ONTOLOGY REPORT - ANNOTATIONS


Term:fundus dystrophy
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Accession:DOID:8501 term browser browse the term
Definition:A group of disorders involving predominantly the posterior portion of the ocular fundus, due to degeneration in the sensory layer of the RETINA; RETINAL PIGMENT EPITHELIUM; BRUCH MEMBRANE; CHOROID; or a combination of these tissues.
Synonyms:exact_synonym: Retinal Dystrophy;   retinal dystrophies
 primary_id: MESH:D058499;   RDO:0001838
For additional species annotation, visit the Alliance of Genome Resources.


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fundus dystrophy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca4 ATP binding cassette subfamily A member 4 JBrowse link 2 225,645,539 225,783,288 RGD:7829713
RGD:8554872
G Abhd12 abhydrolase domain containing 12 JBrowse link 3 146,630,298 146,690,375 RGD:8554872
G Adgra3 adhesion G protein-coupled receptor A3 JBrowse link 14 64,686,677 64,786,813 RGD:8554872
G Adgrv1 adhesion G protein-coupled receptor V1 JBrowse link 2 8,926,843 9,504,455 RGD:8554872
G Alms1 ALMS1, centrosome and basal body associated protein JBrowse link 4 117,371,544 117,472,310 RGD:8554872
G Arl2bp ADP-ribosylation factor like GTPase 2 binding protein JBrowse link 19 10,753,670 10,763,247 RGD:8554872
G Bbs1 Bardet-Biedl syndrome 1 JBrowse link 1 220,146,084 220,165,545 RGD:8554872
G Bbs10 Bardet-Biedl syndrome 10 JBrowse link 7 54,030,229 54,034,354 RGD:8554872
G Bbs4 Bardet-Biedl syndrome 4 JBrowse link 8 64,115,005 64,154,432 RGD:8554872
G Best1 bestrophin 1 JBrowse link 1 226,033,146 226,049,893 RGD:8554872
G C1qtnf5 C1q and TNF related 5 JBrowse link 8 48,443,515 48,445,639 RGD:8554872
G Cabp4 calcium binding protein 4 JBrowse link 1 219,383,452 219,388,009 RGD:8554872
G Cacna1f calcium voltage-gated channel subunit alpha1 F JBrowse link X 15,712,709 15,741,135 RGD:8554872
G Cdh23 cadherin-related 23 JBrowse link 20 29,857,018 30,263,758 RGD:8554872
G Cdh3 cadherin 3 JBrowse link 19 38,668,957 38,719,801 RGD:8554872
G Cdhr1 cadherin-related family member 1 JBrowse link 16 14,328,161 14,348,049 RGD:8554872
G Cdkl5 cyclin-dependent kinase-like 5 JBrowse link X 35,536,396 35,773,204 RGD:8554872
G Cep290 centrosomal protein 290 JBrowse link 7 40,217,269 40,306,327 RGD:8554872
G Cerkl ceramide kinase-like JBrowse link 3 66,268,835 66,395,615 RGD:8554872
G Cfap410 cilia and flagella associated protein 410 JBrowse link 20 11,417,428 11,424,301 RGD:8554872
G Chm CHM Rab escort protein JBrowse link X 84,666,900 84,821,775 RGD:8554872
G Clrn1 clarin 1 JBrowse link 2 149,049,925 149,088,787 RGD:8554872
G Cnga1 cyclic nucleotide gated channel alpha 1 JBrowse link 14 38,155,771 38,171,107 RGD:8554872
G Cnga3 cyclic nucleotide gated channel alpha 3 JBrowse link 9 43,807,412 43,858,225 RGD:8554872
G Cngb1 cyclic nucleotide gated channel beta 1 JBrowse link 19 10,142,440 10,206,618 RGD:8554872
G Cngb3 cyclic nucleotide gated channel beta 3 JBrowse link 5 33,097,353 33,507,467 RGD:8554872
G Col18a1 collagen type XVIII alpha 1 chain JBrowse link 20 12,225,202 12,332,858 RGD:8554872
G Crb1 crumbs cell polarity complex component 1 JBrowse link 13 56,270,519 56,462,893 RGD:8554872
G Crx cone-rod homeobox JBrowse link 1 77,744,593 77,758,913 RGD:8554872
G Ctnna1 catenin alpha 1 JBrowse link 18 27,923,229 28,055,972 RGD:8554872
G Dram2 DNA-damage regulated autophagy modulator 2 JBrowse link 2 209,160,901 209,189,641 RGD:8554872
G Fam161a FAM161 centrosomal protein A JBrowse link 14 107,785,029 107,803,765 RGD:8554872
G Fzd4 frizzled class receptor 4 JBrowse link 1 153,589,471 153,598,376 RGD:8554872
G Gphn gephyrin JBrowse link 6 101,327,874 101,859,169 RGD:8554872
G Guca1a guanylate cyclase activator 1A JBrowse link 9 15,609,804 15,620,030 RGD:8554872
G Gucy2d guanylate cyclase 2D, retinal JBrowse link 10 55,835,695 55,851,235 RGD:8554872
G Hgsnat heparan-alpha-glucosaminide N-acetyltransferase JBrowse link 16 70,876,557 70,909,443 RGD:8554872
G Impg2 interphotoreceptor matrix proteoglycan 2 JBrowse link 11 46,615,091 46,693,565 RGD:8554872
G Iqcb1 IQ motif containing B1 JBrowse link 11 66,824,059 66,878,585 RGD:8554872
G Kcnv2 potassium voltage-gated channel modifier subfamily V member 2 JBrowse link 1 245,396,880 245,475,011 RGD:8554872
G Lca5 lebercilin LCA5 JBrowse link 8 90,926,309 90,984,271 RGD:8554872
G Lrat lecithin retinol acyltransferase JBrowse link 2 181,896,304 181,905,366 RGD:8554872
G Lrp2 LDL receptor related protein 2 JBrowse link 3 55,665,153 55,822,484 RGD:8554872
G Lrp5 LDL receptor related protein 5 JBrowse link 1 218,816,833 218,920,147 RGD:8554872
G Mertk MER proto-oncogene, tyrosine kinase JBrowse link 3 121,235,230 121,340,932 RGD:8554872
G Mfrp membrane frizzled-related protein JBrowse link 8 48,437,720 48,443,421 RGD:8554872
G Mfsd8 major facilitator superfamily domain containing 8 JBrowse link 2 127,706,618 127,784,129 RGD:8554872
G Myo7a myosin VIIA JBrowse link 1 163,001,313 163,071,545 RGD:8554872
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 JBrowse link 5 166,409,460 166,430,291 RGD:8554872
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 JBrowse link 8 64,797,518 64,801,587 RGD:8554872
G Nrl neural retina leucine zipper JBrowse link 15 34,197,115 34,201,408 RGD:8554872
G Otx2 orthodenticle homeobox 2 JBrowse link 15 25,500,037 25,511,619 RGD:8554872
G Pax2 paired box 2 JBrowse link 1 264,493,579 264,585,073 RGD:8554872
G Pcare photoreceptor cilium actin regulator JBrowse link 6 23,337,507 23,346,232 RGD:8554872
G Pcdh15 protocadherin related 15 JBrowse link 20 14,952,213 15,334,745 RGD:8554872
G Pde6a phosphodiesterase 6A JBrowse link 18 56,544,652 56,617,480 RGD:8554872
G Pde6b phosphodiesterase 6B JBrowse link 14 2,328,690 2,371,913 RGD:8554872
G Pde6c phosphodiesterase 6C JBrowse link 1 256,822,099 256,885,879 RGD:8554872
G Prom1 prominin 1 JBrowse link 14 71,532,321 71,637,400 RGD:8554872
G Prpf31 pre-mRNA processing factor 31 JBrowse link 1 64,150,786 64,162,461 RGD:8554872
G Prpf8 pre-mRNA processing factor 8 JBrowse link 10 63,635,239 63,658,360 RGD:8554872
G Prph2 peripherin 2 JBrowse link 9 16,085,933 16,386,176 RGD:8553224
RGD:8554872
G Prps1 phosphoribosyl pyrophosphate synthetase 1 JBrowse link X 111,798,233 111,820,270 RGD:8554872
G Prss23 serine protease 23 JBrowse link 1 153,732,528 153,742,111 RGD:8554872
G Rbp3 retinol binding protein 3 JBrowse link 16 10,277,775 10,286,243 RGD:8554872
G Rdh12 retinol dehydrogenase 12 JBrowse link 6 102,392,828 102,405,750 RGD:8554872
RGD:11554173
G Rdh5 retinol dehydrogenase 5 JBrowse link 7 3,335,681 3,342,573 RGD:8554872
G Rgr retinal G protein coupled receptor JBrowse link 16 14,286,323 14,300,972 RGD:8554872
G Rlbp1 retinaldehyde binding protein 1 JBrowse link 1 141,097,789 141,111,375 RGD:8554872
G Rp1 RP1, axonemal microtubule associated JBrowse link 5 15,005,028 15,060,508 RGD:8554872
G Rp2 RP2 activator of ARL3 GTPase JBrowse link X 2,066,298 2,116,661 RGD:8554872
G Rpe65 retinoid isomerohydrolase RPE65 JBrowse link 2 266,141,581 266,169,197 RGD:8554872
RGD:11554173
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 14,271,012 14,331,745 RGD:8554872
RGD:11554173
G Rpgrip1 RPGR interacting protein 1 JBrowse link 15 28,521,287 28,575,046 RGD:8554872
RGD:11554173
G Rs1 retinoschisin 1 JBrowse link X 35,749,957 35,777,243 RGD:8554872
G Slc19a1 solute carrier family 19 member 1 JBrowse link 20 12,334,675 12,354,517 RGD:8554872
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 JBrowse link 3 119,640,324 119,669,651 RGD:8554872
G Spata7 spermatogenesis associated 7 JBrowse link 6 122,603,248 122,648,718 RGD:8554872
G Topors TOP1 binding arginine/serine rich protein JBrowse link 5 56,554,956 56,566,503 RGD:8554872
G Ush1c USH1 protein network component harmonin JBrowse link 1 102,207,096 102,256,779 RGD:8554872
G Ush2a usherin JBrowse link 13 106,750,738 107,434,195 RGD:8554872
G Vps13b vacuolar protein sorting 13 homolog B JBrowse link 7 74,118,834 74,722,341 RGD:8554872
G Whrn whirlin JBrowse link 5 79,235,541 79,317,206 RGD:8554872
G Zdhhc24 zinc finger, DHHC-type containing 24 JBrowse link 1 220,137,280 220,143,387 RGD:8554872
G Zfyve26 zinc finger FYVE-type containing 26 JBrowse link 6 102,409,235 102,472,962 RGD:8554872
