ONTOLOGY REPORT - ANNOTATIONS


Term:basal ganglia disease
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Accession:DOID:679 term browser browse the term
Definition:Diseases of the BASAL GANGLIA including the PUTAMEN; GLOBUS PALLIDUS; claustrum; AMYGDALA; and CAUDATE NUCLEUS. DYSKINESIAS (most notably involuntary movements and alterations of the rate of movement) represent the primary clinical manifestations of these disorders. Common etiologies include CEREBROVASCULAR DISORDERS; NEURODEGENERATIVE DISEASES; and CRANIOCEREBRAL TRAUMA.
Synonyms:exact_synonym: Basal Ganglia Disorder;   Basal Ganglia Disorders;   Extrapyramidal Disorder;   Extrapyramidal Disorders;   Lenticulostriate Disorder;   Lenticulostriate Disorders;   basal ganglia diseases
 primary_id: MESH:D001480;   RDO:0001075
For additional species annotation, visit the Alliance of Genome Resources.


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basal ganglia disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 JBrowse link 7 123,599,264 123,608,436 RGD:11554173
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:11554173
G Drd3 dopamine receptor D3 JBrowse link 11 61,819,102 61,883,223 RGD:11554173
G Ftl1 ferritin light chain 1 JBrowse link 1 101,448,190 101,450,034 RGD:5509839
G Htr2a 5-hydroxytryptamine receptor 2A JBrowse link 15 56,666,152 56,732,469 RGD:11554173
G Micu1 mitochondrial calcium uptake 1 JBrowse link 20 29,284,833 29,433,617 RGD:11554173
G Pde8b phosphodiesterase 8B JBrowse link 2 24,718,548 24,955,533 RGD:11554173
G Pdgfb platelet derived growth factor subunit B JBrowse link 7 121,215,458 121,233,092 RGD:11554173
G Pdgfrb platelet derived growth factor receptor beta JBrowse link 18 56,364,586 56,406,381 RGD:11554173
G Prl prolactin JBrowse link 17 39,814,236 39,824,299 RGD:11554173
G Slc19a3 solute carrier family 19 member 3 JBrowse link 9 88,762,775 88,828,553 RGD:11554173
G Slc20a2 solute carrier family 20 member 2 JBrowse link 16 74,318,287 74,408,030 RGD:11554173
G Xpr1 xenotropic and polytropic retrovirus receptor 1 JBrowse link 13 72,918,552 73,056,785 RGD:11554173
Aicardi-Goutieres syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adar adenosine deaminase, RNA-specific JBrowse link 2 189,045,551 189,085,448 RGD:11554173
RGD:8554872
RGD:11069491
G Ifih1 interferon induced with helicase C domain 1 JBrowse link 3 48,557,696 48,604,097 RGD:11554173
G Kat5 lysine acetyltransferase 5 JBrowse link 1 220,967,795 220,974,596 RGD:8554872
G Rnaseh2a ribonuclease H2, subunit A JBrowse link 19 26,074,980 26,084,780 RGD:8554872
RGD:13592920
G Rnaseh2b ribonuclease H2, subunit B JBrowse link 15 45,422,010 45,472,792 RGD:8554872
RGD:11554173
G Rnaseh2c ribonuclease H2, subunit C JBrowse link 1 220,966,626 220,967,717 RGD:8554872
RGD:13592920
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 JBrowse link 3 153,210,829 153,250,705 RGD:11554173
RGD:8554872
G Tldc2 TBC/LysM-associated domain containing 2 JBrowse link 3 153,195,295 153,208,118 RGD:8554872
G Trex1 three prime repair exonuclease 1 JBrowse link 8 117,796,127 117,797,427 RGD:8554872
RGD:11554173
G Usp18 ubiquitin specific peptidase 18 JBrowse link 4 153,812,312 153,834,374 RGD:11554173
Aicardi-Goutieres Syndrome 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trex1 three prime repair exonuclease 1 JBrowse link 8 117,796,127 117,797,427 RGD:8554872
RGD:7240710
Aicardi-Goutieres Syndrome 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rnaseh2b ribonuclease H2, subunit B JBrowse link 15 45,422,010 45,472,792 RGD:8554872
RGD:7240710
Aicardi-Goutieres Syndrome 3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rnaseh2c ribonuclease H2, subunit C JBrowse link 1 220,966,626 220,967,717 RGD:7240710
RGD:8554872
Aicardi-Goutieres Syndrome 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rnaseh2a ribonuclease H2, subunit A JBrowse link 19 26,074,980 26,084,780 RGD:7240710
RGD:8554872
Aicardi-Goutieres Syndrome 5 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 JBrowse link 3 153,210,829 153,250,705 RGD:7240710
RGD:8554872
RGD:11554173
G Tldc2 TBC/LysM-associated domain containing 2 JBrowse link 3 153,195,295 153,208,118 RGD:8554872
Aicardi-Goutieres Syndrome 6 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adar adenosine deaminase, RNA-specific JBrowse link 2 189,045,551 189,085,448 RGD:7240710
RGD:8554872
Aicardi-Goutieres Syndrome 7 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ifih1 interferon induced with helicase C domain 1 JBrowse link 3 48,557,696 48,604,097 RGD:7240710
RGD:8554872
amyotrophic lateral sclerosis type 14 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:7240710
RGD:8554872
amyotrophic lateral sclerosis type 15 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ubqln2 ubiquilin 2 JBrowse link X 18,723,313 18,726,732 RGD:7240710
RGD:8554872
amyotrophic lateral sclerosis type 22 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tuba4a tubulin, alpha 4A JBrowse link 9 82,415,599 82,419,918 RGD:7240710
RGD:8554872
amyotrophic lateral sclerosis type 6 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fus FUS RNA binding protein JBrowse link 1 199,412,805 199,426,705 RGD:7240710
RGD:8554872
RGD:9685712
Amyotrophic Lateral Sclerosis-Parkinsonism/Dementia Complex 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trpm7 transient receptor potential cation channel, subfamily M, member 7 JBrowse link 3 119,258,189 119,347,084 RGD:5685005
RGD:7240710
RGD:5685008
autosomal dominant Parkinson's disease 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:7240710
RGD:8554872
autosomal dominant Parkinson's disease 22 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 JBrowse link 9 101,388,148 101,388,819 RGD:7240710
RGD:8554872
autosomal dominant Parkinson's disease 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:7240710
autosomal dominant Parkinson's disease 8 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:5508405
RGD:8554872
RGD:7240710
autosomal recessive early-onset Parkinson's disease 15 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbxo7 F-box protein 7 JBrowse link 7 23,815,246 23,843,505 RGD:7240710
RGD:8554872
RGD:11554173
autosomal recessive early-onset Parkinson's disease 23 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vps13c vacuolar protein sorting 13 homolog C JBrowse link 8 73,682,814 73,843,290 RGD:8554872
RGD:7240710
autosomal recessive early-onset Parkinson's disease 6 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt-nd5 mitochondrially encoded NADH dehydrogenase 5 JBrowse link MT 11,736 13,565 RGD:8554872
G Mt-nd6 mitochondrially encoded NADH dehydrogenase 6 JBrowse link MT 13,543 14,061 RGD:8554872
G Mtfp1 mitochondrial fission process 1 JBrowse link 14 84,330,223 84,334,063 RGD:12880394
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:8554872
G Pink1 PTEN induced putative kinase 1 JBrowse link 5 156,677,146 156,689,258 RGD:7240710
RGD:8554872
RGD:11554173
autosomal recessive early-onset Parkinson's disease 7 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:7240710
RGD:8554872
RGD:11554173
autosomal recessive juvenile Parkinson's disease 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pacrg parkin coregulated JBrowse link 1 50,070,273 50,491,323 RGD:8554872
G Podxl podocalyxin-like JBrowse link 4 58,829,049 58,893,353 RGD:8554872
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:7240710
RGD:8554872
autosomal recessive Parkinson's disease 14 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pla2g6 phospholipase A2 group VI JBrowse link 7 120,519,479 120,559,716 RGD:7240710
RGD:8554872
basal ganglia calcification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdgfb platelet derived growth factor subunit B JBrowse link 7 121,215,458 121,233,092 RGD:13592920
G Pdgfrb platelet derived growth factor receptor beta JBrowse link 18 56,364,586 56,406,381 RGD:13592920
G Slc20a2 solute carrier family 20 member 2 JBrowse link 16 74,318,287 74,408,030 RGD:13592920
Bilateral Striatal Necrosis with Dystonia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt-nd6 mitochondrially encoded NADH dehydrogenase 6 JBrowse link MT 13,543 14,061 RGD:8554872
biotin-responsive basal ganglia disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc19a3 solute carrier family 19 member 3 JBrowse link 9 88,762,775 88,828,553 RGD:7240710
RGD:8554872
RGD:11554173
Chromosome 3-Linked Frontotemporal Dementia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chmp2b charged multivesicular body protein 2B JBrowse link 11 2,666,405 2,692,213 RGD:8554872
RGD:7240710
Copper-Overload Cirrhosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acta2 actin alpha 2, smooth muscle JBrowse link 1 252,537,614 252,550,394 RGD:11554173
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:11554173
G Commd1 copper metabolism domain containing 1 JBrowse link 14 107,664,321 107,759,974 RGD:11554173
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:11554173
G Krt19 keratin 19 JBrowse link 10 88,055,843 88,060,560 RGD:11554173
G Krt7 keratin 7 JBrowse link 7 143,059,731 143,075,907 RGD:11554173
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link 4 44,747,467 44,854,628 RGD:11554173
G Mki67 marker of proliferation Ki-67 JBrowse link 1 207,993,895 208,020,454 RGD:11554173
G Smad2 SMAD family member 2 JBrowse link 18 72,550,107 72,612,078 RGD:11554173
G Stat3 signal transducer and activator of transcription 3 JBrowse link 10 88,790,401 88,842,263 RGD:11554173
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:11554173
Dystonia Musculorum Deformans term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tor1a torsin family 1, member A JBrowse link 3 9,800,322 9,807,318 RGD:634735
DYSTONIA, CHILDHOOD-ONSET, WITH OPTIC ATROPHY AND BASAL GANGLIA ABNORMALITIES term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mecr mitochondrial trans-2-enoyl-CoA reductase JBrowse link 5 150,001,281 150,027,407 RGD:8554872
RGD:7240710
Early Onset Parkinsonism with Mental Retardation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clic2 chloride intracellular channel 2 JBrowse link 20 295,338 310,363 RGD:8554872
