ONTOLOGY REPORT - ANNOTATIONS


Term:Edema
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Accession:DOID:9000197 term browser browse the term
Definition:Abnormal fluid accumulation in TISSUES or body cavities. Most cases of edema are present under the SKIN in SUBCUTANEOUS TISSUE.
Synonyms:exact_synonym: Anasarca;   Dropsy;   Hydrops
 primary_id: MESH:D004487;   RDO:0003072
For additional species annotation, visit the Alliance of Genome Resources.


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Edema term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Amn amnion associated transmembrane protein JBrowse link 6 135,724,455 135,731,896 RGD:11554173
G Apoa1 apolipoprotein A1 JBrowse link 8 50,525,091 50,526,875 RGD:11554173
G Bdkrb1 bradykinin receptor B1 JBrowse link 6 129,437,423 129,441,553 RGD:628496
G Calca calcitonin-related polypeptide alpha JBrowse link 1 184,184,018 184,188,922 RGD:11554173
G Casp3 caspase 3 JBrowse link 16 48,845,011 48,863,249 RGD:11554173
G Casp8 caspase 8 JBrowse link 9 65,614,142 65,662,624 RGD:11554173
G Casp9 caspase 9 JBrowse link 5 160,356,211 160,373,774 RGD:11554173
G Cat catalase JBrowse link 3 93,379,872 93,412,058 RGD:11554173
G Col2a1 collagen type II alpha 1 chain JBrowse link 7 139,454,945 139,484,403 RGD:11554173
G Elane elastase, neutrophil expressed JBrowse link 7 12,638,320 12,640,168 RGD:10450565
G Gsr glutathione-disulfide reductase JBrowse link 16 62,197,617 62,239,987 RGD:11554173
G Il11 interleukin 11 JBrowse link 1 72,636,959 72,643,255 RGD:11554173
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:4889403
G Il1b interleukin 1 beta JBrowse link 3 121,876,256 121,882,637 RGD:7401193
G Il4 interleukin 4 JBrowse link 10 38,963,979 38,969,531 RGD:10402790
G Il6 interleukin 6 JBrowse link 4 3,043,231 3,047,807 RGD:2306981
RGD:11554173
G Ins2 insulin 2 JBrowse link 1 215,856,967 215,858,034 RGD:11554173
G Jak3 Janus kinase 3 JBrowse link 16 20,107,471 20,120,678 RGD:11533938
G Kng2 kininogen 2 JBrowse link 11 81,509,185 81,516,759 RGD:10450565
RGD:11554173
G Map2k6 mitogen-activated protein kinase kinase 6 JBrowse link 10 98,707,160 98,823,054 RGD:11554173
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:5509038
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 JBrowse link 18 31,728,373 32,704,022 RGD:4892316
G Oxt oxytocin/neurophysin I prepropeptide JBrowse link 3 123,106,694 123,107,534 RGD:11554173
G Pomc proopiomelanocortin JBrowse link 6 28,382,937 28,388,771 RGD:11554173
G Ptger3 prostaglandin E receptor 3 JBrowse link 2 263,895,093 263,979,682 RGD:10043358
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:11554173
G Pthlh parathyroid hormone-like hormone JBrowse link 4 181,663,425 181,674,181 RGD:11554173
G Slc9a1 solute carrier family 9 member A1 JBrowse link 5 151,573,122 151,626,360 RGD:11554173
G Slc9a2 solute carrier family 9 member A2 JBrowse link 9 47,386,581 47,491,813 RGD:11554173
G Slc9a3 solute carrier family 9 member A3 JBrowse link 1 31,731,652 31,777,144 RGD:11554173
G Stat6 signal transducer and activator of transcription 6 JBrowse link 7 70,946,228 70,963,542 RGD:11554173
G Tac1 tachykinin, precursor 1 JBrowse link 4 33,638,853 33,646,819 RGD:11554173
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:11554173
G Vip vasoactive intestinal peptide JBrowse link 1 42,169,307 42,177,582 RGD:11554173