Alstrom syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alms1 ALMS1, centrosome and basal body associated protein JBrowse link 4 117,371,544 117,472,310 RGD:1601169
RGD:8554872
RGD:11554173
RGD:8696018
RGD:8696016
RGD:8696015
RGD:8696013
RGD:7240710
G Polr3b RNA polymerase III subunit B JBrowse link 7 24,745,051 24,851,227 RGD:8554872
Amaurosis Hypertrichosis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cnnm4 cyclin and CBS domain divalent metal cation transport mediator 4 JBrowse link 9 43,049,587 43,088,690 RGD:11554173
Bothnia retinal dystrophy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rlbp1 retinaldehyde binding protein 1 JBrowse link 1 141,097,789 141,111,375 RGD:7240710
RGD:8554872
Chorioretinal Dystrophy, Spinocerebellar Ataxia, and Hypogonadotropic Hypogonadism term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pnpla6 patatin-like phospholipase domain containing 6 JBrowse link 12 2,068,749 2,098,139 RGD:7240710
RGD:8554872
Chromosome Xp11.3 Deletion Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rp2 RP2 activator of ARL3 GTPase JBrowse link X 2,066,298 2,116,661 RGD:7240710
Cone Dystrophy 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pde6c phosphodiesterase 6C JBrowse link 1 256,822,099 256,885,879 RGD:7240710
RGD:8554872
Cone Rod Dystrophy Amelogenesis Imperfecta term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cnnm4 cyclin and CBS domain divalent metal cation transport mediator 4 JBrowse link 9 43,049,587 43,088,690 RGD:8554872
cone-rod dystrophy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca4 ATP binding cassette subfamily A member 4 JBrowse link 2 225,645,539 225,783,288 RGD:8554872
G Abhd12 abhydrolase domain containing 12 JBrowse link 3 146,630,298 146,690,375 RGD:8554872
G Acbd5 acyl-CoA binding domain containing 5 JBrowse link 17 89,882,465 89,923,982 RGD:8554872
G Bbs5 Bardet-Biedl syndrome 5 JBrowse link 3 55,886,695 55,907,717 RGD:8554872
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin JBrowse link 1 225,035,956 225,046,137 RGD:8554872
G Cabp4 calcium binding protein 4 JBrowse link 1 219,383,452 219,388,009 RGD:8554872
G Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 JBrowse link 4 151,298,548 151,409,263 RGD:8554872
G Cdhr1 cadherin-related family member 1 JBrowse link 16 14,328,161 14,348,049 RGD:8554872
G Cerkl ceramide kinase-like JBrowse link 3 66,268,835 66,395,615 RGD:8554872
G Cfap410 cilia and flagella associated protein 410 JBrowse link 20 11,417,428 11,424,301 RGD:8554872
G Cnga3 cyclic nucleotide gated channel alpha 3 JBrowse link 9 43,807,412 43,858,225 RGD:8554872
G Crb1 crumbs cell polarity complex component 1 JBrowse link 13 56,270,519 56,462,893 RGD:13451130
G Fam161a FAM161 centrosomal protein A JBrowse link 14 107,785,029 107,803,765 RGD:8554872
G Guca1a guanylate cyclase activator 1A JBrowse link 9 15,609,804 15,620,030 RGD:8554872
G Guca1b guanylate cyclase activator 1B JBrowse link 9 15,621,083 15,629,017 RGD:8554872
G Gucy2d guanylate cyclase 2D, retinal JBrowse link 10 55,835,695 55,851,235 RGD:8554872
G Mall mal, T-cell differentiation protein-like JBrowse link 3 120,272,583 120,307,090 RGD:8554872
G Mir103a2 microRNA 103a-2 JBrowse link 3 123,833,671 123,833,756 RGD:8554872
G Mtln mitoregulin JBrowse link 3 120,372,665 120,373,523 RGD:8554872
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 JBrowse link 5 166,409,460 166,430,291 RGD:8554872
G Nphp1 nephrocystin 1 JBrowse link 3 120,316,048 120,370,089 RGD:8554872
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 JBrowse link 8 64,797,518 64,801,587 RGD:8554872
G Pank2 pantothenate kinase 2 JBrowse link 3 123,807,911 123,841,797 RGD:8554872
G Prph2 peripherin 2 JBrowse link 9 16,085,933 16,386,176 RGD:8554872
G Rgr retinal G protein coupled receptor JBrowse link 16 14,286,323 14,300,972 RGD:8554872
G Rpe65 retinoid isomerohydrolase RPE65 JBrowse link 2 266,141,581 266,169,197 RGD:8554872
G Scaper S-phase cyclin A-associated protein in the ER JBrowse link 8 60,127,039 60,593,568 RGD:8554872
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 JBrowse link 3 119,640,324 119,669,651 RGD:8554872
G Unc119 unc-119 lipid binding chaperone JBrowse link 10 65,606,919 65,612,324 RGD:8554872
G Ush2a usherin JBrowse link 13 106,750,738 107,434,195 RGD:8554872
cone-rod dystrophy 10 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sema4a semaphorin 4A JBrowse link 2 187,799,568 187,823,014 RGD:7240710
RGD:8554872
cone-rod dystrophy 12 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prom1 prominin 1 JBrowse link 14 71,532,321 71,637,400 RGD:7240710
RGD:8554872
cone-rod dystrophy 13 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpgrip1 RPGR interacting protein 1 JBrowse link 15 28,521,287 28,575,046 RGD:7240710
RGD:8554872
cone-rod dystrophy 14 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 JBrowse link 4 151,298,548 151,409,263 RGD:8554872
G Guca1a guanylate cyclase activator 1A JBrowse link 9 15,609,804 15,620,030 RGD:7240710
RGD:8554872
G Kcnv2 potassium voltage-gated channel modifier subfamily V member 2 JBrowse link 1 245,396,880 245,475,011 RGD:8554872
G Pde6h phosphodiesterase 6H JBrowse link 4 170,947,723 170,963,046 RGD:8554872
cone-rod dystrophy 15 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdhr1 cadherin-related family member 1 JBrowse link 16 14,328,161 14,348,049 RGD:7240710
RGD:8554872
cone-rod dystrophy 16 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G MGC94199 similar to RIKEN cDNA 2610301B20; EST AI428449 JBrowse link 5
5
24,145,829
23,358,464
24,165,467
23,377,697
RGD:7240710
RGD:8554872
cone-rod dystrophy 18 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rab28 RAB28, member RAS oncogene family JBrowse link 14 73,888,968 73,963,209 RGD:7240710
RGD:8554872
cone-rod dystrophy 19 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ttll5 tubulin tyrosine ligase like 5 JBrowse link 6 109,693,915 109,910,479 RGD:7240710
RGD:8554872
cone-rod dystrophy 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crx cone-rod homeobox JBrowse link 1 77,744,593 77,758,913 RGD:7240710
RGD:8554872
G Prom1 prominin 1 JBrowse link 14 71,532,321 71,637,400 RGD:8554872
cone-rod dystrophy 20 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Poc1b POC1 centriolar protein B JBrowse link 7 41,304,119 41,404,360 RGD:7240710
RGD:8554872
Cone-Rod Dystrophy 21 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dram2 DNA-damage regulated autophagy modulator 2 JBrowse link 2 209,160,901 209,189,641 RGD:7240710
RGD:8554872
cone-rod dystrophy 3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca4 ATP binding cassette subfamily A member 4 JBrowse link 2 225,645,539 225,783,288 RGD:7240710
RGD:8554872
cone-rod dystrophy 5 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pitpnm3 PITPNM family member 3 JBrowse link 10 58,618,679 58,722,679 RGD:7240710
RGD:8554872
cone-rod dystrophy 6 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gucy2d guanylate cyclase 2D, retinal JBrowse link 10 55,835,695 55,851,235 RGD:7240710
RGD:8554872
cone-rod dystrophy 7 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rims1 regulating synaptic membrane exocytosis 1 JBrowse link 9 28,440,408 28,973,246 RGD:7240710
RGD:8554872
cone-rod dystrophy 9 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adam9 ADAM metallopeptidase domain 9 JBrowse link 16 71,810,377 71,887,926 RGD:7240710
RGD:8554872
Cone-Rod Dystrophy and Hearing Loss term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cep78 centrosomal protein 78 JBrowse link 1 233,185,815 233,214,876 RGD:8554872
RGD:7240710
Cone-Rod Dystrophy and Hearing Loss 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cep250 centrosomal protein 250 JBrowse link 3 151,508,366 151,544,631 RGD:7240710
Cutis Verticis Gyrata, Retinitis Pigmentosa, and Sensorineural Deafness term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vps13b vacuolar protein sorting 13 homolog B JBrowse link 7 74,118,834 74,722,341 RGD:8554872
fundus albipunctatus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mfrp membrane frizzled-related protein JBrowse link 8 48,437,720 48,443,421 RGD:13592920
G Prph2 peripherin 2 JBrowse link 9 16,085,933 16,386,176 RGD:7240710