early-onset Parkinson's disease 20 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cfap298 cilia and flagella associated protein 298 JBrowse link 11 31,094,103 31,103,487 RGD:8554872
G Synj1 synaptojanin 1 JBrowse link 11 31,105,784 31,181,573 RGD:7240710
RGD:8554872
frontotemporal dementia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 JBrowse link 7 41,114,606 41,223,138 RGD:13592920
G Bace2 beta-secretase 2 JBrowse link 11 37,798,397 37,880,624 RGD:13782172
G Chmp2b charged multivesicular body protein 2B JBrowse link 11 2,666,405 2,692,213 RGD:5688398
RGD:8554872
RGD:11554173
RGD:5688721
RGD:5688716
G Grn granulin precursor JBrowse link 10 90,377,103 90,383,207 RGD:5509588
RGD:8554872
RGD:11554173
RGD:5509612
RGD:5509609
RGD:5509602
RGD:5509589
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:5508418
RGD:8554872
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:1302531
RGD:8554872
RGD:11554173
RGD:10412702
RGD:10412699
RGD:8158108
RGD:7240710
G March4 membrane associated ring-CH-type finger 4 JBrowse link 9 79,781,752 79,898,726 RGD:8554872
G Masp2 mannan-binding lectin serine peptidase 2 JBrowse link 5 165,415,105 165,429,857 RGD:8554872
G Mef2c myocyte enhancer factor 2C JBrowse link 2 11,658,534 11,822,788 RGD:8554872
G Pou1f1 POU class 1 homeobox 1 JBrowse link 11 2,645,659 2,662,581 RGD:8554872
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:10412726
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:7240710
RGD:8554872
RGD:11554173
G Tardbp TAR DNA binding protein JBrowse link 5 165,432,089 165,442,232 RGD:8554872
RGD:13592920
G Trem2 triggering receptor expressed on myeloid cells 2 JBrowse link 9 14,611,541 14,618,076 RGD:13592920
FTDALS1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G RGD1359108 similar to RIKEN cDNA 3110043O21 JBrowse link 5 50,666,444 50,691,523 RGD:7240710
RGD:8554872
RGD:11554173
G Sqstm1 sequestosome 1 JBrowse link 10 35,704,728 35,716,316 RGD:8554872
FTDALS2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chchd10 coiled-coil-helix-coiled-coil-helix domain containing 10 JBrowse link 20 13,665,046 13,666,845 RGD:7240710
RGD:8554872
FTDALS3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sqstm1 sequestosome 1 JBrowse link 10 35,704,728 35,716,316 RGD:7240710
RGD:8554872
FTDALS4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tbk1 TANK-binding kinase 1 JBrowse link 7 63,655,247 63,687,978 RGD:8554872
RGD:7240710
Gilles de la Tourette syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Baiap2 BAI1-associated protein 2 JBrowse link 10 109,107,326 109,187,458 RGD:11576298
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:2311576
RGD:6907444
G Drd3 dopamine receptor D3 JBrowse link 11 61,819,102 61,883,223 RGD:11554173
G Drd4 dopamine receptor D4 JBrowse link 1 214,278,296 214,282,818 RGD:13209010
RGD:13210516
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 JBrowse link 8 63,599,907 63,637,327 RGD:9693691
G Hdc histidine decarboxylase JBrowse link 3 119,057,524 119,075,599 RGD:7240710
RGD:8554872
G Met MET proto-oncogene, receptor tyrosine kinase JBrowse link 4 44,747,467 44,854,628 RGD:13592920
G Slc6a3 solute carrier family 6 member 3 JBrowse link 1 32,323,011 32,363,983 RGD:13592920
G Slitrk1 SLIT and NTRK-like family, member 1 JBrowse link 15 93,303,382 93,307,420 RGD:7240710
RGD:8554872
G Tdo2 tryptophan 2,3-dioxygenase JBrowse link 2 180,897,059 180,914,919 RGD:1358595
GRN-related frontotemporal lobar degeneration with TDP43 inclusions term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Grn granulin precursor JBrowse link 10 90,377,103 90,383,207 RGD:5509604
RGD:8554872
RGD:7240710
G Tardbp TAR DNA binding protein JBrowse link 5 165,432,089 165,442,232 RGD:13592920
Huntington's disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abat 4-aminobutyrate aminotransferase JBrowse link 10 7,093,406 7,200,439 RGD:10047058
RGD:10046047
G Ache acetylcholinesterase JBrowse link 12 22,472,358 22,477,052 RGD:5688127
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link 11 81,330,845 81,344,488 RGD:5686822
G Agtr1a angiotensin II receptor, type 1a JBrowse link 17 35,907,102 35,958,136 RGD:10047397
G Aifm1 apoptosis inducing factor, mitochondria associated 1 JBrowse link X 135,304,063 135,343,062 RGD:11554173
G Apoa4 apolipoprotein A4 JBrowse link 8 50,536,983 50,539,371 RGD:5147768
G Atf2 activating transcription factor 2 JBrowse link 3 60,721,137 60,795,951 RGD:10047400
G Atrx ATRX, chromatin remodeler JBrowse link X 76,820,110 76,979,155 RGD:11040584
G Bag1 Bcl2 associated athanogene 1 JBrowse link 5 57,254,421 57,267,002 RGD:13506921
G Bax BCL2 associated X, apoptosis regulator JBrowse link 1 101,451,801 101,457,207 RGD:10054041
RGD:10054048
G Bche butyrylcholinesterase JBrowse link 2 171,104,476 171,196,186 RGD:5688127
G Bcl2 BCL2, apoptosis regulator JBrowse link 13 26,605,426 26,769,374 RGD:10054041
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:10058981
RGD:10415531
RGD:10059353
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:13432082
RGD:10413886
G Casp8 caspase 8 JBrowse link 9 65,614,142 65,662,624 RGD:734695
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:13432083
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:5130752
G Cebpa CCAAT/enhancer binding protein alpha JBrowse link 1 91,363,492 91,366,164 RGD:6484269
RGD:10401191
G Cebpb CCAAT/enhancer binding protein beta JBrowse link 3 164,424,502 164,425,933 RGD:10401227
G Chat choline O-acetyltransferase JBrowse link 16 8,576,858 8,686,131 RGD:5686805
G Cib1 calcium and integrin binding 1 JBrowse link 1 142,014,962 142,020,461 RGD:10401859
G Cnr1 cannabinoid receptor 1 JBrowse link 5 49,307,584 49,333,064 RGD:11554173
G Cnr2 cannabinoid receptor 2 JBrowse link 5 154,242,010 154,268,126 RGD:2316196
G Cntf ciliary neurotrophic factor JBrowse link 1 229,599,009 229,601,032 RGD:628474
RGD:734795
G Creb1 cAMP responsive element binding protein 1 JBrowse link 9 71,229,753 71,298,994 RGD:734817
RGD:10059577
G Crebbp CREB binding protein JBrowse link 10 11,590,994 11,721,039 RGD:10059583
RGD:13432094
RGD:13432093
G Ctsh cathepsin H JBrowse link 8 97,439,155 97,458,293 RGD:5686393
G Cycs cytochrome c, somatic JBrowse link 4 80,331,226 80,333,326 RGD:13432083
G Diablo diablo, IAP-binding mitochondrial protein JBrowse link 12 38,490,230 38,503,344 RGD:11554173
G Dlg4 discs large MAGUK scaffold protein 4 JBrowse link 10 56,625,845 56,655,543 RGD:13432154
RGD:13432155
G Dnah6 dynein, axonemal, heavy chain 6 JBrowse link 4 100,936,834 101,157,511 RGD:13432158
G Drd1 dopamine receptor D1 JBrowse link 17 11,099,736 11,104,352 RGD:2302117
RGD:13592920
RGD:7248682
RGD:5686414
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:5686414
RGD:7248682
G Drd3 dopamine receptor D3 JBrowse link 11 61,819,102 61,883,223 RGD:5686414
G Drd5 dopamine receptor D5 JBrowse link 14 77,220,579 77,222,006 RGD:5686414
G Dusp1 dual specificity phosphatase 1 JBrowse link 10 16,970,642 16,973,425 RGD:7771544
G Dynlt1 dynein light chain Tctex-type 1 JBrowse link 1 47,206,892 47,213,785 RGD:13432158
G E2f1 E2F transcription factor 1 JBrowse link 3 150,062,895 150,073,721 RGD:2316262
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:10047165
G Egr1 early growth response 1 JBrowse link 18 27,657,903 27,660,101 RGD:10395281
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 JBrowse link 6 1,428,845 1,466,193 RGD:10395345
RGD:10395348
G Elk1 ETS transcription factor ELK1 JBrowse link X 1,287,875 1,304,822 RGD:7488914
G Ep300 E1A binding protein p300 JBrowse link 7 122,818,194 122,889,055 RGD:13432192
G F2 coagulation factor II JBrowse link 3 80,529,468 80,542,993 RGD:5147768
G Faah fatty acid amide hydrolase JBrowse link 5 134,852,899 134,872,095 RGD:11554173
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:12903948
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:12903948
G Foxp1 forkhead box P1 JBrowse link 4 131,362,178 131,963,466 RGD:11560524
G Gapdh glyceraldehyde-3-phosphate dehydrogenase JBrowse link 4 157,676,336 157,680,322 RGD:13792684
G Gdnf glial cell derived neurotrophic factor JBrowse link 2 56,884,181 56,912,964 RGD:11554173
G Git1 GIT ArfGAP 1 JBrowse link 10 62,656,000 62,664,467 RGD:1549448
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:7207854
G Glul glutamate-ammonia ligase JBrowse link 13 71,331,052 71,340,207 RGD:10046047
RGD:13524508
G Gpx1 glutathione peroxidase 1 JBrowse link 8 117,117,430 117,118,528 RGD:13432193
G Gpx6 glutathione peroxidase 6 JBrowse link 17 45,439,268 45,446,952 RGD:13432193
G Grik2 glutamate ionotropic receptor kainate type subunit 2 JBrowse link 20 53,791,428 54,517,691 RGD:1358638
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A JBrowse link 10 5,707,806 6,123,568 RGD:13432195
RGD:13432556
RGD:13432554
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B JBrowse link 4 169,541,620 170,000,216 RGD:13432195
RGD:13432556
RGD:13432554
G Grm5 glutamate metabotropic receptor 5 JBrowse link 1 151,207,846 151,785,038 RGD:13432558
RGD:13432562
RGD:13432561
RGD:13432158
G Gsr glutathione-disulfide reductase JBrowse link 16 62,197,617 62,239,987 RGD:10401927
G Haao 3-hydroxyanthranilate 3,4-dioxygenase JBrowse link 6 7,045,145 7,059,227 RGD:13524507
G Hap1 huntingtin-associated protein 1 JBrowse link 10 88,257,975 88,266,210 RGD:13432575
RGD:10401859
RGD:13432579
RGD:13432578
RGD:13432577
RGD:13432576
G Hdac1 histone deacetylase 1 JBrowse link 5 147,716,664 147,743,723 RGD:9590098
RGD:10402189
G Hdac3 histone deacetylase 3 JBrowse link 18 31,073,057 31,094,347 RGD:9590098
RGD:10402189
G Hdac7 histone deacetylase 7 JBrowse link 7 139,280,396 139,319,108 RGD:9681718
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase JBrowse link 2 27,480,224 27,500,654 RGD:5508462
G Hnmt histamine N-methyltransferase JBrowse link 3 905,111 937,038 RGD:5509774
G Hpca hippocalcin JBrowse link 5 147,295,124 147,305,757 RGD:9693681
G Hsf1 heat shock transcription factor 1 JBrowse link 7 117,538,523 117,565,478 RGD:10402372
RGD:10402387
RGD:10402386
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:5688778