brain edema term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abcc8 ATP binding cassette subfamily C member 8 JBrowse link 1 102,110,708 102,191,287 RGD:1598635
RGD:12791991
G Aqp1 aquaporin 1 (Colton blood group) JBrowse link 4 85,551,503 85,563,683 RGD:5148033
G Aqp4 aquaporin 4 JBrowse link 18 6,766,009 6,782,757 RGD:5148010
RGD:5490129
RGD:5490126
RGD:5490122
RGD:5148033
RGD:5148020
G Avpr1a arginine vasopressin receptor 1A JBrowse link 7 67,341,366 67,345,290 RGD:2300375
G C5 complement C5 JBrowse link 3
3
14,049,993
14,206,466
14,113,931
14,229,141
RGD:1600655
G Cp ceruloplasmin JBrowse link 2 104,744,249 104,803,034 RGD:1599627
G Cxcl2 C-X-C motif chemokine ligand 2 JBrowse link 14 18,731,346 18,733,391 RGD:5135068
G Dmd dystrophin JBrowse link X 51,149,358 53,519,271 RGD:6771363
G F2 coagulation factor II JBrowse link 3 80,529,468 80,542,993 RGD:5490126
G F2r coagulation factor II (thrombin) receptor JBrowse link 2 26,118,760 26,135,340 RGD:5490126
G Gfap glial fibrillary acidic protein JBrowse link 10 90,990,762 90,999,435 RGD:5490129
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:10766444
G Icam1 intercellular adhesion molecule 1 JBrowse link 8 22,035,287 22,047,049 RGD:4145390
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:6771363
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:5490126
RGD:11554173
G Myl9 myosin light chain 9 JBrowse link 3 152,857,573 152,863,961 RGD:11554173
G Mylk myosin light chain kinase JBrowse link 11 69,013,060 69,260,039 RGD:11554173
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:11554173
G Ntn1 netrin 1 JBrowse link 10 54,761,925 54,982,072 RGD:11554173
G Plat plasminogen activator, tissue type JBrowse link 16 74,098,263 74,122,897 RGD:6483826
G Plau plasminogen activator, urokinase JBrowse link 15 3,644,296 3,650,765 RGD:6483826
RGD:11554173
G S100b S100 calcium binding protein B JBrowse link 20 13,130,633 13,142,856 RGD:5508832
RGD:11554173
G Serpine2 serpin family E member 2 JBrowse link 9 85,560,852 85,629,410 RGD:2317927
G Serpinf1 serpin family F member 1 JBrowse link 10 62,241,750 62,254,145 RGD:8554891
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:11554173
G Vegfa vascular endothelial growth factor A JBrowse link 9 17,340,341 17,355,681 RGD:1580557
RGD:5148033
Cardiac Edema term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aqp1 aquaporin 1 (Colton blood group) JBrowse link 4 85,551,503 85,563,683 RGD:11554173
G Ift122 intraflagellar transport 122 JBrowse link 4 147,756,574 147,826,983 RGD:11554173
G Ubiad1 UbiA prenyltransferase domain containing 1 JBrowse link 5 165,247,630 165,259,228 RGD:11554173
Dehydrated Hereditary Stomatocytosis, Pseudohyperkalemia, and Perinatal Edema term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Piezo1 piezo-type mechanosensitive ion channel component 1 JBrowse link 19 55,305,494 55,367,680 RGD:7240710
RGD:8554872
Greenberg Dysplasia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lbr lamin B receptor JBrowse link 13 100,431,390 100,450,209 RGD:7240710
RGD:8554872
RGD:9588626
Hydrops Fetalis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alb albumin JBrowse link 14 19,176,275 19,191,793 RGD:11036098
G Ccbe1 collagen and calcium binding EGF domains 1 JBrowse link 18 61,758,754 62,013,194 RGD:11554173