RGD:8554872
RGD:8553223
G Rdh5 retinol dehydrogenase 5 JBrowse link 7 3,335,681 3,342,573 RGD:7240710
RGD:8554872
RGD:11554173
G Rho rhodopsin JBrowse link 4 147,832,136 147,837,298 RGD:7240710
RGD:8554872
G Rlbp1 retinaldehyde binding protein 1 JBrowse link 1 141,097,789 141,111,375 RGD:7240710
RGD:8554872
isolated microphthalmia 5 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C1qtnf5 C1q and TNF related 5 JBrowse link 8 48,443,515 48,445,639 RGD:8554872
G Mfrp membrane frizzled-related protein JBrowse link 8 48,437,720 48,443,421 RGD:7240710
RGD:8554872
RGD:11553925
Jalili Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chst5 carbohydrate sulfotransferase 5 JBrowse link 19 44,115,065 44,136,092 RGD:7240710
Kearns-Sayre syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Il1a interleukin 1 alpha JBrowse link 3 121,824,712 121,836,122 RGD:11554173
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:11554173
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:7241824
G Tfam transcription factor A, mitochondrial JBrowse link 20 18,594,057 18,606,106 RGD:13592920
Leber congenital amaurosis 14 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lrat lecithin retinol acyltransferase JBrowse link 2 181,896,304 181,905,366 RGD:7240710
RGD:8554872
Leber congenital amaurosis 3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Spata7 spermatogenesis associated 7 JBrowse link 6 122,603,248 122,648,718 RGD:7240710
RGD:8554872
MACULAR DYSTROPHY WITH CENTRAL CONE INVOLVEMENT term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mfsd8 major facilitator superfamily domain containing 8 JBrowse link 2 127,706,618 127,784,129 RGD:7240710
RGD:8554872
Metaphyseal Chondrodysplasia with Retinitis Pigmentosa term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cwc27 CWC27 spliceosome associated cyclophilin JBrowse link 2 34,716,420 34,923,060 RGD:8554872
RGD:7240710
Neuropathy Ataxia and Retinitis Pigmentosa term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt-atp6 mitochondrially encoded ATP synthase 6 JBrowse link MT 7,919 8,599 RGD:13825442
RGD:8554872
RGD:11554173
Newfoundland cone-rod dystrophy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rlbp1 retinaldehyde binding protein 1 JBrowse link 1 141,097,789 141,111,375 RGD:7240710
RGD:8554872
Oliver-McFarlane Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pnpla6 patatin-like phospholipase domain containing 6 JBrowse link 12 2,068,749 2,098,139 RGD:8554872
RGD:7240710
patterned macular dystrophy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctnna1 catenin alpha 1 JBrowse link 18 27,923,229 28,055,972 RGD:11554173
G Htra1 HtrA serine peptidase 1 JBrowse link 1 201,499,067 201,548,508 RGD:7394745
G Mapkapk3 mitogen-activated protein kinase-activated protein kinase 3 JBrowse link 8 116,012,126 116,046,012 RGD:11554173
G Prph2 peripherin 2 JBrowse link 9 16,085,933 16,386,176 RGD:8553221
RGD:11554173
RGD:8554872
RGD:8554864
RGD:8553238
RGD:8553236
patterned macular dystrophy 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prph2 peripherin 2 JBrowse link 9 16,085,933 16,386,176 RGD:7240710
patterned macular dystrophy 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctnna1 catenin alpha 1 JBrowse link 18 27,923,229 28,055,972 RGD:8554872
RGD:7240710
patterned macular dystrophy 3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mapkapk3 mitogen-activated protein kinase-activated protein kinase 3 JBrowse link 8 116,012,126 116,046,012 RGD:8554872
RGD:7240710
PHARC syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abhd12 abhydrolase domain containing 12 JBrowse link 3 146,630,298 146,690,375 RGD:7240710
RGD:8554872
Posterior Column Ataxia with Retinitis Pigmentosa term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Flvcr1 feline leukemia virus subgroup C cellular receptor 1 JBrowse link 13 109,624,167 109,629,609 RGD:7240710
RGD:8554872
Retinal Cone Dystrophy 3A term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pde6h phosphodiesterase 6H JBrowse link 4 170,947,723 170,963,046 RGD:7240710
RGD:8554872
Retinal Cone Dystrophy 3B term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kcnv2 potassium voltage-gated channel modifier subfamily V member 2 JBrowse link 1 245,396,880 245,475,011 RGD:7240710
RGD:8554872
Retinal Cone Dystrophy 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 JBrowse link 4 151,298,548 151,409,263 RGD:7240710
RGD:8554872
RETINAL DYSTROPHY AND IRIS COLOBOMA WITH OR WITHOUT CONGENITAL CATARACT term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mir204 microRNA 204 JBrowse link 1 240,403,000 240,403,109 RGD:7240710
RGD:8554872
G Trpm3 transient receptor potential cation channel, subfamily M, member 3 JBrowse link 1 239,741,572 240,757,583 RGD:8554872
Retinal Dystrophy and Obesity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ric3 RIC3 acetylcholine receptor chaperone JBrowse link 1 173,629,218 173,682,226 RGD:8554872
G Tub tubby bipartite transcription factor JBrowse link 1 173,550,929 173,629,550 RGD:8554872
RGD:7240710
RETINAL DYSTROPHY WITH INNER RETINAL DYSFUNCTION AND GANGLION CELL ABNORMALITIES term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Itm2b integral membrane protein 2B JBrowse link 15 55,254,703 55,277,713 RGD:8554872
RGD:7240710
RETINAL DYSTROPHY WITH OR WITHOUT EXTRAOCULAR ANOMALIES term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rcbtb1 RCC1 and BTB domain containing protein 1 JBrowse link 15 39,622,572 39,665,335 RGD:8554872
RGD:7240710
RETINAL DYSTROPHY WITH OR WITHOUT MACULAR STAPHYLOMA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cfap410 cilia and flagella associated protein 410 JBrowse link 20 11,417,428 11,424,301 RGD:8554872
RGD:7240710
Retinal Dystrophy, Early Onset Severe term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca4 ATP binding cassette subfamily A member 4 JBrowse link 2 225,645,539 225,783,288 RGD:8554872
Retinal Dystrophy, Iris Coloboma, and Comedogenic Acne Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rbp4 retinol binding protein 4 JBrowse link 1 256,806,476 256,813,678 RGD:7240710
RGD:8554872
Retinal Dystrophy, Juvenile Cataracts, and Short Stature Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gphn gephyrin JBrowse link 6 101,327,874 101,859,169 RGD:8554872
G Rdh11 retinol dehydrogenase 11 JBrowse link 6 102,356,498 102,372,618 RGD:7240710
RGD:8554872
retinitis pigmentosa term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca4 ATP binding cassette subfamily A member 4 JBrowse link 2 225,645,539 225,783,288 RGD:1598552
RGD:8554872
RGD:11554173
RGD:8547535
G Abhd12 abhydrolase domain containing 12 JBrowse link 3 146,630,298 146,690,375 RGD:8554872
G Acacb acetyl-CoA carboxylase beta JBrowse link 12 48,127,149 48,238,969 RGD:8554872
G Acan aggrecan JBrowse link 1 140,762,758 140,824,441 RGD:11570529
G Acbd5 acyl-CoA binding domain containing 5 JBrowse link 17 89,882,465 89,923,982 RGD:8554872
G Adam9 ADAM metallopeptidase domain 9 JBrowse link 16 71,810,377 71,887,926 RGD:8554872
G Ahi1 Abelson helper integration site 1 JBrowse link 1 16,478,127 16,601,769 RGD:8554872
G Aifm1 apoptosis inducing factor, mitochondria associated 1 JBrowse link X 135,304,063 135,343,062 RGD:10053563
G Aipl1 aryl hydrocarbon receptor-interacting protein-like 1 JBrowse link 10 58,599,690 58,631,194 RGD:8696011
RGD:8554872
RGD:11554173
G Arl6 ADP-ribosylation factor like GTPase 6 JBrowse link 11 42,858,476 42,884,324 RGD:8554872
RGD:11554173
G Atf6 activating transcription factor 6 JBrowse link 13 89,053,457 89,242,531 RGD:11554173
G Bbs1 Bardet-Biedl syndrome 1 JBrowse link 1 220,146,084 220,165,545 RGD:8554872
G Bbs10 Bardet-Biedl syndrome 10 JBrowse link 7 54,030,229 54,034,354 RGD:8554872
G Bbs5 Bardet-Biedl syndrome 5 JBrowse link 3 55,886,695 55,907,717 RGD:8554872
G Bcan brevican JBrowse link 2 187,359,674 187,373,133 RGD:14392802
G Best1 bestrophin 1 JBrowse link 1 226,033,146 226,049,893 RGD:8547535
RGD:8554872
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin JBrowse link 1 225,035,956 225,046,137 RGD:8554872
G Ca4 carbonic anhydrase 4 JBrowse link 10 72,272,286 72,281,069 RGD:1600730
RGD:8554872
G Cabp4 calcium binding protein 4 JBrowse link 1 219,383,452 219,388,009 RGD:8554872