G Htra2 HtrA serine peptidase 2 JBrowse link 4 113,883,671 113,886,833 RGD:5688723
G Htt huntingtin JBrowse link 14 81,105,139 81,254,637 RGD:1302537
RGD:8554872
RGD:13452381
RGD:11554173
RGD:11062153
RGD:11062152
RGD:10403029
RGD:10403026
RGD:10402938
RGD:7240710
RGD:6902915
G Ift57 intraflagellar transport 57 JBrowse link 11 53,664,638 53,731,779 RGD:13432581
G Ift88 intraflagellar transport 88 JBrowse link 15 37,690,417 37,786,855 RGD:13432581
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:10045865
RGD:12904970
RGD:10045870
G Igf1r insulin-like growth factor 1 receptor JBrowse link 1 128,924,921 129,213,816 RGD:10045870
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:10402809
G Il6r interleukin 6 receptor JBrowse link 2 189,196,180 189,255,987 RGD:10402809
G Ip6k2 inositol hexakisphosphate kinase 2 JBrowse link 8 117,574,136 117,599,849 RGD:11554173
G Itpr1 inositol 1,4,5-trisphosphate receptor, type 1 JBrowse link 4 140,247,297 140,580,749 RGD:6480685
RGD:6483009
RGD:6480875
G Kdm5c lysine demethylase 5C JBrowse link X 22,302,664 22,349,298 RGD:9587806
G L1cam L1 cell adhesion molecule JBrowse link X 156,901,244 156,928,064 RGD:6483035
G Lep leptin JBrowse link 4 56,337,695 56,351,818 RGD:5128676
G Maoa monoamine oxidase A JBrowse link X 6,554,698 6,620,722 RGD:11554173
G Maob monoamine oxidase B JBrowse link X 6,430,694 6,533,520 RGD:11554173
G Map2 microtubule-associated protein 2 JBrowse link 9 73,204,753 73,462,965 RGD:6483090
G Map3k5 mitogen-activated protein kinase kinase kinase 5 JBrowse link 1 15,412,603 15,613,752 RGD:10412311
RGD:10412314
G Mbp myelin basic protein JBrowse link 18 79,326,738 79,437,310 RGD:7349325
G Mir132 microRNA 132 JBrowse link 10 62,014,995 62,015,095 RGD:11041745
G Mir22 microRNA 22 JBrowse link 10 62,299,592 62,299,686 RGD:11041745
G Mir222 microRNA 222 JBrowse link X 3,683,919 3,684,021 RGD:11041745
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:13204827
G Msh2 mutS homolog 2 JBrowse link 6 11,215,951 11,274,916 RGD:10412317
G Mt-co2 mitochondrially encoded cytochrome c oxidase II JBrowse link MT 7,006 7,689 RGD:13506651
G Mt-nd3 mitochondrially encoded NADH dehydrogenase 3 JBrowse link MT 9,451 9,798 RGD:5687693
G Mtnr1a melatonin receptor 1A JBrowse link 16 50,339,358 50,358,809 RGD:9686058
G Napepld N-acyl phosphatidylethanolamine phospholipase D JBrowse link 4 9,965,323 10,004,650 RGD:10412654
G Ncor1 nuclear receptor co-repressor 1 JBrowse link 10 48,629,121 48,772,890 RGD:5688338
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:10412688
G Nfkb1 nuclear factor kappa B subunit 1 JBrowse link 2 240,773,520 240,890,053 RGD:10045663
G Ngfr nerve growth factor receptor JBrowse link 10 83,389,828 83,408,061 RGD:10058981
G Nog noggin JBrowse link 10 76,811,759 76,813,386 RGD:10415531
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:2292130
G Npy neuropeptide Y JBrowse link 4 79,557,856 79,565,059 RGD:10431606
RGD:10433553
RGD:10433112
G Npy2r neuropeptide Y receptor Y2 JBrowse link 2 181,528,949 181,538,145 RGD:10431606
G Nrf1 nuclear respiratory factor 1 JBrowse link 4 57,335,732 57,445,317 RGD:6771173
RGD:6770890
G Ogg1 8-oxoguanine DNA glycosylase JBrowse link 4 145,282,828 145,289,367 RGD:11554173
G Optn optineurin JBrowse link 17 77,167,700 77,218,374 RGD:6480499
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:10413886
G Pcp4 Purkinje cell protein 4 JBrowse link 11 36,851,035 36,912,272 RGD:9850159
G Plcb3 phospholipase C beta 3 JBrowse link 1 222,207,887 222,224,993 RGD:13432582
G Polr2a RNA polymerase II subunit A JBrowse link 10 56,339,277 56,364,888 RGD:10043799
G Ppard peroxisome proliferator-activated receptor delta JBrowse link 20 7,818,289 7,883,482 RGD:13592920
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:6484259
RGD:10395291
RGD:10395290
RGD:10395289
RGD:10053656
RGD:10053663
RGD:6770890
RGD:10053650
RGD:7242018
RGD:10053648
RGD:6484269
G Ppp1r1b protein phosphatase 1, regulatory (inhibitor) subunit 1B JBrowse link 10 86,303,727 86,312,770 RGD:13515080
G Ppp1r9a protein phosphatase 1, regulatory subunit 9A JBrowse link 4 29,976,485 30,247,371 RGD:10043799
G Ppp3ca protein phosphatase 3 catalytic subunit alpha JBrowse link 2 241,909,332 242,186,861 RGD:6483320
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 JBrowse link 2 54,857,688 54,893,404 RGD:6484534
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:10412729
G Psmb9 proteasome subunit beta 9 JBrowse link 20 3,973,424 3,978,845 RGD:6483364
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:5508227
G Qprt quinolinate phosphoribosyltransferase JBrowse link 1 198,544,262 198,559,556 RGD:13524507
G Rcan1 regulator of calcineurin 1 JBrowse link 11 32,539,689 32,620,274 RGD:11554173
G Setdb1 SET domain bifurcated histone lysine methyltransferase 1 JBrowse link 2 196,495,867 196,527,412 RGD:9590159
G Sin3a SIN3 transcription regulator family member A JBrowse link 8 61,748,590 61,803,314 RGD:5688338
G Sirt1 sirtuin 1 JBrowse link 20 26,831,971 26,851,587 RGD:9585998
RGD:10395240
RGD:9586004
G Slc18a3 solute carrier family 18 member A3 JBrowse link 16 8,682,668 8,685,529 RGD:5686805
G Slc1a2 solute carrier family 1 member 2 JBrowse link 3 92,518,679 92,665,731 RGD:13432194
RGD:13432195
G Slc29a1 solute carrier family 29 member 1 JBrowse link 9 17,784,468 17,799,008 RGD:11554173
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:13464352
G Srsf6 serine and arginine rich splicing factor 6 JBrowse link 3 159,305,345 159,310,668 RGD:11039484
G Tbp TATA box binding protein JBrowse link 1 57,491,381 57,509,335 RGD:5684339
G Tfam transcription factor A, mitochondrial JBrowse link 20 18,594,057 18,606,106 RGD:6770890
RGD:6771173
G Timp2 TIMP metallopeptidase inhibitor 2 JBrowse link 10 107,338,465 107,386,072 RGD:1580169
G Trip10 thyroid hormone receptor interactor 10 JBrowse link 9 9,689,214 9,702,353 RGD:11535137
G Tug1 taurine up-regulated 1 JBrowse link 14 83,878,757 83,885,791 RGD:11073597
G Ucp1 uncoupling protein 1 JBrowse link 19 24,456,976 24,464,808 RGD:10045649
RGD:10045650
G Ucp2 uncoupling protein 2 JBrowse link 1 165,506,375 165,512,744 RGD:10045655
G Xpo5 exportin 5 JBrowse link 9 17,125,201 17,163,170 RGD:11041745
G Zdhhc13 zinc finger, DHHC-type containing 13 JBrowse link 1 104,106,211 104,145,045 RGD:13592920
G Zdhhc17 zinc finger, DHHC-type containing 17 JBrowse link 7 53,651,529 53,715,007 RGD:13592920
Huntington's disease-like 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prnp prion protein JBrowse link 3 124,515,917 124,531,320 RGD:7240710
RGD:8554872
Hypoprebetalipoproteinemia, Acanthocytosis, Retinitis Pigmentosa, and Pallidal Degeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pank2 pantothenate kinase 2 JBrowse link 3 123,807,911 123,841,797 RGD:7240710
RGD:8554872
Idiopathic Basal Ganglia Calcification 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chrna6 cholinergic receptor nicotinic alpha 6 subunit JBrowse link 16 68,860,018 68,866,718 RGD:8554872
G Chrnb3 cholinergic receptor nicotinic beta 3 subunit JBrowse link 16 68,876,442 68,913,628 RGD:8554872
G Fnta farnesyltransferase, CAAX box, alpha JBrowse link 16 70,834,957 70,854,724 RGD:8554872
G Hook3 hook microtubule-tethering protein 3 JBrowse link 16 70,710,347 70,818,789 RGD:8554872
G Pdgfb platelet derived growth factor subunit B JBrowse link 7 121,215,458 121,233,092 RGD:11554173
G Pdgfrb platelet derived growth factor receptor beta JBrowse link 18 56,364,586 56,406,381 RGD:11554173
G Rnf170 ring finger protein 170 JBrowse link 16 70,684,886 70,710,147 RGD:8554872
G Slc20a2 solute carrier family 20 member 2 JBrowse link 16 74,318,287 74,408,030 RGD:7240710
RGD:8554872
RGD:11554173
G Smim19 small integral membrane protein 19 JBrowse link 16 74,408,085 74,422,070 RGD:8554872
G Thap1 THAP domain containing 1 JBrowse link 16 70,661,360 70,665,831 RGD:8554872
Idiopathic Basal Ganglia Calcification 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdgfrb platelet derived growth factor receptor beta JBrowse link 18 56,364,586 56,406,381 RGD:7240710
RGD:8554872
Idiopathic Basal Ganglia Calcification 5 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdgfb platelet derived growth factor subunit B JBrowse link 7 121,215,458 121,233,092 RGD:7240710
RGD:8554872
Idiopathic Basal Ganglia Calcification 6 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Xpr1 xenotropic and polytropic retrovirus receptor 1 JBrowse link 13 72,918,552 73,056,785 RGD:8554872
RGD:7240710
Idiopathic Basal Ganglia Calcification 7 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Myorg myogenesis regulating glycosidase JBrowse link 5 57,873,404 57,882,008 RGD:8554872
RGD:7240710
Immunodeficiency 38, with Basal Ganglia Calcification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Isg15 ISG15 ubiquitin-like modifier JBrowse link 5 173,624,862 173,629,124 RGD:8554872
RGD:7240710
Inclusion Body Myopathy with Early-Onset Paget Disease with or without Frontotemporal Dementia 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:7240710
RGD:8554872
Inclusion Body Myopathy with Early-Onset Paget Disease with or without Frontotemporal Dementia 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 4 81,237,496 81,241,281 RGD:8554872
RGD:7240710
Inclusion Body Myopathy with Early-Onset Paget Disease with or without Frontotemporal Dementia 3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 7 144,865,302 144,871,592 RGD:7240710
RGD:8554872
inclusion body myopathy with Paget disease of bone and frontotemporal dementia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Egf epidermal growth factor JBrowse link 2 68,820,616 68,895,537 RGD:10059681
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 JBrowse link 7 144,865,302 144,871,592 RGD:11554173
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 JBrowse link 4 81,237,496 81,241,281 RGD:10395280
RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:10059681
G Vcp valosin-containing protein JBrowse link 5 58,426,548 58,445,953 RGD:11554173
juvenile onset Parkinson's disease 19A term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 JBrowse link 5 120,330,372 120,492,515 RGD:7240710
