
            hidradenoma + 0
            large intestine adenoma 0
            lipoadenoma 0
            lung adenoma + 0
            microcystic adenoma 0
            middle ear adenoma 0
            mixed cell adenoma 0
            oxyphilic adenoma + 8
            papillary adenoma + 0
            parathyroid adenoma + 3
            pituitary adenoma + 22
            pleomorphic adenoma + 1
            prostatic adenoma 0
            rectum adenoma + 0
            renal adenoma + 0
            rete ovarii adenoma + 0
            rete testis adenoma 0
            thyroid adenoma + 2
            villous adenoma + 0
            water-clear cell adenoma 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.