G Cacna1f calcium voltage-gated channel subunit alpha1 F JBrowse link X 15,712,709 15,741,135 RGD:8554872
G Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 JBrowse link 4 151,298,548 151,409,263 RGD:8554872
G Casp7 caspase 7 JBrowse link 1 277,190,557 277,242,779 RGD:8548491
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:8158049
G Ccdc66 coiled-coil domain containing 66 JBrowse link 16 3,107,119 3,139,188 RGD:13592920
G Cdh23 cadherin-related 23 JBrowse link 20 29,857,018 30,263,758 RGD:8547536
G Cdhr1 cadherin-related family member 1 JBrowse link 16 14,328,161 14,348,049 RGD:8554872
G Cep290 centrosomal protein 290 JBrowse link 7 40,217,269 40,306,327 RGD:8554872
G Cerkl ceramide kinase-like JBrowse link 3 66,268,835 66,395,615 RGD:1600829
RGD:8554872
G Cfap410 cilia and flagella associated protein 410 JBrowse link 20 11,417,428 11,424,301 RGD:8554872
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin JBrowse link 1 197,986,384 197,999,726 RGD:8554872
G Clrn1 clarin 1 JBrowse link 2 149,049,925 149,088,787 RGD:634439
RGD:8554872
RGD:11554173
RGD:8547535
G Cnga1 cyclic nucleotide gated channel alpha 1 JBrowse link 14 38,155,771 38,171,107 RGD:1300380
RGD:8554872
RGD:11554173
RGD:8547535
G Cnga3 cyclic nucleotide gated channel alpha 3 JBrowse link 9 43,807,412 43,858,225 RGD:8554872
G Cngb1 cyclic nucleotide gated channel beta 1 JBrowse link 19 10,142,440 10,206,618 RGD:734793
RGD:8554872
RGD:11554173
RGD:8547535
G Cngb3 cyclic nucleotide gated channel beta 3 JBrowse link 5 33,097,353 33,507,467 RGD:8554872
G Col18a1 collagen type XVIII alpha 1 chain JBrowse link 20 12,225,202 12,332,858 RGD:8554872
G Crb1 crumbs cell polarity complex component 1 JBrowse link 13 56,270,519 56,462,893 RGD:1600966
RGD:8554872
RGD:11554173
RGD:8552697
G Crb2 crumbs cell polarity complex component 2 JBrowse link 3 22,037,812 22,061,247 RGD:8552786
RGD:13592920
G Crx cone-rod homeobox JBrowse link 1 77,744,593 77,758,913 RGD:8547535
RGD:8554872
RGD:11554173
G Cygb cytoglobin JBrowse link 10 105,618,325 105,628,091 RGD:8554872
G Cyp4v3 cytochrome P450, family 4, subfamily v, polypeptide 3 JBrowse link 16 50,111,803 50,136,741 RGD:8554872
G Dhdds dehydrodolichyl diphosphate synthase subunit JBrowse link 5 152,200,681 152,227,669 RGD:8554872
G Dhx38 DEAH-box helicase 38 JBrowse link 19 42,110,291 42,127,540 RGD:11554173
G Edn1 endothelin 1 JBrowse link 17 22,136,814 22,143,745 RGD:8661800
G Fam161a FAM161 centrosomal protein A JBrowse link 14 107,785,029 107,803,765 RGD:8554872
G Fgfr2 fibroblast growth factor receptor 2 JBrowse link 1 200,590,951 200,696,946 RGD:12801430
G Fscn2 fascin actin-bundling protein 2, retinal JBrowse link 10 109,528,307 109,540,675 RGD:1598962
G Fth1 ferritin heavy chain 1 JBrowse link 1 226,030,940 226,033,228 RGD:8554872
G Gphn gephyrin JBrowse link 6 101,327,874 101,859,169 RGD:8554872
G Grin2b glutamate ionotropic receptor NMDA type subunit 2B JBrowse link 4 169,541,620 170,000,216 RGD:13432034
G Guca1a guanylate cyclase activator 1A JBrowse link 9 15,609,804 15,620,030 RGD:8554872
G Guca1b guanylate cyclase activator 1B JBrowse link 9 15,621,083 15,629,017 RGD:8547535
RGD:8554872
RGD:11554173
G Gucy2d guanylate cyclase 2D, retinal JBrowse link 10 55,835,695 55,851,235 RGD:1599624
RGD:8554872
RGD:11554173
G Hgf hepatocyte growth factor JBrowse link 4 15,435,460 15,505,377 RGD:8548602
G Hk1 hexokinase 1 JBrowse link 20 31,911,460 31,979,780 RGD:13673896
G Idh3b isocitrate dehydrogenase (NAD(+)) 3 beta JBrowse link 3 122,808,564 122,813,638 RGD:11554173
RGD:8554872
G Ift140 intraflagellar transport 140 JBrowse link 10 14,373,668 14,461,509 RGD:8554872
G Impdh1 inosine monophosphate dehydrogenase 1 JBrowse link 4 56,478,383 56,493,987 RGD:1599608
RGD:8554872
RGD:11554173
RGD:5144221
RGD:5144134
G Impg2 interphotoreceptor matrix proteoglycan 2 JBrowse link 11 46,615,091 46,693,565 RGD:8554872
G Itga4 integrin subunit alpha 4 JBrowse link 3 66,178,745 66,265,547 RGD:8554872
G Itprid2 ITPR interacting domain containing 2 JBrowse link 3 66,593,767 66,631,143 RGD:8554872
G Kl Klotho JBrowse link 12 942,974 987,206 RGD:10403060
G Klb klotho beta JBrowse link 14 44,529,523 44,614,093 RGD:10403060
G Klhl7 kelch-like family member 7 JBrowse link 4 7,532,881 7,582,032 RGD:8554872
G Lrat lecithin retinol acyltransferase JBrowse link 2 181,896,304 181,905,366 RGD:1599754
RGD:11554173
RGD:8554872
RGD:8547535
G Mak male germ cell-associated kinase JBrowse link 17 21,531,651 21,567,742 RGD:8554872
G Mall mal, T-cell differentiation protein-like JBrowse link 3 120,272,583 120,307,090 RGD:8554872
G Mertk MER proto-oncogene, tyrosine kinase JBrowse link 3 121,235,230 121,340,932 RGD:8554872
RGD:11554173
G Mfrp membrane frizzled-related protein JBrowse link 8 48,437,720 48,443,421 RGD:11553921
G Mfsd8 major facilitator superfamily domain containing 8 JBrowse link 2 127,706,618 127,784,129 RGD:8554872
G MGC94199 similar to RIKEN cDNA 2610301B20; EST AI428449 JBrowse link 5
5
24,145,829
23,358,464
24,165,467
23,377,697
RGD:8554872
RGD:11554173
G Mir103a2 microRNA 103a-2 JBrowse link 3 123,833,671 123,833,756 RGD:8554872
G Mt2A metallothionein 2A JBrowse link 19 11,307,966 11,308,740 RGD:6483819
G Mtln mitoregulin JBrowse link 3 120,372,665 120,373,523 RGD:8554872
G Myo7a myosin VIIA JBrowse link 1 163,001,313 163,071,545 RGD:8547536
RGD:8554872
G Neurod1 neuronal differentiation 1 JBrowse link 3 66,414,314 66,417,617 RGD:8554872
G Ngf nerve growth factor JBrowse link 2 204,886,158 204,939,523 RGD:4891133
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 JBrowse link 5 166,409,460 166,430,291 RGD:8554872
G Nphp1 nephrocystin 1 JBrowse link 3 120,316,048 120,370,089 RGD:8554872
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 JBrowse link 8 64,797,518 64,801,587 RGD:8554872
G Nrl neural retina leucine zipper JBrowse link 15 34,197,115 34,201,408 RGD:1580991
RGD:11554173
RGD:8554872
G Ofd1 OFD1, centriole and centriolar satellite protein JBrowse link X 29,562,165 29,602,934 RGD:11535961
G Pank2 pantothenate kinase 2 JBrowse link 3 123,807,911 123,841,797 RGD:8554872
G Pcare photoreceptor cilium actin regulator JBrowse link 6 23,337,507 23,346,232 RGD:8554872
G Pcdh15 protocadherin related 15 JBrowse link 20 14,952,213 15,334,745 RGD:8547536
G Pde6a phosphodiesterase 6A JBrowse link 18 56,544,652 56,617,480 RGD:8547535
RGD:8554872
RGD:11554173
G Pde6b phosphodiesterase 6B JBrowse link 14 2,328,690 2,371,913 RGD:8657407
RGD:8554872
RGD:11554173
G Pde6c phosphodiesterase 6C JBrowse link 1 256,822,099 256,885,879 RGD:8554872
G Pde6g phosphodiesterase 6G JBrowse link 10 109,620,499 109,625,214 RGD:8547535
RGD:11554173
RGD:8554872
G Phyh phytanoyl-CoA 2-hydroxylase JBrowse link 17 77,287,580 77,304,482 RGD:8554872
G Pitpnm3 PITPNM family member 3 JBrowse link 10 58,618,679 58,722,679 RGD:8554872
G Poc5 POC5 centriolar protein JBrowse link 2 27,000,303 27,030,646 RGD:8554872
G Prcd photoreceptor disc component JBrowse link 10 105,630,686 105,642,427 RGD:8554872
G Prkcg protein kinase C, gamma JBrowse link 1 64,407,098 64,433,698 RGD:737791
G Prom1 prominin 1 JBrowse link 14 71,532,321 71,637,400 RGD:8554872
G Prpf3 pre-mRNA processing factor 3 JBrowse link 2 197,947,010 197,971,464 RGD:1599535
RGD:8554872
G Prpf31 pre-mRNA processing factor 31 JBrowse link 1 64,150,786 64,162,461 RGD:8547535
RGD:8554872
G Prpf6 pre-mRNA processing factor 6 JBrowse link 3 177,098,137 177,162,937 RGD:8554872
G Prpf8 pre-mRNA processing factor 8 JBrowse link 10 63,635,239 63,658,360 RGD:1599210
RGD:8554872
RGD:8547535
G Prph2 peripherin 2 JBrowse link 9 16,085,933 16,386,176 RGD:8547535
RGD:8554872
RGD:8554861
RGD:8554860
RGD:8553237
RGD:8553235
RGD:8553234
RGD:8553222
RGD:8553218
RGD:8553216
RGD:8553188
G Prps1 phosphoribosyl pyrophosphate synthetase 1 JBrowse link X 111,798,233 111,820,270 RGD:11056008
G Pten phosphatase and tensin homolog JBrowse link 1 251,421,814 251,487,634 RGD:12802340
G Rbp3 retinol binding protein 3 JBrowse link 16 10,277,775 10,286,243 RGD:8547535
RGD:8554872
RGD:11554173
G Rcbtb1 RCC1 and BTB domain containing protein 1 JBrowse link 15 39,622,572 39,665,335 RGD:8554872
G Rdh12 retinol dehydrogenase 12 JBrowse link 6 102,392,828 102,405,750 RGD:8547535
RGD:8554872
RGD:11554173