RGD:8554872
Kufor-Rakeb syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp13a2 ATPase cation transporting 13A2 JBrowse link 5 159,512,208 159,531,631 RGD:7240710
RGD:8554872
RGD:11554173
late onset Parkinson's disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adh1 alcohol dehydrogenase 1 (class I) JBrowse link 2 243,550,655 243,562,243 RGD:7240710
G Atxn2 ataxin 2 JBrowse link 12 40,264,601 40,335,637 RGD:7240710
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:8554872
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 JBrowse link 8 112,697,907 112,830,445 RGD:8554872
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 JBrowse link 11 83,907,659 83,927,683 RGD:8554872
RGD:7240710
G Fgf20 fibroblast growth factor 20 JBrowse link 16 55,152,748 55,159,352 RGD:8554872
G Gba glucosylceramidase beta JBrowse link 2 188,511,781 188,522,602 RGD:7240710
RGD:8554872
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:5148021
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:8554872
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:7240710
RGD:8554872
G Mc1r melanocortin 1 receptor JBrowse link 19 56,215,420 56,219,987 RGD:8554872
G Mt-nd1 mitochondrially encoded NADH dehydrogenase 1 JBrowse link MT 2,740 3,694 RGD:8554872
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 JBrowse link 3 43,111,258 43,128,391 RGD:8554872
RGD:11554173
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:8554872
G Pink1 PTEN induced putative kinase 1 JBrowse link 5 156,677,146 156,689,258 RGD:8554872
G Podxl podocalyxin-like JBrowse link 4 58,829,049 58,893,353 RGD:8554872
G RT1-Da RT1 class II, locus Da JBrowse link 20 4,127,644 4,132,616 RGD:5490156
G Sncaip synuclein, alpha interacting protein JBrowse link 18 47,739,284 47,877,679 RGD:8554872
RGD:11554173
G Tbp TATA box binding protein JBrowse link 1 57,491,381 57,509,335 RGD:7240710
G Uchl1 ubiquitin C-terminal hydrolase L1 JBrowse link 14 43,133,224 43,143,942 RGD:7240710
G Vps35 VPS35 retromer complex component JBrowse link 19 27,464,937 27,500,636 RGD:8554872
Lewy body dementia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ager advanced glycosylation end product-specific receptor JBrowse link 20 4,363,152 4,366,079 RGD:11554173
G Aif1 allograft inflammatory factor 1 JBrowse link 20 5,161,350 5,167,176 RGD:11554173
G Anxa5 annexin A5 JBrowse link 2 123,162,477 123,194,730 RGD:10053729
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:7771591
G Becn1 beclin 1 JBrowse link 10 89,209,944 89,225,297 RGD:11554173
G Ccr1 C-C motif chemokine receptor 1 JBrowse link 8 132,996,646 133,002,201 RGD:5688166
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit JBrowse link 3 176,533,182 176,547,965 RGD:1358509
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit JBrowse link 1 123,897,341 124,039,263 RGD:1358509
G Edn1 endothelin 1 JBrowse link 17 22,136,814 22,143,745 RGD:11554173
G Elk1 ETS transcription factor ELK1 JBrowse link X 1,287,875 1,304,822 RGD:7488914
G Gba glucosylceramidase beta JBrowse link 2 188,511,781 188,522,602 RGD:5508424
RGD:8554872
RGD:12791014
RGD:11554173
RGD:7240710
G Gfap glial fibrillary acidic protein JBrowse link 10 90,990,762 90,999,435 RGD:11554173
G Gpr37 G protein-coupled receptor 37 JBrowse link 4 51,822,163 51,844,228 RGD:13504666
G Igf1r insulin-like growth factor 1 receptor JBrowse link 1 128,924,921 129,213,816 RGD:5129515
RGD:11554173
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:5129515
RGD:11554173
G Igf2r insulin-like growth factor 2 receptor JBrowse link 1 48,176,095 48,264,482 RGD:11554173
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:11554173
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:11554173
G Klk6 kallikrein related-peptidase 6 JBrowse link 1 99,762,195 99,769,486 RGD:1358597
G Mag myelin-associated glycoprotein JBrowse link 1 89,345,325 89,360,905 RGD:11554173
G Map2 microtubule-associated protein 2 JBrowse link 9 73,204,753 73,462,965 RGD:6483091
G Ngf nerve growth factor JBrowse link 2 204,886,158 204,939,523 RGD:11554173
G Ngfr nerve growth factor receptor JBrowse link 10 83,389,828 83,408,061 RGD:10413896
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:1358529
G Ntrk1 neurotrophic receptor tyrosine kinase 1 JBrowse link 2 187,143,568 187,160,373 RGD:11554173
G Ntrk2 neurotrophic receptor tyrosine kinase 2 JBrowse link 17 5,934,651 6,245,778 RGD:11554173
G Pcna proliferating cell nuclear antigen JBrowse link 3 124,880,698 124,884,570 RGD:10448971
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:10412737
G Sept4 septin 4 JBrowse link 10 74,860,068 74,884,196 RGD:13504670
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:6478704
RGD:8554872
RGD:13506723
RGD:11554173
RGD:7240710
RGD:6480103
RGD:6480095
RGD:6478792
G Sncb synuclein, beta JBrowse link 17 10,384,472 10,392,776 RGD:6219004
RGD:8554872
RGD:7240710
RGD:6480095
RGD:6478800
G Sncg synuclein, gamma JBrowse link 16 10,722,110 10,726,648 RGD:6478704
RGD:6480095
RGD:6478792
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:11554173
G Tardbp TAR DNA binding protein JBrowse link 5 165,432,089 165,442,232 RGD:5687180
MPTP Poisoning term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:11554173
multiple system atrophy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ambra1 autophagy and beclin 1 regulator 1 JBrowse link 3 80,634,470 80,830,068 RGD:14390070
G Coq2 coenzyme Q2, polyprenyltransferase JBrowse link 14 10,581,102 10,601,093 RGD:11554173
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:8663486
G Gdnf glial cell derived neurotrophic factor JBrowse link 2 56,884,181 56,912,964 RGD:5688775
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:5509960
G Klk6 kallikrein related-peptidase 6 JBrowse link 1 99,762,195 99,769,486 RGD:1358597
G Mir96 microRNA 96 JBrowse link 4 57,463,366 57,463,471 RGD:11553929
G Mt3 metallothionein 3 JBrowse link 19 11,324,708 11,326,112 RGD:6480516
G Slc1a1 solute carrier family 1 member 1 JBrowse link 1 246,955,017 247,035,159 RGD:11553929
G Slc6a6 solute carrier family 6 member 6 JBrowse link 4 123,638,619 123,713,469 RGD:11553929
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:6480091
olivopontocerebellar atrophy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aptx aprataxin JBrowse link 5 56,987,714 57,009,481 RGD:10054301
G Tsen54 tRNA splicing endonuclease subunit 54 JBrowse link 10 104,358,401 104,366,926 RGD:8554872
pantothenate kinase-associated neurodegeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pank2 pantothenate kinase 2 JBrowse link 3 123,807,911 123,841,797 RGD:7240710
RGD:8554872
RGD:11554173
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:6480098
G Sncb synuclein, beta JBrowse link 17 10,384,472 10,392,776 RGD:6480098
G Sncg synuclein, gamma JBrowse link 16 10,722,110 10,726,648 RGD:6480098
Parkinson's disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G A2m alpha-2-macroglobulin JBrowse link 4 154,309,426 154,359,138 RGD:1331525
RGD:10046014
G Abcb1a ATP binding cassette subfamily B member 1A JBrowse link 4 22,339,829 22,517,642 RGD:11554173
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase JBrowse link 3 10,041,820 10,145,076 RGD:8693409
RGD:8693592
G Ace angiotensin I converting enzyme JBrowse link 10 94,170,766 94,213,831 RGD:1331525
G Ache acetylcholinesterase JBrowse link 12 22,472,358 22,477,052 RGD:5509846
G Adcy5 adenylate cyclase 5 JBrowse link 11 68,695,839 68,842,452 RGD:13592920
G Adh1 alcohol dehydrogenase 1 (class I) JBrowse link 2 243,550,655 243,562,243 RGD:8554872
RGD:13592920
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide JBrowse link 2 243,500,540 243,516,865 RGD:13592920
G Afdn afadin, adherens junction formation factor JBrowse link 1 53,713,873 53,861,918 RGD:13838733
G Agtr1a angiotensin II receptor, type 1a JBrowse link 17 35,907,102 35,958,136 RGD:10047397
G Aif1 allograft inflammatory factor 1 JBrowse link 20 5,161,350 5,167,176 RGD:11554173
G Akt1 AKT serine/threonine kinase 1 JBrowse link 6 137,218,398 137,239,970 RGD:5509064
RGD:5509076
RGD:5509074
G Ang angiogenin JBrowse link 15 28,022,926 28,028,636 RGD:6892707
G Anxa5 annexin A5 JBrowse link 2 123,162,477 123,194,730 RGD:10053728
G Apaf1 apoptotic peptidase activating factor 1 JBrowse link 7 31,699,309 31,784,192 RGD:13503333
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:5508216
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:7771591
G Arpc3 actin related protein 2/3 complex, subunit 3 JBrowse link 12 39,653,951 39,667,817 RGD:11049454
G Atg7 autophagy related 7 JBrowse link 4 146,570,113 146,777,093 RGD:13592920
G Atm ATM serine/threonine kinase JBrowse link 8 58,015,938 58,119,973 RGD:10053605
G Atp13a2 ATPase cation transporting 13A2 JBrowse link 5 159,512,208 159,531,631 RGD:10450518
RGD:11554173
G Atxn2 ataxin 2 JBrowse link 12 40,264,601 40,335,637 RGD:13592920
G Aup1 AUP1, lipid droplet regulating VLDL assembly factor JBrowse link 4 113,887,030 113,890,103 RGD:8554872
G B2m beta-2 microglobulin JBrowse link 3 114,087,287 114,093,311 RGD:6482706
G Bag5 BCL2-associated athanogene 5 JBrowse link 6 136,180,640 136,185,651 RGD:11554173
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:1331525
RGD:8554872
RGD:11554173
RGD:10059346
RGD:8657025
G Bglap bone gamma-carboxyglutamate protein JBrowse link 2 187,741,770 187,748,445 RGD:7207224
G Bst1 bone marrow stromal cell antigen 1 JBrowse link 14 71,798,218 71,814,540 RGD:11554173
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:13503345
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:13503345
G Cast calpastatin JBrowse link 2 1,452,111 1,561,669 RGD:5509800
RGD:5683320
G Cck cholecystokinin JBrowse link 8 130,120,525 130,127,515 RGD:1626086
G Ccn2 cellular communication network factor 2 JBrowse link 1 21,851,657 21,854,773 RGD:2314505
G Cox10 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 JBrowse link 10 50,439,778 50,563,920 RGD:13592920
G Cp ceruloplasmin JBrowse link 2 104,744,249 104,803,034 RGD:11554173
G Crh corticotropin releasing hormone JBrowse link 2 104,459,999 104,461,863 RGD:5508835