G Chrna1 cholinergic receptor nicotinic alpha 1 subunit JBrowse link 3 60,445,657 60,460,724 RGD:8554872
G Ctsa cathepsin A JBrowse link 3 161,298,750 161,304,627 RGD:8554872
G Dnah14 dynein axonemal heavy chain 14 JBrowse link 13
13
99,886,373
101,936,210
100,072,674
101,973,640
RGD:8554872
G Fzd6 frizzled class receptor 6 JBrowse link 7 77,898,329 77,931,034 RGD:8554872
G Galnt14 polypeptide N-acetylgalactosaminyltransferase 14 JBrowse link 6 24,770,308 24,985,711 RGD:8554872
G Gusb glucuronidase, beta JBrowse link 12 30,202,066 30,215,583 RGD:8554872
G Jak3 Janus kinase 3 JBrowse link 16 20,107,471 20,120,678 RGD:8554872
G Myom1 myomesin 1 JBrowse link 9 119,353,840 119,469,196 RGD:8554872
G Neb nebulin JBrowse link 3 37,658,081 37,855,843 RGD:8554872
G Pigc phosphatidylinositol glycan anchor biosynthesis, class C JBrowse link 13 79,886,832 79,889,305 RGD:8554872
G RGD1309106 similar to hypothetical protein JBrowse link 13 79,856,479 79,901,830 RGD:8554872
G Sftpa1 surfactant protein A1 JBrowse link 16 18,716,019 18,719,404 RGD:4143453
G Thsd1 thrombospondin type 1 domain containing 1 JBrowse link 16 74,680,621 74,712,368 RGD:8554872
G Ubn1 ubinuclein 1 JBrowse link 10 10,690,224 10,725,655 RGD:8554872
Hydrops Fetalis, Nonimmune, and/or Atrial Septal Defect term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ephb4 EPH receptor B4 JBrowse link 12 22,393,338 22,418,332 RGD:8554872
RGD:7240710
HYDROPS, LACTIC ACIDOSIS, AND SIDEROBLASTIC ANEMIA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Lars2 leucyl-tRNA synthetase 2, mitochondrial JBrowse link 8 132,441,277 132,537,176 RGD:8554872
RGD:7240710
PEHO Syndrome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccdc88a coiled coil domain containing 88A JBrowse link 14 113,771,093 113,936,376 RGD:8554872
G Igf1 insulin-like growth factor 1 JBrowse link 7 28,412,123 28,491,815 RGD:8548849
G Kif1a kinesin family member 1A JBrowse link 9 100,171,851 100,253,626 RGD:8554872
G Znhit3 zinc finger, HIT-type containing 3 JBrowse link 10 72,227,710 72,235,932 RGD:8554872
RGD:7240710
Progressive Encephalopathy, Early-Onset, with Brain Edema and/or Leukoencephalopathy term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Naxe NAD(P)HX epimerase JBrowse link 2 187,424,319 187,426,410 RGD:8554872
Progressive Encephalopathy, Early-Onset, with Brain Edema and/or Leukoencephalopathy 1 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Naxe NAD(P)HX epimerase JBrowse link 2 187,424,319 187,426,410 RGD:7240710
Progressive Encephalopathy, Early-Onset, with Brain Edema and/or Leukoencephalopathy 2 term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Naxd NAD(P)HX dehydratase JBrowse link 16 83,326,228 83,342,711 RGD:7240710

Term paths to the root
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Term Annotations click to browse term
  disease 14920
    Pathological Conditions, Signs and Symptoms 7743
      Signs and Symptoms 4469
        Edema 84
          Cardiac Edema 3
          Edema, Familial Idiopathic, Prepubertal 0
          Familial Enteropathy with Villous Edema and Immunoglobulin G2 Deficiency 0
          HYDROPS, LACTIC ACIDOSIS, AND SIDEROBLASTIC ANEMIA 1
          Hydrops Fetalis + 20
          Ketoadipicaciduria 0
          Landy Donnai Syndrome 0
          brain edema + 32
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.