G RGD1306271 similar to KIAA1549 protein JBrowse link 4 65,834,933 65,962,722 RGD:8554872
G Rgr retinal G protein coupled receptor JBrowse link 16 14,286,323 14,300,972 RGD:1599623
RGD:8554872
RGD:11554173
G Rho rhodopsin JBrowse link 4 147,832,136 147,837,298 RGD:1601619
RGD:8554872
RGD:11554173
RGD:8548552
RGD:8548543
RGD:8548518
RGD:8548516
RGD:8548515
RGD:8548514
RGD:8548513
RGD:8548512
RGD:8548491
RGD:8548490
RGD:8547992
RGD:8547991
RGD:8547535
G Rims1 regulating synaptic membrane exocytosis 1 JBrowse link 9 28,440,408 28,973,246 RGD:8554872
G Ripk1 receptor interacting serine/threonine kinase 1 JBrowse link 17 31,537,580 31,569,904 RGD:7777166
G Ripk3 receptor-interacting serine-threonine kinase 3 JBrowse link 15 34,470,796 34,479,741 RGD:7777166
G Rlbp1 retinaldehyde binding protein 1 JBrowse link 1 141,097,789 141,111,375 RGD:1599618
RGD:8554872
RGD:8547535
G Rom1 retinal outer segment membrane protein 1 JBrowse link 1 225,126,732 225,128,740 RGD:8554872
RGD:11554173
G Rp1 RP1, axonemal microtubule associated JBrowse link 5 15,005,028 15,060,508 RGD:8547535
RGD:8554872
G Rp1l1 RP1 like 1 JBrowse link 15 47,344,380 47,384,461 RGD:8554872
G Rp2 RP2 activator of ARL3 GTPase JBrowse link X 2,066,298 2,116,661 RGD:1599605
RGD:8554872
G Rp9 RP9, pre-mRNA splicing factor JBrowse link 8 23,450,111 23,482,939 RGD:8554872
G Rpe65 retinoid isomerohydrolase RPE65 JBrowse link 2 266,141,581 266,169,197 RGD:8547535
RGD:8554872
RGD:11554173
RGD:9585650
RGD:9585645
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 14,271,012 14,331,745 RGD:1599602
RGD:8554872
RGD:11554173
RGD:8547535
RGD:1599600
RGD:1599605
G Rpgrip1 RPGR interacting protein 1 JBrowse link 15 28,521,287 28,575,046 RGD:1599581
RGD:8554872
RGD:11554173
G Sag S-antigen visual arrestin JBrowse link 9 94,926,901 94,972,162 RGD:8547535
RGD:8554872
RGD:11554173
G Scaper S-phase cyclin A-associated protein in the ER JBrowse link 8 60,127,039 60,593,568 RGD:8554872
G Sema4a semaphorin 4A JBrowse link 2 187,799,568 187,823,014 RGD:8554872
G Serpinf1 serpin family F member 1 JBrowse link 10 62,241,750 62,254,145 RGD:8554900
G Slc19a1 solute carrier family 19 member 1 JBrowse link 20 12,334,675 12,354,517 RGD:8554872
G Slc24a1 solute carrier family 24 member 1 JBrowse link 8 70,409,683 70,438,352 RGD:8554872
G Slc6a6 solute carrier family 6 member 6 JBrowse link 4 123,638,619 123,713,469 RGD:13592920
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 JBrowse link 3 119,640,324 119,669,651 RGD:8554872
RGD:10448280
RGD:10448279
G Snx17 sorting nexin 17 JBrowse link 6 26,541,137 26,546,650 RGD:8554872
G Sod1 superoxide dismutase 1 JBrowse link 11 30,363,282 30,368,858 RGD:8655617
RGD:8158049
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:8158049
G Spata7 spermatogenesis associated 7 JBrowse link 6 122,603,248 122,648,718 RGD:11554173
RGD:8554872
G Tfpt TCF3 fusion partner JBrowse link 1 64,162,525 64,172,307 RGD:8554872
G Topors TOP1 binding arginine/serine rich protein JBrowse link 5 56,554,956 56,566,503 RGD:8554872
G Ttc8 tetratricopeptide repeat domain 8 JBrowse link 6 122,920,308 122,974,525 RGD:8554872
G Ttll5 tubulin tyrosine ligase like 5 JBrowse link 6 109,693,915 109,910,479 RGD:8554872
G Ttpa alpha tocopherol transfer protein JBrowse link 5 34,007,926 34,029,315 RGD:11554173
G Tulp1 tubby like protein 1 JBrowse link 20 7,931,673 7,943,601 RGD:1624352
RGD:8554872
RGD:8547535
G Unc119 unc-119 lipid binding chaperone JBrowse link 10 65,606,919 65,612,324 RGD:8554872
RGD:11554173
G Ush1c USH1 protein network component harmonin JBrowse link 1 102,207,096 102,256,779 RGD:8547536
G Ush1g USH1 protein network component sans JBrowse link 10 103,866,566 103,873,416 RGD:8547536
G Ush2a usherin JBrowse link 13 106,750,738 107,434,195 RGD:8547535
RGD:8554872
RGD:11554173
RGD:8547967
RGD:8547966
RGD:8547963
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:7483592
G Vsx2 visual system homeobox 2 JBrowse link 6 108,285,031 108,308,588 RGD:8554872
G Wdr19 WD repeat domain 19 JBrowse link 14 44,705,012 44,767,120 RGD:11552600
G Zdhhc24 zinc finger, DHHC-type containing 24 JBrowse link 1 220,137,280 220,143,387 RGD:8554872
G Zfp513 zinc finger protein 513 JBrowse link 6 26,537,707 26,541,051 RGD:8554872
G Zfyve26 zinc finger FYVE-type containing 26 JBrowse link 6 102,409,235 102,472,962 RGD:8554872
retinitis pigmentosa 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rp1 RP1, axonemal microtubule associated JBrowse link 5 15,005,028 15,060,508 RGD:7240710
RGD:8554872
retinitis pigmentosa 10 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Impdh1 inosine monophosphate dehydrogenase 1 JBrowse link 4 56,478,383 56,493,987 RGD:7240710
RGD:8554872
retinitis pigmentosa 11 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prpf31 pre-mRNA processing factor 31 JBrowse link 1 64,150,786 64,162,461 RGD:7240710
RGD:8554872
retinitis pigmentosa 12 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crb1 crumbs cell polarity complex component 1 JBrowse link 13 56,270,519 56,462,893 RGD:7240710
RGD:8554872
retinitis pigmentosa 13 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prpf8 pre-mRNA processing factor 8 JBrowse link 10 63,635,239 63,658,360 RGD:7240710
RGD:8554872
retinitis pigmentosa 14 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tulp1 tubby like protein 1 JBrowse link 20 7,931,673 7,943,601 RGD:7240710
RGD:8554872
retinitis pigmentosa 17 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ca4 carbonic anhydrase 4 JBrowse link 10 72,272,286 72,281,069 RGD:7240710
RGD:8554872
retinitis pigmentosa 18 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prpf3 pre-mRNA processing factor 3 JBrowse link 2 197,947,010 197,971,464 RGD:8554872
RGD:7240710
retinitis pigmentosa 19 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca4 ATP binding cassette subfamily A member 4 JBrowse link 2 225,645,539 225,783,288 RGD:7240710
RGD:8554872
retinitis pigmentosa 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arl3 ADP ribosylation factor like GTPase 3 JBrowse link 1 266,287,015 266,333,099 RGD:13592920
G Rp2 RP2 activator of ARL3 GTPase JBrowse link X 2,066,298 2,116,661 RGD:7240710
RGD:8554872
retinitis pigmentosa 20 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpe65 retinoid isomerohydrolase RPE65 JBrowse link 2 266,141,581 266,169,197 RGD:8554872
RGD:7240710
retinitis pigmentosa 23 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ofd1 OFD1, centriole and centriolar satellite protein JBrowse link X 29,562,165 29,602,934 RGD:8554872
RGD:7240710
retinitis pigmentosa 26 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brca2 BRCA2, DNA repair associated JBrowse link 12 503,660 544,754 RGD:8554872
G Cerkl ceramide kinase-like JBrowse link 3 66,268,835 66,395,615 RGD:7240710
RGD:8554872
G Itga4 integrin subunit alpha 4 JBrowse link 3 66,178,745 66,265,547 RGD:8554872
G Myh7 myosin heavy chain 7 JBrowse link 15 33,605,769 33,657,761 RGD:8554872
G Spg7 SPG7 matrix AAA peptidase subunit, paraplegin JBrowse link 19 55,880,549 55,914,729 RGD:8554872
retinitis pigmentosa 27 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nrl neural retina leucine zipper JBrowse link 15 34,197,115 34,201,408 RGD:7240710
RGD:8554872
retinitis pigmentosa 28 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fam161a FAM161 centrosomal protein A JBrowse link 14 107,785,029 107,803,765 RGD:8554872
RGD:7240710
retinitis pigmentosa 3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Iqcb1 IQ motif containing B1 JBrowse link 11 66,824,059 66,878,585 RGD:11352374
RGD:11537386
G Rp2 RP2 activator of ARL3 GTPase JBrowse link X 2,066,298 2,116,661 RGD:8554872
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 14,271,012 14,331,745 RGD:7240710
RGD:8554872
RGD:8553233
RGD:8553228
RGD:8553210
RGD:8553208
RGD:8553206
RGD:8553204
RGD:8553202
RGD:8553198
RGD:8553196
RGD:8553229
G Rpgrip1l Rpgrip1-like JBrowse link 19 17,115,266 17,208,055 RGD:11352374
retinitis pigmentosa 30 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fscn2 fascin actin-bundling protein 2, retinal JBrowse link 10 109,528,307 109,540,675 RGD:7240710
RGD:8554872
retinitis pigmentosa 31 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Topors TOP1 binding arginine/serine rich protein JBrowse link 5 56,554,956 56,566,503 RGD:7240710