G Crp C-reactive protein JBrowse link 13 91,080,448 91,081,358 RGD:6482307
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:5147678
RGD:5147681
RGD:5147679
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 JBrowse link 7 123,599,264 123,608,436 RGD:11554173
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 JBrowse link 1 213,511,892 213,522,195 RGD:11554173
G Dbh dopamine beta-hydroxylase JBrowse link 3 5,709,236 5,731,895 RGD:5129515
RGD:8554872
RGD:1358583
G Dbn1 drebrin 1 JBrowse link 17 9,679,511 9,693,878 RGD:10398811
G Ddc dopa decarboxylase JBrowse link 14 91,905,919 91,996,816 RGD:5129231
RGD:11554173
RGD:4139893
RGD:5129121
G Ddit4 DNA-damage-inducible transcript 4 JBrowse link 20 29,509,283 29,511,382 RGD:11554173
G Ddost dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit JBrowse link 5 156,668,924 156,676,036 RGD:8554872
G Dlg1 discs large MAGUK scaffold protein 1 JBrowse link 11 72,164,566 72,378,895 RGD:2306834
G Dlg4 discs large MAGUK scaffold protein 4 JBrowse link 10 56,625,845 56,655,543 RGD:2306834
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 JBrowse link 8 112,697,907 112,830,445 RGD:10450845
RGD:8554872
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 JBrowse link 5 120,330,372 120,492,515 RGD:10450521
G Drd1 dopamine receptor D1 JBrowse link 17 11,099,736 11,104,352 RGD:7248455
RGD:11554173
RGD:7248595
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:2311585
RGD:11554173
G Drd3 dopamine receptor D3 JBrowse link 11 61,819,102 61,883,223 RGD:5686418
RGD:5686419
G Drd5 dopamine receptor D5 JBrowse link 14 77,220,579 77,222,006 RGD:5686418
G Edn1 endothelin 1 JBrowse link 17 22,136,814 22,143,745 RGD:11554173
G Egf epidermal growth factor JBrowse link 2 68,820,616 68,895,537 RGD:10059679
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:2289955
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 JBrowse link 6 1,428,845 1,466,193 RGD:10395348
G Eif4g1 eukaryotic translation initiation factor 4 gamma, 1 JBrowse link 11 83,907,659 83,927,683 RGD:13592920
G En1 engrailed homeobox 1 JBrowse link 13 36,532,758 36,537,888 RGD:5687197
G Ephx1 epoxide hydrolase 1 JBrowse link 13 99,271,390 99,300,580 RGD:5490167
RGD:5688390
G Ephx2 epoxide hydrolase 2 JBrowse link 15 42,757,241 42,794,211 RGD:5688390
G Epo erythropoietin JBrowse link 12 22,274,828 22,278,268 RGD:10400901
G Erbb2 erb-b2 receptor tyrosine kinase 2 JBrowse link 10 86,367,596 86,391,728 RGD:2289955
G Esr2 estrogen receptor 2 JBrowse link 6 99,163,953 99,214,711 RGD:5508776
G Fas Fas cell surface death receptor JBrowse link 1 252,589,785 252,624,790 RGD:12903948
G Faslg Fas ligand JBrowse link 13 79,696,811 79,717,581 RGD:2290172
RGD:12903948
G Fbp1 fructose-bisphosphatase 1 JBrowse link 17 396,175 417,480 RGD:11554173
G Fbxo7 F-box protein 7 JBrowse link 7 23,815,246 23,843,505 RGD:10450518
RGD:8554872
G Fez1 fasciculation and elongation protein zeta 1 JBrowse link 8 39,305,128 39,350,270 RGD:13208826
G Fgb fibrinogen beta chain JBrowse link 2 182,028,044 182,035,026 RGD:11554173
G Fgf20 fibroblast growth factor 20 JBrowse link 16 55,152,748 55,159,352 RGD:8554872
G Gak cyclin G associated kinase JBrowse link 14 2,100,104 2,174,332 RGD:11554173
G Gba glucosylceramidase beta JBrowse link 2 188,511,781 188,522,602 RGD:5508422
RGD:8554872
RGD:12791016
RGD:11554173
RGD:10450521
RGD:10450518
RGD:5508429
RGD:5508427
RGD:5508425
G Gdf5 growth differentiation factor 5 JBrowse link 3 151,482,672 151,487,129 RGD:12738227
RGD:12738228
G Gdnf glial cell derived neurotrophic factor JBrowse link 2 56,884,181 56,912,964 RGD:6218968
RGD:11554173
G Gfap glial fibrillary acidic protein JBrowse link 10 90,990,762 90,999,435 RGD:11554173
G Gigyf2 GRB10 interacting GYF protein 2 JBrowse link 9 94,425,191 94,550,431 RGD:13592920
G Gjc2 gap junction protein, gamma 2 JBrowse link 10 45,526,740 45,535,520 RGD:13208520
G Gpr37 G protein-coupled receptor 37 JBrowse link 4 51,822,163 51,844,228 RGD:13504666
G Gpx1 glutathione peroxidase 1 JBrowse link 8 117,117,430 117,118,528 RGD:11554173
G Grk2 G protein-coupled receptor kinase 2 JBrowse link 1 219,536,220 219,544,329 RGD:5685370
G Grk3 G protein-coupled receptor kinase 3 JBrowse link 12 49,626,871 49,750,389 RGD:5685370
G Grk5 G protein-coupled receptor kinase 5 JBrowse link 1 282,265,371 282,467,842 RGD:5688382
RGD:5685370
RGD:5688384
G Grk6 G protein-coupled receptor kinase 6 JBrowse link 17 9,705,917 9,721,921 RGD:5684916
RGD:5685370
G Grn granulin precursor JBrowse link 10 90,377,103 90,383,207 RGD:10401642
RGD:10401644
G Gsk3b glycogen synthase kinase 3 beta JBrowse link 11 65,060,884 65,208,842 RGD:10045553
G Gsta4 glutathione S-transferase alpha 4 JBrowse link 8 85,497,557 85,514,732 RGD:5687772
RGD:11554173
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:5148019
RGD:11554173
RGD:7488959
RGD:5490167
G Gsto1 glutathione S-transferase omega 1 JBrowse link 1 267,607,437 267,617,387 RGD:1358651
RGD:5490299
G Gsto2 glutathione S-transferase omega 2 JBrowse link 1 267,617,517 267,640,455 RGD:5490299
RGD:1358651
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:1358669
RGD:11554173
G Gstt1 glutathione S-transferase theta 1 JBrowse link 20 13,799,102 13,816,527 RGD:5490165
G Hbb hemoglobin subunit beta JBrowse link 1 168,971,269 168,972,680 RGD:10449046
G Hcn3 hyperpolarization-activated cyclic nucleotide-gated potassium channel 3 JBrowse link 2 188,458,851 188,471,916 RGD:9693679
G Hfe homeostatic iron regulator JBrowse link 17 43,661,276 43,669,327 RGD:11554173
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:11554173
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase JBrowse link 2 27,480,224 27,500,654 RGD:5508459
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:11554173
G Hnmt histamine N-methyltransferase JBrowse link 3 905,111 937,038 RGD:5509775
RGD:5509778
G Hsf1 heat shock transcription factor 1 JBrowse link 7 117,538,523 117,565,478 RGD:10402545
RGD:10402753
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link 20 4,875,834 4,881,751 RGD:11554173
G Hspa4 heat shock protein family A (Hsp70) member 4 JBrowse link 10 38,601,624 38,642,397 RGD:5686884
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:6218982
RGD:6480228
RGD:6480203
G Hspa9 heat shock protein family A (Hsp70) member 9 JBrowse link 18 27,731,072 27,749,235 RGD:6784528
RGD:11554173
RGD:6784531
RGD:6784530
RGD:6784529
G Hspd1 heat shock protein family D (Hsp60) member 1 JBrowse link 9 61,680,529 61,691,202 RGD:10402846
G Htr1a 5-hydroxytryptamine receptor 1A JBrowse link 2 36,246,628 36,247,896 RGD:5683633
G Htra2 HtrA serine peptidase 2 JBrowse link 4 113,883,671 113,886,833 RGD:5688367
RGD:13592920
RGD:8554872
RGD:5688714
RGD:5688395
RGD:5688394
RGD:5688393
RGD:5688392
RGD:5688381
G Htt huntingtin JBrowse link 14 81,105,139 81,254,637 RGD:13452383
G Igf1r insulin-like growth factor 1 receptor JBrowse link 1 128,924,921 129,213,816 RGD:5686429
RGD:11554173
RGD:5129515
G Igf2 insulin-like growth factor 2 JBrowse link 1 215,828,102 215,839,081 RGD:5129515
RGD:11554173
G Igf2r insulin-like growth factor 2 receptor JBrowse link 1 48,176,095 48,264,482 RGD:11554173
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:1358742
RGD:7175549
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:11554173
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:11554173
G Insr insulin receptor JBrowse link 12 1,682,527 1,816,414 RGD:11554173
G Kcnj4 potassium voltage-gated channel subfamily J member 4 JBrowse link 7 120,717,378 120,744,602 RGD:11554173
G Kcnn2 potassium calcium-activated channel subfamily N member 2 JBrowse link 18 39,331,894 39,479,574 RGD:13592920
G Klk6 kallikrein related-peptidase 6 JBrowse link 1 99,762,195 99,769,486 RGD:1358597
G L1cam L1 cell adhesion molecule JBrowse link X 156,901,244 156,928,064 RGD:6483033
G Lep leptin JBrowse link 4 56,337,695 56,351,818 RGD:10053631
G Loxl3 lysyl oxidase-like 3 JBrowse link 4 113,866,782 113,883,713 RGD:8554872
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:5508399
RGD:8554872
RGD:11554173
RGD:10450521
RGD:10450518
RGD:5508420
RGD:5508416
RGD:5508415
RGD:5508409
RGD:5508408
RGD:5508406
RGD:5508404
G Mag myelin-associated glycoprotein JBrowse link 1 89,345,325 89,360,905 RGD:11554173
G Maoa monoamine oxidase A JBrowse link X 6,554,698 6,620,722 RGD:11554173
G Maob monoamine oxidase B JBrowse link X 6,430,694 6,533,520 RGD:2316771
RGD:11554173
RGD:1358484
G Map3k5 mitogen-activated protein kinase kinase kinase 5 JBrowse link 1 15,412,603 15,613,752 RGD:11554173
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:8158095
RGD:11554173
RGD:8158107
RGD:8158106
RGD:8158096
G Mc1r melanocortin 1 receptor JBrowse link 19 56,215,420 56,219,987 RGD:8554872
G Mir1 microRNA 1 JBrowse link 18 2,054,933 2,055,019 RGD:10755488
G Mir106a microRNA 106a JBrowse link X 140,117,891 140,117,968 RGD:10450788
G Mir132 microRNA 132 JBrowse link 10 62,014,995 62,015,095 RGD:10450788
G Mir181c microRNA 181c JBrowse link 19 25,290,211 25,290,316 RGD:11554173
G Mir19b1 microRNA 19b-1 JBrowse link 15 100,180,464 100,180,550 RGD:10755479
G Mir22 microRNA 22 JBrowse link 10 62,299,592 62,299,686 RGD:10755488
G Mir29b1 microRNA 29b-1 JBrowse link 4 58,344,310 58,344,390 RGD:10755479
G Mir301a microRNA 301a JBrowse link 10 74,417,746 74,417,845 RGD:10755479
G Mir34b microRNA 34b JBrowse link 8 55,492,542 55,492,625 RGD:10755477
G Mir34c microRNA 34c JBrowse link 8 55,492,024 55,492,100 RGD:10755477
G Mt-atp6 mitochondrially encoded ATP synthase 6 JBrowse link MT 7,919 8,599 RGD:5490292
G Mt-nd1 mitochondrially encoded NADH dehydrogenase 1 JBrowse link MT 2,740 3,694 RGD:5148018
RGD:8554872
RGD:8657117
RGD:5508706
G Mt-nd2 mitochondrially encoded NADH dehydrogenase 2 JBrowse link MT 3,904 4,942 RGD:2302313
RGD:5507832
G Mt-nd3 mitochondrially encoded NADH dehydrogenase 3 JBrowse link MT 9,451 9,798 RGD:5491206
RGD:8554872
RGD:5687692
RGD:5687691
G Mt-nd4 mitochondrially encoded NADH dehydrogenase 4 JBrowse link MT 10,160 11,537 RGD:5507832
G Mta1 metastasis associated 1 JBrowse link 6 137,911,302 137,950,066 RGD:11554173
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase JBrowse link 1 37,743,089 37,774,485 RGD:5508183
G Nanog Nanog homeobox JBrowse link 4 155,531,906 155,539,268 RGD:9681444
G Nat2 N-acetyltransferase 2 JBrowse link 16 23,960,709 23,991,570 RGD:2303766
G Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 JBrowse link 16 21,275,311 21,282,246 RGD:13504667
G Ndufb8 NADH:ubiquinone oxidoreductase subunit B8 JBrowse link 1 264,298,671 264,303,712 RGD:13504667
G Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 JBrowse link 9 69,919,863 69,953,182 RGD:6484690
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 JBrowse link 2 46,372,488 46,476,162 RGD:6484691
G Ndufv2 NADH:ubiquinone oxidoreductase core subunit V2 JBrowse link 9 113,875,718 113,900,169 RGD:2302386
G Nedd8 neural precursor cell expressed, developmentally down-regulated 8 JBrowse link 15 34,340,607 34,352,673 RGD:1549458
G Ngf nerve growth factor JBrowse link 2 204,886,158 204,939,523 RGD:11554173
G Ngfr nerve growth factor receptor JBrowse link 10 83,389,828 83,408,061 RGD:10413896
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:5132632
RGD:11554173
RGD:1358519
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:5509573
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link 19 38,422,210 38,437,103 RGD:11554173
G Nqo2 N-ribosyldihydronicotinamide:quinone reductase 2 JBrowse link 17 32,131,847 32,158,559 RGD:11073691
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 JBrowse link 3 43,111,258 43,128,391 RGD:1358553
RGD:13592920
RGD:8554872
G Ntsr1 neurotensin receptor 1 JBrowse link 3 175,982,313 176,046,345 RGD:9743906
G Ogg1 8-oxoguanine DNA glycosylase JBrowse link 4 145,282,828 145,289,367 RGD:8657142
G Optn optineurin JBrowse link 17 77,167,700 77,218,374 RGD:13432580
G Orc6 origin recognition complex, subunit 6 JBrowse link 19 27,457,541 27,464,804 RGD:8554872
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1601073
RGD:8554872
RGD:12880446
RGD:11554173
RGD:10450523
G Park7em1Sage parkinson protein 7; zinc finger nuclease induced mutant 1, Sigma Advanced Genetic Engineering Labs RGD:12880446
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:5510024
RGD:5510021
G Penk proenkephalin JBrowse link 5 17,056,412 17,061,762 RGD:10003114
G Phactr2 phosphatase and actin regulator 2 JBrowse link 1 7,352,050 7,633,991 RGD:6483095
G Pink1 PTEN induced putative kinase 1 JBrowse link 5 156,677,146 156,689,258 RGD:8554872
RGD:12880446
RGD:11554173
RGD:10450521
RGD:10450518
G Pink1em1Sage PTEN induced putative kinase 1; zinc finger nuclease induced mutant 1, Sigma Advanced Genetic Engineering Labs RGD:12880446
G Pitx3 paired-like homeodomain 3 JBrowse link 1 265,886,766 265,899,947 RGD:11535079
RGD:13592920
G Pla2g6 phospholipase A2 group VI JBrowse link 7 120,519,479 120,559,716 RGD:6482733
RGD:6482734
G Polg DNA polymerase gamma, catalytic subunit JBrowse link 1 141,172,117 141,188,893 RGD:8694175
RGD:8694203
RGD:8694201
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:6484270
RGD:6484271
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B JBrowse link 10 82,800,704 82,816,735 RGD:10043801
G Ppp2ca protein phosphatase 2 catalytic subunit alpha JBrowse link 10 37,534,449 37,554,861 RGD:8693390
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:737763
RGD:11554173
RGD:13432567
RGD:13432563
RGD:13432207
RGD:10450521
RGD:10450518
RGD:8693409
RGD:10413859
RGD:9693725
G Ptn pleiotrophin JBrowse link 4 64,239,156 64,330,996 RGD:10044022
G Rpl14 ribosomal protein L14 JBrowse link 8 129,240,528 129,243,400 RGD:11554173
G Rpl23a ribosomal protein L23a JBrowse link 10 65,441,295 65,443,981 RGD:11554173
G Rpl6 ribosomal protein L6 JBrowse link 12 40,877,578 40,882,032 RGD:11554173
G Rps8 ribosomal protein S8 JBrowse link 5 136,020,941 136,023,511 RGD:11554173
G Rrn3 RRN3 homolog, RNA polymerase I transcription factor JBrowse link 10 3,170,387 3,214,648 RGD:13592920
G RT1-Da RT1 class II, locus Da JBrowse link 20 4,127,644 4,132,616 RGD:5490158
RGD:11554173
G RT1-Db1 RT1 class II, locus Db1 JBrowse link 20 4,087,621 4,097,190 RGD:5147576
G S100b S100 calcium binding protein B JBrowse link 20 13,130,633 13,142,856 RGD:5508763
RGD:5508766
G Sdha succinate dehydrogenase complex flavoprotein subunit A JBrowse link 1 31,545,631 31,570,601 RGD:13504667
G Sept14 septin 14 JBrowse link 12 30,600,162 30,623,173 RGD:13504669
G Sept4 septin 4 JBrowse link 10 74,860,068 74,884,196 RGD:13504670
G Slc11a2 solute carrier family 11 member 2 JBrowse link 7 142,025,812 142,062,892 RGD:5688403
RGD:5688713
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:5131086
RGD:11554173
RGD:5131165
RGD:5131163
RGD:5131167
RGD:5129143
G Slc30a10 solute carrier family 30, member 10 JBrowse link 13 103,396,295 103,406,759 RGD:11554173
G Slc6a3 solute carrier family 6 member 3 JBrowse link 1 32,323,011 32,363,983 RGD:11554173
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:1302527
RGD:8554872
RGD:13506723
RGD:13506646
RGD:11554173
RGD:10450521
RGD:10450518
RGD:10450517
RGD:6480197
RGD:6480196
RGD:6480094
RGD:6478794
RGD:730239
G Sncaip synuclein, alpha interacting protein JBrowse link 18 47,739,284 47,877,679 RGD:8554872
RGD:13592920
G Sncb synuclein, beta JBrowse link 17 10,384,472 10,392,776 RGD:6478793
RGD:6480095
G Sncg synuclein, gamma JBrowse link 16 10,722,110 10,726,648 RGD:6480095
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:8655933
RGD:11554173
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:11554173
RGD:13464352
G Spr sepiapterin reductase JBrowse link 4 116,912,343 116,916,073 RGD:13592920
G Srrm2 serine/arginine repetitive matrix 2 JBrowse link 10 13,128,820 13,162,956 RGD:11038728
G Synj1 synaptojanin 1 JBrowse link 11 31,105,784 31,181,573 RGD:10450521
G Taldo1 transaldolase 1 JBrowse link 1 214,375,555 214,385,886 RGD:11554173
G Tardbp TAR DNA binding protein JBrowse link 5 165,432,089 165,442,232 RGD:5687172
RGD:5687183
G Tbp TATA box binding protein JBrowse link 1 57,491,381 57,509,335 RGD:13592920
G Tcn2 transcobalamin 2 JBrowse link 14 84,173,992 84,189,299 RGD:11060125
G Tdgf1 teratocarcinoma-derived growth factor 1 JBrowse link 8 119,215,266 119,220,909 RGD:11561895
G Tfam transcription factor A, mitochondrial JBrowse link 20 18,594,057 18,606,106 RGD:14389730
RGD:13592920
RGD:6771185
RGD:6771184
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:5129120
RGD:2289955
RGD:5128607
RGD:5128616
RGD:5129121
G Tmem230 transmembrane protein 230 JBrowse link 3 124,870,867 124,879,274 RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:11554173
G Tnfrsf1b TNF receptor superfamily member 1B JBrowse link 5 163,136,390 163,167,299 RGD:5130931
G Tnk2 tyrosine kinase, non-receptor, 2 JBrowse link 11 71,348,726 71,388,520 RGD:8554872
G Tnr tenascin R JBrowse link 13 77,602,249 77,678,385 RGD:8554872
G Twnk twinkle mtDNA helicase JBrowse link 1 264,756,060 264,762,892 RGD:13592920
G Uchl1 ubiquitin C-terminal hydrolase L1 JBrowse link 14 43,133,224 43,143,942 RGD:8554872
RGD:13592920
G Vdac1 voltage-dependent anion channel 1 JBrowse link 10 37,724,915 37,752,827 RGD:13504672
G Vdr vitamin D receptor JBrowse link 7 139,344,452 139,394,138 RGD:13217419
G Vip vasoactive intestinal peptide JBrowse link 1 42,169,307 42,177,582 RGD:5685606
G Vps13c vacuolar protein sorting 13 homolog C JBrowse link 8 73,682,814 73,843,290 RGD:8554872
G Vps35 VPS35 retromer complex component JBrowse link 19 27,464,937 27,500,636 RGD:8554872
RGD:11554173
RGD:10450845
RGD:10450521
RGD:10450518
Parkinson's Disease 11 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gigyf2 GRB10 interacting GYF protein 2 JBrowse link 9 94,425,191 94,550,431 RGD:8554872
RGD:7240710
Parkinson's Disease 13 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Htra2 HtrA serine peptidase 2 JBrowse link 4 113,883,671 113,886,833 RGD:7240710
RGD:8554872
G Loxl3 lysyl oxidase-like 3 JBrowse link 4 113,866,782 113,883,713 RGD:8554872
Parkinson's disease 17 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vps35 VPS35 retromer complex component JBrowse link 19 27,464,937 27,500,636 RGD:7240710
RGD:8554872
Parkinson's Disease 21 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 JBrowse link 8 112,697,907 112,830,445 RGD:7240710
RGD:8554872
Parkinson's Disease 5 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Uchl1 ubiquitin C-terminal hydrolase L1 JBrowse link 14 43,133,224 43,143,942 RGD:8554872
Parkinson's Disease 8 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:8554872
Parkinson's Disease, Mitochondrial term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adh1 alcohol dehydrogenase 1 (class I) JBrowse link 2 243,550,655 243,562,243 RGD:8554872
G Ndufv2 NADH:ubiquinone oxidoreductase core subunit V2 JBrowse link 9 113,875,718 113,900,169 RGD:8554872
Parkinsonian Disorders term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abat 4-aminobutyrate aminotransferase JBrowse link 10 7,093,406 7,200,439 RGD:9588554
G Abcc8 ATP binding cassette subfamily C member 8 JBrowse link 1 102,110,708 102,191,287 RGD:1598645
G Abcc9 ATP binding cassette subfamily C member 9 JBrowse link 4 176,806,098 176,928,540 RGD:1598645
G Adcy5 adenylate cyclase 5 JBrowse link 11 68,695,839 68,842,452 RGD:8554872
G Adcyap1 adenylate cyclase activating polypeptide 1 JBrowse link 9 121,705,897 121,725,736 RGD:2325295
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 JBrowse link 1 238,222,689 238,264,381 RGD:11554173
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 JBrowse link 8 77,640,234 77,719,488 RGD:11554173
G Ang angiogenin JBrowse link 15 28,022,926 28,028,636 RGD:6892711
G Apaf1 apoptotic peptidase activating factor 1 JBrowse link 7 31,699,309 31,784,192 RGD:13503334
G Aqp4 aquaporin 4 JBrowse link 18 6,766,009 6,782,757 RGD:5148006
G Atp13a2 ATPase cation transporting 13A2 JBrowse link 5 159,512,208 159,531,631 RGD:11554173
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 JBrowse link 1 81,852,423 81,881,565 RGD:11554173
G Bad BCL2-associated agonist of cell death JBrowse link 1 222,198,516 222,207,459 RGD:10053712
G Bdnf brain-derived neurotrophic factor JBrowse link 3 100,768,637 100,819,216 RGD:8657066