RGD:8554872
retinitis pigmentosa 33 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 JBrowse link 3 119,640,324 119,669,651 RGD:7240710
RGD:8554872
retinitis pigmentosa 35 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sema4a semaphorin 4A JBrowse link 2 187,799,568 187,823,014 RGD:7240710
RGD:8554872
retinitis pigmentosa 36 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cygb cytoglobin JBrowse link 10 105,618,325 105,628,091 RGD:8554872
G Prcd photoreceptor disc component JBrowse link 10 105,630,686 105,642,427 RGD:7240710
RGD:8554872
retinitis pigmentosa 37 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nr2e3 nuclear receptor subfamily 2, group E, member 3 JBrowse link 8 64,797,518 64,801,587 RGD:7240710
RGD:8554872
retinitis pigmentosa 38 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mertk MER proto-oncogene, tyrosine kinase JBrowse link 3 121,235,230 121,340,932 RGD:7240710
RGD:8554872
retinitis pigmentosa 39 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ush2a usherin JBrowse link 13 106,750,738 107,434,195 RGD:7240710
RGD:8554872
retinitis pigmentosa 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rho rhodopsin JBrowse link 4 147,832,136 147,837,298 RGD:7240710
RGD:8554872
retinitis pigmentosa 40 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pde6b phosphodiesterase 6B JBrowse link 14 2,328,690 2,371,913 RGD:7240710
RGD:8554872
retinitis pigmentosa 41 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prom1 prominin 1 JBrowse link 14 71,532,321 71,637,400 RGD:7240710
RGD:8554872
retinitis pigmentosa 42 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Klhl7 kelch-like family member 7 JBrowse link 4 7,532,881 7,582,032 RGD:7240710
RGD:8554872
retinitis pigmentosa 43 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pde6a phosphodiesterase 6A JBrowse link 18 56,544,652 56,617,480 RGD:7240710
RGD:8554872
retinitis pigmentosa 44 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rgr retinal G protein coupled receptor JBrowse link 16 14,286,323 14,300,972 RGD:7240710
RGD:8554872
retinitis pigmentosa 45 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cngb1 cyclic nucleotide gated channel beta 1 JBrowse link 19 10,142,440 10,206,618 RGD:7240710
RGD:8554872
retinitis pigmentosa 46 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Idh3b isocitrate dehydrogenase (NAD(+)) 3 beta JBrowse link 3 122,808,564 122,813,638 RGD:7240710
RGD:8554872
retinitis pigmentosa 47 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sag S-antigen visual arrestin JBrowse link 9 94,926,901 94,972,162 RGD:7240710
RGD:8554872
retinitis pigmentosa 48 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Guca1b guanylate cyclase activator 1B JBrowse link 9 15,621,083 15,629,017 RGD:7240710
RGD:8554872
retinitis pigmentosa 49 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cnga1 cyclic nucleotide gated channel alpha 1 JBrowse link 14 38,155,771 38,171,107 RGD:7240710
RGD:8554872
G Cngb1 cyclic nucleotide gated channel beta 1 JBrowse link 19 10,142,440 10,206,618 RGD:8554872
G Col1a2 collagen type I alpha 2 chain JBrowse link 4 31,534,225 31,569,152 RGD:8554872
G Nr5a1 nuclear receptor subfamily 5, group A, member 1 JBrowse link 3 22,998,900 23,020,441 RGD:8554872
G Spg7 SPG7 matrix AAA peptidase subunit, paraplegin JBrowse link 19 55,880,549 55,914,729 RGD:8554872
retinitis pigmentosa 50 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Best1 bestrophin 1 JBrowse link 1 226,033,146 226,049,893 RGD:7240710
RGD:8554872
retinitis pigmentosa 51 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ttc8 tetratricopeptide repeat domain 8 JBrowse link 6 122,920,308 122,974,525 RGD:7240710
RGD:8554872
retinitis pigmentosa 54 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pcare photoreceptor cilium actin regulator JBrowse link 6 23,337,507 23,346,232 RGD:7240710
RGD:8554872
retinitis pigmentosa 55 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arl6 ADP-ribosylation factor like GTPase 6 JBrowse link 11 42,858,476 42,884,324 RGD:7240710
RGD:8554872
retinitis pigmentosa 56 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Impg2 interphotoreceptor matrix proteoglycan 2 JBrowse link 11 46,615,091 46,693,565 RGD:7240710
RGD:8554872
retinitis pigmentosa 57 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pde6g phosphodiesterase 6G JBrowse link 10 109,620,499 109,625,214 RGD:7240710
RGD:8554872
retinitis pigmentosa 58 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Zfp513 zinc finger protein 513 JBrowse link 6 26,537,707 26,541,051 RGD:7240710
RGD:8554872
retinitis pigmentosa 59 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhdds dehydrodolichyl diphosphate synthase subunit JBrowse link 5 152,200,681 152,227,669 RGD:7240710
RGD:8554872
retinitis pigmentosa 60 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prpf6 pre-mRNA processing factor 6 JBrowse link 3 177,098,137 177,162,937 RGD:7240710
RGD:8554872
retinitis pigmentosa 61 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clrn1 clarin 1 JBrowse link 2 149,049,925 149,088,787 RGD:7240710
RGD:8554872
retinitis pigmentosa 62 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mak male germ cell-associated kinase JBrowse link 17 21,531,651 21,567,742 RGD:7240710
RGD:8554872
retinitis pigmentosa 66 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rbp3 retinol binding protein 3 JBrowse link 16 10,277,775 10,286,243 RGD:7240710
RGD:8554872
retinitis pigmentosa 67 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nek2 NIMA-related kinase 2 JBrowse link 13 110,511,546 110,524,750 RGD:7240710
retinitis pigmentosa 68 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc7a14 solute carrier family 7, member 14 JBrowse link 2 115,678,344 115,788,688 RGD:7240710
RGD:8554872
retinitis pigmentosa 69 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kiz kizuna centrosomal protein JBrowse link 3 141,067,981 141,173,738 RGD:8554872
RGD:7240710
retinitis pigmentosa 7 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prph2 peripherin 2 JBrowse link 9 16,085,933 16,386,176 RGD:7240710
RGD:8554872
G Rom1 retinal outer segment membrane protein 1 JBrowse link 1 225,126,732 225,128,740 RGD:7240710
Retinitis Pigmentosa 7 with Bull'S-Eye Maculopathy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prph2 peripherin 2 JBrowse link 9 16,085,933 16,386,176 RGD:8554872
Retinitis Pigmentosa 7, Digenic term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prph2 peripherin 2 JBrowse link 9 16,085,933 16,386,176 RGD:8554872
G Rom1 retinal outer segment membrane protein 1 JBrowse link 1 225,126,732 225,128,740 RGD:8554872
retinitis pigmentosa 70 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prpf4 pre-mRNA processing factor 4 JBrowse link 5 78,267,248 78,281,172 RGD:8554872
RGD:7240710
retinitis pigmentosa 71 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ift172 intraflagellar transport 172 JBrowse link 6 26,390,686 26,485,459 RGD:8554872
RGD:7240710
G Krtcap3 keratinocyte associated protein 3 JBrowse link 6 26,485,126 26,486,695 RGD:8554872
retinitis pigmentosa 72 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Znf408 zinc finger protein 408 JBrowse link 3 80,549,102 80,555,186 RGD:8554872
RGD:7240710
retinitis pigmentosa 73 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hgsnat heparan-alpha-glucosaminide N-acetyltransferase JBrowse link 16 70,876,557 70,909,443 RGD:7240710
RGD:8554872
G Pomk protein-O-mannose kinase JBrowse link 16 70,854,825 70,869,653 RGD:8554872
retinitis pigmentosa 74 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bbs2 Bardet-Biedl syndrome 2 JBrowse link 19 11,385,921 11,421,523 RGD:7240710
RGD:8554872
retinitis pigmentosa 75 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Agbl5 ATP/GTP binding protein-like 5 JBrowse link 6 26,837,299 26,857,234 RGD:8554872
RGD:7240710
Retinitis Pigmentosa 76 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) JBrowse link 5 135,007,343 135,017,220 RGD:8554872
RGD:7240710
G Tspan1 tetraspanin 1 JBrowse link 5 135,019,206 135,032,412 RGD:8554872
retinitis pigmentosa 77 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Reep6 receptor accessory protein 6 JBrowse link 7 12,240,059 12,246,814 RGD:8554872