G Becn1 beclin 1 JBrowse link 10 89,209,944 89,225,297 RGD:6483312
RGD:11558014
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:13503337
RGD:13503339
RGD:13503338
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:13503344
G Ccl4 C-C motif chemokine ligand 4 JBrowse link 10 70,870,926 70,886,357 RGD:5683893
G Cnr1 cannabinoid receptor 1 JBrowse link 5 49,307,584 49,333,064 RGD:2314672
G Comt catechol-O-methyltransferase JBrowse link 11 86,715,981 86,735,630 RGD:2289785
G Csf1r colony stimulating factor 1 receptor JBrowse link 18 56,414,493 56,458,300 RGD:8554872
G Csf2 colony stimulating factor 2 JBrowse link 10 39,602,089 39,604,070 RGD:5131508
G Cx3cl1 C-X3-C motif chemokine ligand 1 JBrowse link 19 10,644,267 10,654,861 RGD:4891964
G Cx3cr1 C-X3-C motif chemokine receptor 1 JBrowse link 8 128,740,756 128,754,514 RGD:4891964
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 JBrowse link 8 62,472,087 62,478,122 RGD:5147675
G Dctn1 dynactin subunit 1 JBrowse link 4 114,876,770 114,896,567 RGD:11554173
G Ddc dopa decarboxylase JBrowse link 14 91,905,919 91,996,816 RGD:11554173
G Drd2 dopamine receptor D2 JBrowse link 8 53,678,777 53,743,643 RGD:6907448
RGD:11554173
G Drd3 dopamine receptor D3 JBrowse link 11 61,819,102 61,883,223 RGD:1358605
G Egfr epidermal growth factor receptor JBrowse link 14 99,919,485 100,104,136 RGD:2289955
G En1 engrailed homeobox 1 JBrowse link 13 36,532,758 36,537,888 RGD:5687199
G En2 engrailed homeobox 2 JBrowse link 4 438,668 444,508 RGD:5687199
G Eno2 enolase 2 JBrowse link 4 157,285,192 157,294,090 RGD:2293747
G Esr1 estrogen receptor 1 JBrowse link 1 41,192,029 41,594,799 RGD:8553241
G Fgf2 fibroblast growth factor 2 JBrowse link 2 124,081,072 124,134,133 RGD:13801017
G Fkbp1a FKBP prolyl isomerase 1A JBrowse link 3 147,042,944 147,062,725 RGD:2302074
G Gba glucosylceramidase beta JBrowse link 2 188,511,781 188,522,602 RGD:11554173
RGD:8554872
G Gdnf glial cell derived neurotrophic factor JBrowse link 2 56,884,181 56,912,964 RGD:5686884
RGD:11554173
RGD:8657066
RGD:6218962
G Gfra1 GDNF family receptor alpha 1 JBrowse link 1 279,203,046 279,572,789 RGD:6218962
RGD:6218972
G Gfra2 GDNF family receptor alpha 2 JBrowse link 15 52,557,004 52,648,984 RGD:6218972
G Gja1 gap junction protein, alpha 1 JBrowse link 20 37,876,650 37,889,097 RGD:8662444
G Gnal G protein subunit alpha L JBrowse link 18 62,805,406 62,946,133 RGD:13513924
G Grm8 glutamate metabotropic receptor 8 JBrowse link 4 54,474,344 55,409,526 RGD:6771180
G Gsk3a glycogen synthase kinase 3 alpha JBrowse link 1 82,097,244 82,108,238 RGD:10401814
G Gsr glutathione-disulfide reductase JBrowse link 16 62,197,617 62,239,987 RGD:5128840
RGD:11554173
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:10755712
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link 20 4,875,834 4,881,751 RGD:5147599
G Hspa9 heat shock protein family A (Hsp70) member 9 JBrowse link 18 27,731,072 27,749,235 RGD:6784518
G Htra2 HtrA serine peptidase 2 JBrowse link 4 113,883,671 113,886,833 RGD:11554173
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:1626658
G Kcnj11 potassium voltage-gated channel subfamily J member 11 JBrowse link 1 102,103,093 102,107,134 RGD:1598645
G Kcnj8 potassium voltage-gated channel subfamily J member 8 JBrowse link 4 176,783,287 176,789,143 RGD:1598645
G Lrrk2 leucine-rich repeat kinase 2 JBrowse link 7 132,857,311 133,018,549 RGD:5508414
RGD:11554173
RGD:8554872
G Lyn LYN proto-oncogene, Src family tyrosine kinase JBrowse link 5 16,526,058 16,642,648 RGD:1581410
G Manf mesencephalic astrocyte-derived neurotrophic factor JBrowse link 8 115,623,175 115,626,408 RGD:2325813
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:11554173
RGD:13801017
G Mmp3 matrix metallopeptidase 3 JBrowse link 8 5,676,608 5,698,579 RGD:8693688
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:13204850
G Mre11a MRE11 homolog A, double strand break repair nuclease JBrowse link 8 13,304,355 13,350,329 RGD:8554872
G Mt-co1 mitochondrially encoded cytochrome c oxidase I JBrowse link MT 5,323 6,867 RGD:2302296
G Mtor mechanistic target of rapamycin kinase JBrowse link 5 165,263,813 165,373,967 RGD:10040992
G Ndufs3 NADH:ubiquinone oxidoreductase core subunit S3 JBrowse link 3 79,721,686 79,728,863 RGD:13824972
G Nfkb2 nuclear factor kappa B subunit 2 JBrowse link 1 266,050,634 266,059,277 RGD:2302392
G Ngf nerve growth factor JBrowse link 2 204,886,158 204,939,523 RGD:11554173
G Nos1 nitric oxide synthase 1 JBrowse link 12 44,214,949 44,405,530 RGD:7257596
G Pacrg parkin coregulated JBrowse link 1 50,070,273 50,491,323 RGD:8554872
G Park7 Parkinsonism associated deglycase JBrowse link 5 167,982,438 168,004,724 RGD:1601076
RGD:13463458
RGD:13463452
RGD:13210569
RGD:13462067
RGD:11554173
G Parp1 poly (ADP-ribose) polymerase 1 JBrowse link 13 98,857,255 98,889,444 RGD:11554173
G Pde1b phosphodiesterase 1B JBrowse link 7 145,117,951 145,147,711 RGD:2312524
G Pdgfrb platelet derived growth factor receptor beta JBrowse link 18 56,364,586 56,406,381 RGD:8554872
G Pdyn prodynorphin JBrowse link 3 122,194,327 122,206,671 RGD:11554173
G Pink1 PTEN induced putative kinase 1 JBrowse link 5 156,677,146 156,689,258 RGD:11554173
RGD:13210569
G Pnoc prepronociceptin JBrowse link 15 48,805,841 48,833,071 RGD:11554173
G Polg DNA polymerase gamma, catalytic subunit JBrowse link 1 141,172,117 141,188,893 RGD:11554173
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:6484262
RGD:6484271
RGD:6484267
G Prkcd protein kinase C, delta JBrowse link 16 6,655,131 6,675,746 RGD:11554173
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:8554872
RGD:11554173
G Prkra protein activator of interferon induced protein kinase EIF2AK2 JBrowse link 3 63,489,081 63,507,918 RGD:11554173
G Prl prolactin JBrowse link 17 39,814,236 39,824,299 RGD:11554173
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:5508224
RGD:5688269
RGD:5688225
G Ranbp2 RAN binding protein 2 JBrowse link 20
20
28,027,054
28,365,538
28,076,664
28,375,676
RGD:9835348
G Rela RELA proto-oncogene, NF-kB subunit JBrowse link 1 220,992,770 221,003,249 RGD:2302392
G Ret ret proto-oncogene JBrowse link 4 150,202,170 150,249,196 RGD:6218972
G Rgs4 regulator of G-protein signaling 4 JBrowse link 13 88,054,817 88,061,108 RGD:13524517
G Rgs9 regulator of G-protein signaling 9 JBrowse link 10 97,509,971 97,582,188 RGD:13524532
RGD:13524864
RGD:13524862
G Shh sonic hedgehog signaling molecule JBrowse link 4 718,538 727,691 RGD:12859032
G Slc11a2 solute carrier family 11 member 2 JBrowse link 7 142,025,812 142,062,892 RGD:5688713
RGD:5688715
G Slc17a8 solute carrier family 17 member 8 JBrowse link 7 30,215,231 30,274,993 RGD:9999153
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:11554173
G Slc30a10 solute carrier family 30, member 10 JBrowse link 13 103,396,295 103,406,759 RGD:11554173
G Slc6a3 solute carrier family 6 member 3 JBrowse link 1 32,323,011 32,363,983 RGD:1625663
G Slc6a4 solute carrier family 6 member 4 JBrowse link 10 63,153,656 63,188,377 RGD:4889474
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:6478799
RGD:11554173
RGD:6478802
G Sncg synuclein, gamma JBrowse link 16 10,722,110 10,726,648 RGD:6478802
G Src SRC proto-oncogene, non-receptor tyrosine kinase JBrowse link 3 153,547,807 153,595,643 RGD:1581410
G Tbc1d24 TBC1 domain family, member 24 JBrowse link 10 13,551,100 13,576,739 RGD:8554872
G Tfam transcription factor A, mitochondrial JBrowse link 20 18,594,057 18,606,106 RGD:6484267
G Tgm6 transglutaminase 6 JBrowse link 3 122,644,183 122,680,054 RGD:8554872
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:1601634
RGD:13524532
RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:7247422
RGD:13503338
G Tnfrsf1b TNF receptor superfamily member 1B JBrowse link 5 163,136,390 163,167,299 RGD:7247422
G Tyrobp Tyro protein tyrosine kinase binding protein JBrowse link 1 88,875,370 88,879,305 RGD:8554872
G Ucn urocortin JBrowse link 6 26,602,144 26,602,974 RGD:5508188
G Vdac1 voltage-dependent anion channel 1 JBrowse link 10 37,724,915 37,752,827 RGD:13504672
G Vhl von Hippel-Lindau tumor suppressor JBrowse link 4 145,580,869 145,587,835 RGD:2325190
G Vip vasoactive intestinal peptide JBrowse link 1 42,169,307 42,177,582 RGD:5685601
Parkinsonism with Spasticity, X-Linked term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atp6ap2 ATPase H+ transporting accessory protein 2 JBrowse link X 11,137,889 11,164,854 RGD:7240710
RGD:8554872
G G6pd glucose-6-phosphate dehydrogenase JBrowse link X 156,274,800 156,293,935 RGD:8554872
Parkinsonism-Dystonia, Infantile term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc6a3 solute carrier family 6 member 3 JBrowse link 1 32,323,011 32,363,983 RGD:7240710
RGD:8554872
RGD:11554173
Parkinsonism-Dystonia, Infantile, 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc18a2 solute carrier family 18 member A2 JBrowse link 1 280,397,831 280,457,968 RGD:8554872
RGD:7240710
Perry syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dctn1 dynactin subunit 1 JBrowse link 4 114,876,770 114,896,567 RGD:5534575
RGD:8554872
RGD:7240710
RGD:5535748
Pick's disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atf2 activating transcription factor 2 JBrowse link 3 60,721,137 60,795,951 RGD:10047401
G Creb1 cAMP responsive element binding protein 1 JBrowse link 9 71,229,753 71,298,994 RGD:10047401
RGD:10047402
G Fos Fos proto-oncogene, AP-1 transcription factor subunit JBrowse link 6 109,300,433 109,303,299 RGD:10047402
G Hnmt histamine N-methyltransferase JBrowse link 3 905,111 937,038 RGD:5509779
G Map2k6 mitogen-activated protein kinase kinase 6 JBrowse link 10 98,707,160 98,823,054 RGD:7495833
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:7240710
RGD:8554872
RGD:11554173
G Psen1 presenilin 1 JBrowse link 6 107,169,514 107,221,000 RGD:7240710
RGD:8554872
RGD:11554173
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:6480200
G Sncb synuclein, beta JBrowse link 17 10,384,472 10,392,776 RGD:6480200
G Tardbp TAR DNA binding protein JBrowse link 5 165,432,089 165,442,232 RGD:5687194