RGD:7240710
Retinitis Pigmentosa 78 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arhgef18 Rho/Rac guanine nucleotide exchange factor 18 JBrowse link 12 1,889,252 1,998,128 RGD:8554872
RGD:7240710
Retinitis Pigmentosa 79 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hk1 hexokinase 1 JBrowse link 20 31,911,460 31,979,780 RGD:8554872
RGD:7240710
Retinitis Pigmentosa 80 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ift140 intraflagellar transport 140 JBrowse link 10 14,373,668 14,461,509 RGD:8554872
RGD:7240710
retinitis pigmentosa 81 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ift43 intraflagellar transport 43 JBrowse link 6 109,939,323 110,016,646 RGD:8554872
RGD:7240710
Retinitis Pigmentosa 83 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arl3 ADP ribosylation factor like GTPase 3 JBrowse link 1 266,287,015 266,333,099 RGD:7240710
RGD:8554872
Retinitis Pigmentosa 84 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dhx38 DEAH-box helicase 38 JBrowse link 19 42,110,291 42,127,540 RGD:7240710
RGD:8554872
Retinitis Pigmentosa 85 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahr aryl hydrocarbon receptor JBrowse link 6 54,963,990 55,001,806 RGD:7240710
retinitis pigmentosa 9 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rp9 RP9, pre-mRNA splicing factor JBrowse link 8 23,450,111 23,482,939 RGD:7240710
RGD:8554872
RETINITIS PIGMENTOSA AND ERYTHROCYTIC MICROCYTOSIS term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trnt1 tRNA nucleotidyl transferase 1 JBrowse link 4 138,855,497 138,869,217 RGD:8554872
RGD:7240710
retinitis pigmentosa with or without situs inversus term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arl2bp ADP-ribosylation factor like GTPase 2 binding protein JBrowse link 19 10,753,670 10,763,247 RGD:7240710
RGD:8554872
Retinitis Pigmentosa, Late-Onset Dominant term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prph2 peripherin 2 JBrowse link 9 16,085,933 16,386,176 RGD:8553240
retinitis pigmentosa-deafness syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgrv1 adhesion G protein-coupled receptor V1 JBrowse link 2 8,926,843 9,504,455 RGD:8554872
G Cdh23 cadherin-related 23 JBrowse link 20 29,857,018 30,263,758 RGD:8554872
G Clrn1 clarin 1 JBrowse link 2 149,049,925 149,088,787 RGD:8554872
G Hars histidyl-tRNA synthetase JBrowse link 18 29,611,545 29,629,087 RGD:8554872
G Hars2 histidyl-tRNA synthetase 2, mitochondrial JBrowse link 18 29,629,203 29,638,460 RGD:8554872
G LOC100361018 rCG22048-like JBrowse link 20 29,947,427 29,954,869 RGD:8554872
G Myo7a myosin VIIA JBrowse link 1 163,001,313 163,071,545 RGD:8554872
G Otop2 otopetrin 2 JBrowse link 10 103,874,383 103,883,953 RGD:8554872
G Pcdh15 protocadherin related 15 JBrowse link 20 14,952,213 15,334,745 RGD:8554872
G Psap prosaposin JBrowse link 20 29,831,302 29,856,876 RGD:8554872
G Ush1c USH1 protein network component harmonin JBrowse link 1 102,207,096 102,256,779 RGD:8554872
G Ush1g USH1 protein network component sans JBrowse link 10 103,866,566 103,873,416 RGD:8554872
G Ush2a usherin JBrowse link 13 106,750,738 107,434,195 RGD:8554872
G Whrn whirlin JBrowse link 5 79,235,541 79,317,206 RGD:8554872
RHYNS Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tmem67 transmembrane protein 67 JBrowse link 5 25,666,138 25,721,056 RGD:8554872
Senior-Loken Syndrome 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nphp4 nephrocystin 4 JBrowse link 5 169,647,581 169,744,662 RGD:7240710
RGD:8554872
SHORT STATURE, HEARING LOSS, RETINITIS PIGMENTOSA, AND DISTINCTIVE FACIES term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Exosc2 exosome component 2 JBrowse link 3 10,151,734 10,161,997 RGD:8554872
RGD:7240710
short-rib thoracic dysplasia 9 with or without polydactyly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ift140 intraflagellar transport 140 JBrowse link 10 14,373,668 14,461,509 RGD:7240710
RGD:8554872
Sorsby's fundus dystrophy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Syn3 synapsin III JBrowse link 7 23,403,896 23,808,602 RGD:8554872
G Timp3 TIMP metallopeptidase inhibitor 3 JBrowse link 7 23,543,125 23,594,170 RGD:7240710
RGD:8554872
Spondylometaphyseal Dysplasia with Cone-Rod Dystrophy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pcyt1a phosphate cytidylyltransferase 1, choline, alpha JBrowse link 11 71,547,865 71,592,037 RGD:7240710
RGD:8554872
Usher syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgrv1 adhesion G protein-coupled receptor V1 JBrowse link 2 8,926,843 9,504,455 RGD:8554872
G Bpnt1 3'(2'), 5'-bisphosphate nucleotidase 1 JBrowse link 13 103,268,045 103,292,848 RGD:8554872
G Cdh23 cadherin-related 23 JBrowse link 20 29,857,018 30,263,758 RGD:8547536
RGD:8554872
G Clrn1 clarin 1 JBrowse link 2 149,049,925 149,088,787 RGD:8547535
G Dusp10 dual specificity phosphatase 10 JBrowse link 13 104,284,660 104,321,455 RGD:8554872
G Eprs glutamyl-prolyl-tRNA synthetase JBrowse link 13 103,300,911 103,371,651 RGD:8554872
G Esrrg estrogen-related receptor gamma JBrowse link 13 106,063,799 106,683,353 RGD:8554872
G Gpatch2 G patch domain containing 2 JBrowse link 13 105,684,300 105,824,405 RGD:8554872
G Hhipl2 HHIP like 2 JBrowse link 13 101,814,574 101,835,144 RGD:8554872
G Hlx H2.0-like homeobox JBrowse link 13 102,637,967 102,643,376 RGD:8554872
G Iars2 isoleucyl-tRNA synthetase 2, mitochondrial JBrowse link 13 103,229,868 103,265,019 RGD:8554872
G Lyplal1 lysophospholipase-like 1 JBrowse link 13 104,049,263 104,080,680 RGD:8554872
G Marc1 mitochondrial amidoxime reducing component 1 JBrowse link 13 102,693,679 102,724,120 RGD:8554872
G Marc2 mitochondrial amidoxime reducing component 2 JBrowse link 13 102,724,266 102,755,511 RGD:8554872
G Mark1 microtubule affinity regulating kinase 1 JBrowse link 13 102,808,254 102,942,863 RGD:8554872
G Mir194-1 microRNA 194-1 JBrowse link 13 103,250,576 103,250,658 RGD:8554872
G Myo7a myosin VIIA JBrowse link 1 163,001,313 163,071,545 RGD:8547536
RGD:8554872
RGD:11554173
G Pcdh15 protocadherin related 15 JBrowse link 20 14,952,213 15,334,745 RGD:8547536
RGD:8554872
RGD:11554173
G Prom1 prominin 1 JBrowse link 14 71,532,321 71,637,400 RGD:8554872
G Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 JBrowse link 13 103,157,806 103,229,010 RGD:8554872
G RGD1310587 similar to hypothetical protein FLJ14146 JBrowse link 13 102,780,885 102,790,621 RGD:8554872
G Rrp15 ribosomal RNA processing 15 homolog JBrowse link 13 105,155,824 105,178,907 RGD:8554872
G Slc30a10 solute carrier family 30, member 10 JBrowse link 13 103,396,295 103,406,759 RGD:8554872
G Spata17 spermatogenesis associated 17 JBrowse link 13 105,489,121 105,684,293 RGD:8554872
G Taf1a TATA-box binding protein associated factor, RNA polymerase I subunit A JBrowse link 13 101,770,278 101,807,975 RGD:8554872
G Tgfb2 transforming growth factor, beta 2 JBrowse link 13 105,039,639 105,142,010 RGD:8554872
G Ush1c USH1 protein network component harmonin JBrowse link 1 102,207,096 102,256,779 RGD:8547536
RGD:8554872
RGD:8695937
RGD:8695939
RGD:8694458
RGD:8694457
G Ush1g USH1 protein network component sans JBrowse link 10 103,866,566 103,873,416 RGD:8547536
G Ush2a usherin JBrowse link 13 106,750,738 107,434,195 RGD:8547535
RGD:8554872
RGD:8547956
Usher syndrome type 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgrv1 adhesion G protein-coupled receptor V1 JBrowse link 2 8,926,843 9,504,455 RGD:8554872
G Cdh23 cadherin-related 23 JBrowse link 20 29,857,018 30,263,758 RGD:8554872
G Cib2 calcium and integrin binding family member 2 JBrowse link 8 59,123,078 59,139,946 RGD:8554872
G Espn espin JBrowse link 5 169,293,356 169,331,338 RGD:8554872
G LOC100361018 rCG22048-like JBrowse link 20 29,947,427 29,954,869 RGD:8554872
G Myo7a myosin VIIA JBrowse link 1 163,001,313 163,071,545 RGD:8694152
RGD:8554872
RGD:13592920
G Otop2 otopetrin 2 JBrowse link 10 103,874,383 103,883,953 RGD:8554872
G Pcdh15 protocadherin related 15 JBrowse link 20 14,952,213 15,334,745 RGD:8554872
G Prdm16 PR/SET domain 16 JBrowse link 5 171,662,277 171,711,561 RGD:8554872
G Ush1c USH1 protein network component harmonin JBrowse link 1 102,207,096 102,256,779 RGD:8695918
RGD:8554872
RGD:13592920
RGD:8695921
RGD:8695919
G Ush1g USH1 protein network component sans JBrowse link 10 103,866,566 103,873,416 RGD:8554872
G Ush2a usherin JBrowse link 13 106,750,738 107,434,195 RGD:8554872
Usher Syndrome Type 1B term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Myo7a myosin VIIA JBrowse link 1 163,001,313 163,071,545 RGD:7240710
RGD:8554872
RGD:1581470
RGD:8694151
RGD:8694137
RGD:8694135
G Ush1c USH1 protein network component harmonin JBrowse link 1 102,207,096 102,256,779 RGD:11554173
Usher syndrome type 1C term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ush1c USH1 protein network component harmonin JBrowse link 1 102,207,096 102,256,779 RGD:7240710
RGD:8554872
RGD:11554173
RGD:1600453
Usher syndrome type 1D term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdh23 cadherin-related 23 JBrowse link 20 29,857,018 30,263,758 RGD:7240710
RGD:8554872
RGD:8662279
G LOC100361018 rCG22048-like JBrowse link 20 29,947,427 29,954,869 RGD:8554872
G Pcdh15 protocadherin related 15 JBrowse link 20 14,952,213 15,334,745 RGD:7240710
RGD:8554872
G Psap prosaposin JBrowse link 20 29,831,302 29,856,876 RGD:8554872
Usher syndrome type 1F term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pcdh15 protocadherin related 15 JBrowse link 20 14,952,213 15,334,745 RGD:7240710
RGD:8554872
Usher syndrome type 1G term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Otop2 otopetrin 2 JBrowse link 10 103,874,383 103,883,953 RGD:8554872
G Pcdh15 protocadherin related 15 JBrowse link 20 14,952,213 15,334,745 RGD:8554872
G Ush1g USH1 protein network component sans JBrowse link 10 103,866,566 103,873,416 RGD:7240710
RGD:8554872
Usher syndrome type 1J term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cib2 calcium and integrin binding family member 2 JBrowse link 8 59,123,078 59,139,946 RGD:7240710
RGD:11554173
RGD:8554872
Usher syndrome type 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ush2a usherin JBrowse link 13 106,750,738 107,434,195 RGD:8547952
RGD:8694137
RGD:8547985
RGD:8547965
RGD:8547962
Usher syndrome type 2A term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bnc2 basonuclin 2 JBrowse link 5 102,407,508 102,807,389 RGD:8554872
G Cep85l centrosomal protein 85-like JBrowse link 20 34,574,043 34,743,142 RGD:8554872
G Kctd3 potassium channel tetramerization domain containing 3 JBrowse link 13 107,433,588 107,471,843 RGD:8554872
G Pdzd7 PDZ domain containing 7 JBrowse link 1 264,776,393 264,796,206 RGD:7240710
RGD:8554872
G Pln phospholamban JBrowse link 20 34,633,157 34,642,904 RGD:8554872
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 JBrowse link 12 40,895,515 40,955,999 RGD:8554872
G Ush2a usherin JBrowse link 13 106,750,738 107,434,195 RGD:7240710
RGD:8554872
RGD:11554173
RGD:8547987
RGD:8547961
Usher syndrome type 2C term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adgrv1 adhesion G protein-coupled receptor V1 JBrowse link 2 8,926,843 9,504,455 RGD:7240710
RGD:8554872
G Pdzd7 PDZ domain containing 7 JBrowse link 1 264,776,393 264,796,206 RGD:7240710
RGD:8554872
G Slc4a7 solute carrier family 4 member 7 JBrowse link 15 11,832,611 11,912,923 RGD:13592920
Usher syndrome type 2D term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Whrn whirlin JBrowse link 5 79,235,541 79,317,206 RGD:7240710
RGD:8554872
Usher syndrome type 3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clrn1 clarin 1 JBrowse link 2 149,049,925 149,088,787 RGD:8554872
Usher syndrome type 3A term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Clrn1 clarin 1 JBrowse link 2 149,049,925 149,088,787 RGD:634439
RGD:8554872
RGD:7240710
Usher syndrome type 3B term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hars histidyl-tRNA synthetase JBrowse link 18 29,611,545 29,629,087 RGD:7240710
RGD:8554872
Usher Syndrome Type 4 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arsg arylsulfatase G JBrowse link 10 97,722,550 97,859,975 RGD:8554872
RGD:7240710
Usher Syndrome, Type ID/F term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cdh23 cadherin-related 23 JBrowse link 20 29,857,018 30,263,758 RGD:8554872
G Pcdh15 protocadherin related 15 JBrowse link 20 14,952,213 15,334,745 RGD:8554872
X-linked cone-rod dystrophy 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 14,271,012 14,331,745 RGD:8553225
RGD:8554872
RGD:7240710
RGD:8553232
RGD:8553227
X-linked cone-rod dystrophy 3 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cacna1f calcium voltage-gated channel subunit alpha1 F JBrowse link X 15,712,709 15,741,135 RGD:7240710
RGD:8554872
RGD:13782380
X-Linked Retinitis Pigmentosa, and Sinorespiratory Infections, with or without Deafness term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpgr retinitis pigmentosa GTPase regulator JBrowse link X 14,271,012 14,331,745 RGD:7240710
RGD:8554872

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14920
    sensory system disease 4265
      eye and adnexa disease 1995
        eye disease 1995
          fundus dystrophy 265
            Bothnia retinal dystrophy 1
            Chorioretinal Dystrophy, Spinocerebellar Ataxia, and Hypogonadotropic Hypogonadism 1
            Ghose Sachdev Kumar Syndrome 0
            RETINAL DYSTROPHY AND IRIS COLOBOMA WITH OR WITHOUT CONGENITAL CATARACT 2
            RETINAL DYSTROPHY WITH INNER RETINAL DYSFUNCTION AND GANGLION CELL ABNORMALITIES 1
            RETINAL DYSTROPHY WITH OR WITHOUT EXTRAOCULAR ANOMALIES 1
            RETINAL DYSTROPHY WITH OR WITHOUT MACULAR STAPHYLOMA 1
            Reticular Dystrophy of Retinal Pigment Epithelium 0
            Reticular Pigmentary Retinal Dystrophy of Posterior Pole 0
            Retinal Dystrophy and Obesity 2
            Retinal Dystrophy, Early Onset Severe 1
            Retinal Dystrophy, Iris Coloboma, and Comedogenic Acne Syndrome 1
            Retinal Dystrophy, Juvenile Cataracts, and Short Stature Syndrome 2
            cone-rod dystrophy + 48
            dominant pericentral pigmentary retinopathy 0
            dystrophies primarily involving the retinal pigment epithelium + 4
            fundus albipunctatus 5
            hereditary retinal dystrophy + 2
            retinal dystrophies primarily involving Bruch's membrane 0
            retinal dystrophy in systemic or cerebroretinal lipidoses 0
            retinitis pigmentosa + 237
            vitreoretinal dystrophy 0
Path 2
Term Annotations click to browse term
  disease 14920
    disease of anatomical entity 14086
      nervous system disease 9150
        sensory system disease 4265
          eye and adnexa disease 1995
            eye disease 1995
              retinal disease 724
                retinal degeneration 414
                  fundus dystrophy 265
                    Bothnia retinal dystrophy 1
                    Chorioretinal Dystrophy, Spinocerebellar Ataxia, and Hypogonadotropic Hypogonadism 1
                    Ghose Sachdev Kumar Syndrome 0
                    RETINAL DYSTROPHY AND IRIS COLOBOMA WITH OR WITHOUT CONGENITAL CATARACT 2
                    RETINAL DYSTROPHY WITH INNER RETINAL DYSFUNCTION AND GANGLION CELL ABNORMALITIES 1
                    RETINAL DYSTROPHY WITH OR WITHOUT EXTRAOCULAR ANOMALIES 1
                    RETINAL DYSTROPHY WITH OR WITHOUT MACULAR STAPHYLOMA 1
                    Reticular Dystrophy of Retinal Pigment Epithelium 0
                    Reticular Pigmentary Retinal Dystrophy of Posterior Pole 0
                    Retinal Dystrophy and Obesity 2
                    Retinal Dystrophy, Early Onset Severe 1
                    Retinal Dystrophy, Iris Coloboma, and Comedogenic Acne Syndrome 1
                    Retinal Dystrophy, Juvenile Cataracts, and Short Stature Syndrome 2
                    cone-rod dystrophy + 48
                    dominant pericentral pigmentary retinopathy 0
                    dystrophies primarily involving the retinal pigment epithelium + 4
                    fundus albipunctatus 5
                    hereditary retinal dystrophy + 2
                    retinal dystrophies primarily involving Bruch's membrane 0
                    retinal dystrophy in systemic or cerebroretinal lipidoses 0
                    retinitis pigmentosa + 237
                    vitreoretinal dystrophy 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.