progressive supranuclear palsy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 JBrowse link 4 98,648,513 98,709,695 RGD:11554173
G Map2k6 mitogen-activated protein kinase kinase 6 JBrowse link 10 98,707,160 98,823,054 RGD:7495833
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:7240710
RGD:8554872
RGD:11554173
RGD:8158100
RGD:8158099
RGD:8158095
G Mobp myelin-associated oligodendrocyte basic protein JBrowse link 8 128,824,420 128,854,492 RGD:11554173
G Nat2 N-acetyltransferase 2 JBrowse link 16 23,960,709 23,991,570 RGD:8552652
G Ogg1 8-oxoguanine DNA glycosylase JBrowse link 4 145,282,828 145,289,367 RGD:8657142
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:8655859
G Srsf2 serine and arginine rich splicing factor 2 JBrowse link 10 105,792,779 105,795,986 RGD:11554173
G Stx6 syntaxin 6 JBrowse link 13 72,804,218 72,850,757 RGD:11554173
G Tardbp TAR DNA binding protein JBrowse link 5 165,432,089 165,442,232 RGD:5687185
G Tra2b transformer 2 beta homolog JBrowse link 11 82,373,828 82,392,208 RGD:11554173
Progressive Supranuclear Palsy Atypical term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mapt microtubule-associated protein tau JBrowse link 10 92,289,002 92,386,517 RGD:7240710
RGD:8554872
pseudo-TORCH syndrome 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ocln occludin JBrowse link 2 30,527,327 30,577,218 RGD:7240710
RGD:8554872
secondary Parkinson disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb1a ATP binding cassette subfamily B member 1A JBrowse link 4 22,339,829 22,517,642 RGD:11554173
G Atp13a2 ATPase cation transporting 13A2 JBrowse link 5 159,512,208 159,531,631 RGD:11554173
G Cnr2 cannabinoid receptor 2 JBrowse link 5 154,242,010 154,268,126 RGD:11554173
G Gdnf glial cell derived neurotrophic factor JBrowse link 2 56,884,181 56,912,964 RGD:11554173
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:11554173
G Pon1 paraoxonase 1 JBrowse link 4 30,249,749 30,276,297 RGD:11554173
G Prkn parkin RBR E3 ubiquitin protein ligase JBrowse link 1 48,880,015 50,069,998 RGD:11554173
G Rgs2 regulator of G-protein signaling 2 JBrowse link 13 60,846,458 60,849,061 RGD:11554173
G Shh sonic hedgehog signaling molecule JBrowse link 4 718,538 727,691 RGD:11554173
G Tfam transcription factor A, mitochondrial JBrowse link 20 18,594,057 18,606,106 RGD:11554173
Shy-Drager Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Avp arginine vasopressin JBrowse link 3 123,117,482 123,119,460 RGD:11554173
G Coq2 coenzyme Q2, polyprenyltransferase JBrowse link 14 10,581,102 10,601,093 RGD:8554872
spinocerebellar ataxia type 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Atxn2 ataxin 2 JBrowse link 12 40,264,601 40,335,637 RGD:7240710
RGD:8554872
Spinocerebellar Ataxia, X-Linked 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcb7 ATP binding cassette subfamily B member 7 JBrowse link X 75,150,511 75,291,950 RGD:8554872
G Amer1 APC membrane recruitment protein 1 JBrowse link X 64,686,620 64,702,504 RGD:8554872
G Atp2b3 ATPase plasma membrane Ca2+ transporting 3 JBrowse link X 157,236,400 157,312,028 RGD:7240710
RGD:8554872
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:8554872
G Nhsl2 NHS-like 2 JBrowse link X 71,895,202 71,980,019 RGD:8554872
G Phka1 phosphorylase kinase regulatory subunit alpha 1 JBrowse link X 72,377,020 72,515,385 RGD:8554872
G Rtl9 retrotransposon Gag like 9 JBrowse link X 114,367,028 114,379,646 RGD:8554872
striatonigral degeneration term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nup62 nucleoporin 62 JBrowse link 1 100,811,140 100,827,119 RGD:13592920
G Pde8b phosphodiesterase 8B JBrowse link 2 24,718,548 24,955,533 RGD:13592920
Striatonigral Degeneration, Childhood-Onset term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vac14 Vac14, PIKFYVE complex component JBrowse link 19 40,927,007 41,029,206 RGD:8554872
RGD:7240710
Striatonigral Degeneration, Infantile term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il4i1 interleukin 4 induced 1 JBrowse link 1 100,811,727 100,836,901 RGD:8554872
G Nup62 nucleoporin 62 JBrowse link 1 100,811,140 100,827,119 RGD:7240710
RGD:8554872
Striatonigral Degeneration, Infantile, Mitochondrial term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt-atp6 mitochondrially encoded ATP synthase 6 JBrowse link MT 7,919 8,599 RGD:8554872
syndromic X-linked intellectual disability 5 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ap1s2 adaptor related protein complex 1 subunit sigma 2 JBrowse link X 32,329,883 32,376,301 RGD:7240710
RGD:8554872
RGD:11554173
G Cul4b cullin 4B JBrowse link X 124,831,391 124,870,329 RGD:8554872
torsion dystonia 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tor1a torsin family 1, member A JBrowse link 3 9,800,322 9,807,318 RGD:7240710
RGD:8554872
torsion dystonia 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hpca hippocalcin JBrowse link 5 147,295,124 147,305,757 RGD:8554872
RGD:7240710
torsion dystonia 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tubb4a tubulin, beta 4A class IVa JBrowse link 9 9,961,020 9,968,420 RGD:7240710
RGD:8554872
torsion dystonia 6 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Thap1 THAP domain containing 1 JBrowse link 16 70,661,360 70,665,831 RGD:7240710
RGD:8554872
RGD:11554173
Wilson disease term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G A2m alpha-2-macroglobulin JBrowse link 4 154,309,426 154,359,138 RGD:11554173
G Ahcy adenosylhomocysteinase JBrowse link 3 150,587,833 150,603,057 RGD:11554173
G Alg11 ALG11, alpha-1,2-mannosyltransferase JBrowse link 16 74,854,007 74,866,096 RGD:8554872
G Anks1b ankyrin repeat and sterile alpha motif domain containing 1B JBrowse link 7 30,507,135 31,684,604 RGD:11554173
G Anxa5 annexin A5 JBrowse link 2 123,162,477 123,194,730 RGD:10053726
RGD:11554173
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:11554173
G Asmt acetylserotonin O-methyltransferase JBrowse link 12 18,521,383 18,527,036 RGD:11554173
G Atp7a ATPase copper transporting alpha JBrowse link X 77,076,085 77,193,644 RGD:11340212
G Atp7b ATPase copper transporting beta JBrowse link 16 74,865,516 74,944,935 RGD:2292672
RGD:8554872
RGD:11554173
RGD:7240710
RGD:734622
G Atp7bhts ATPase copper transporting beta; hepatitis RGD:631728
RGD:2292672
G Bhmt betaine-homocysteine S-methyltransferase JBrowse link 2 23,236,573 23,256,158 RGD:11554173
G Brca2 BRCA2, DNA repair associated JBrowse link 12 503,660 544,754 RGD:8554872
G Camk2a calcium/calmodulin-dependent protein kinase II alpha JBrowse link 18 56,193,978 56,295,869 RGD:11554173
G Cp ceruloplasmin JBrowse link 2 104,744,249 104,803,034 RGD:11554173
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 JBrowse link 7 70,333,150 70,340,006 RGD:2307322
G Hamp hepcidin antimicrobial peptide JBrowse link 1 89,368,021 89,369,960 RGD:11554173
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase JBrowse link 2 27,480,224 27,500,654 RGD:2292672
G Il10 interleukin 10 JBrowse link 13 47,738,933 47,743,392 RGD:11554173
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:11554173
G Jag1 jagged canonical Notch ligand 1 JBrowse link 3 130,079,361 130,114,781 RGD:8554872
G Lox lysyl oxidase JBrowse link 18 47,500,320 47,577,819 RGD:11554173
G Loxl2 lysyl oxidase-like 2 JBrowse link 15 51,276,022 51,365,238 RGD:11554173
G Ndufb7 NADH:ubiquinone oxidoreductase subunit B7 JBrowse link 19 24,701,067 24,705,405 RGD:11554173
G Pkhd1 PKHD1, fibrocystin/polyductin JBrowse link 9 26,164,969 26,736,704 RGD:8554872
G Ppp3ca protein phosphatase 3 catalytic subunit alpha JBrowse link 2 241,909,332 242,186,861 RGD:11554173
G Ppp3cb protein phosphatase 3 catalytic subunit beta JBrowse link 15 4,209,702 4,236,895 RGD:11554173
G Prnp prion protein JBrowse link 3 124,515,917 124,531,320 RGD:11554173
G Ryr1 ryanodine receptor 1 JBrowse link 1 87,959,596 88,066,252 RGD:8554872
G Sdhaf2 succinate dehydrogenase complex assembly factor 2 JBrowse link 1 226,543,671 226,572,414 RGD:11554173
G Smpd1 sphingomyelin phosphodiesterase 1 JBrowse link 1 170,383,682 170,387,525 RGD:1601345
G Snca synuclein alpha JBrowse link 4 90,782,412 90,883,236 RGD:11554173
G Spg7 SPG7 matrix AAA peptidase subunit, paraplegin JBrowse link 19 55,880,549 55,914,729 RGD:8554872
G Timp1 TIMP metallopeptidase inhibitor 1 JBrowse link X 1,364,771 1,369,451 RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:11554173
Woodhouse Sakati Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dcaf17 DDB1 and CUL4 associated factor 17 JBrowse link 3 57,646,799 57,678,802 RGD:7240710
RGD:8554872
G Mettl8 methyltransferase like 8 JBrowse link 3 57,257,394 57,642,096 RGD:8554872

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14875
    disease of anatomical entity 14051
      nervous system disease 9116
        central nervous system disease 6913
          brain disease 6418
            basal ganglia disease 527
              Alopecia, Hypogonadism, Extrapyramidal Disorder 0
              DYSTONIA, CHILDHOOD-ONSET, WITH OPTIC ATROPHY AND BASAL GANGLIA ABNORMALITIES 1
              Dystonia Musculorum Deformans + 4
              Early Onset Parkinsonism with Mental Retardation 1
              Gilles de la Tourette syndrome + 10
              Huntington's disease + 143
              Meige syndrome 0
              Neuhauser Eichner Opitz Syndrome 0
              Pallidal Degeneration, Progressive, with Retinitis Pigmentosa 0
              Parkinsonian Disorders + 310
              Spastic Paraplegia with Associated Extrapyramidal Signs 0
              Wilson disease + 50
              Woodhouse Sakati Syndrome 2
              basal ganglia calcification + 24
              basal ganglia cerebrovascular disease + 0
              biotin-responsive basal ganglia disease 1
              chorea gravidarum 0
              frontotemporal dementia + 33
              multiple system atrophy + 28
              neuroleptic malignant syndrome 0
              pantothenate kinase-associated neurodegeneration + 4
              progressive supranuclear palsy + 11
              syndromic X-linked intellectual disability 5 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.