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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Parasitemia
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Accession:DOID:9000518 term browser browse the term
Definition:The presence of parasites (especially malarial parasites) in the blood. (Dorland, 27th ed)
Synonyms:exact_synonym: parasitemias
 primary_id: MESH:D018512
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
 
cerebral malaria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin I converting enzyme 2 susceptibility ISO DNA:SNP:intron 1: C>T RGD PMID:20117248 RGD:40818420 NCBI chr  X:32,050,734...32,095,860
Ensembl chr  X:32,049,931...32,096,016
JBrowse link
G Aqp4 aquaporin 4 disease_progression ISO protein:increased expression:astrocyte: RGD PMID:21904632 RGD:8698661 NCBI chr18:6,766,009...6,782,757
Ensembl chr18:6,765,945...6,782,996
JBrowse link
G Cast calpastatin ISO protein:increased express:brain RGD PMID:16236382 RGD:5509817 NCBI chr 2:1,452,111...1,561,669
Ensembl chr 2:1,452,116...1,561,464
JBrowse link
G Cd36 CD36 molecule ISO RGD PMID:17367535 RGD:6893527 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Il1rl1 interleukin 1 receptor-like 1 treatment ISO RGD PMID:25682948 RGD:40400741 NCBI chr 9:47,133,483...47,184,316
Ensembl chr 9:47,134,034...47,182,170
JBrowse link
G Il33 interleukin 33 treatment ISO protein:increased expression:brain RGD PMID:25659095, PMID:25682948 RGD:39938955, RGD:40400741 NCBI chr 1:248,112,611...248,147,030
Ensembl chr 1:248,132,090...248,147,029
JBrowse link
G Jak3 Janus kinase 3 ISO RGD PMID:22363534 RGD:11531103 NCBI chr16:20,107,471...20,120,678
Ensembl chr16:20,109,200...20,120,668
JBrowse link
G Lta lymphotoxin alpha ISO RGD PMID:12021316 RGD:10449455 NCBI chr20:4,851,889...4,854,677
Ensembl chr20:4,852,496...4,854,677
JBrowse link
G Nrg1 neuregulin 1 treatment ISO mRNA, protein:increased expression:cerebral cortex (mouse)
human protein in a mouse model
RGD PMID:29636063, PMID:24433482 RGD:39456084, RGD:39456102 NCBI chr16:62,969,573...64,065,063
Ensembl chr16:63,837,216...64,057,434
JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma ISO RGD PMID:25775137 RGD:38599200 NCBI chr 6:51,465,696...51,501,234
Ensembl chr 6:51,465,908...51,498,337
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 ISO mRNA:decreased expression:brain (mouse) RGD PMID:29107705 RGD:39456137 NCBI chr 5:124,568,845...124,642,569
Ensembl chr 5:124,574,079...124,642,569
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B ISO RGD PMID:12228317 RGD:5131158 NCBI chr 5:163,136,390...163,167,299
Ensembl chr 5:163,136,390...163,167,299
JBrowse link
malaria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A treatment
susceptibility
ISO DNA:SNP: :c3435C>T(human)
DNA:hypermethylation:promoter
DNA:SNPs,haplotype: :rs2032582, rs1128503 (human)
DNA:haplotype: :1236C>T, 2677G>T,3435C>T (human)
RGD PMID:28934955, PMID:19331170, PMID:28422980, PMID:17015054 RGD:39456120, RGD:39457680, RGD:39457679, RGD:39456123 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Ace angiotensin I converting enzyme severity ISO RGD PMID:31234939 RGD:39939120 NCBI chr10:94,170,766...94,213,831
Ensembl chr10:94,170,766...94,187,822
JBrowse link
G Ackr1 atypical chemokine receptor 1 susceptibility ISO ClinVar Annotator: match by term: Plasmodium vivax, resistance to
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:7663520, PMID:8547665, PMID:8651934, PMID:10570183, PMID:10791881, PMID:17304246, PMID:18179887, PMID:18621010, PMID:19180233, PMID:19620399, PMID:20932074 NCBI chr13:91,827,310...91,828,875 JBrowse link
G Aicda activation-induced cytidine deaminase ISO protein:increased expression: B cell RGD PMID:27980783 RGD:30310233 NCBI chr 4:155,359,909...155,371,104
Ensembl chr 4:155,359,921...155,369,671
JBrowse link
G Ank1 ankyrin 1 ISS OMIM:609148 | OMIM:611162 MouseDO NCBI chr16:73,681,422...73,912,605
Ensembl chr16:73,681,422...73,827,488
JBrowse link
G Apoe apolipoprotein E ISO DNA:missense mutations:cds:p.C112R, p.C158R (human) RGD PMID:24116184 RGD:11039486 NCBI chr 1:80,612,894...80,616,820
Ensembl chr 1:80,612,895...80,617,057
JBrowse link
G Aqp4 aquaporin 4 ISS OMIM:609148 | OMIM:611162 MouseDO NCBI chr18:6,766,009...6,782,757
Ensembl chr18:6,765,945...6,782,996
JBrowse link
G Cd36 CD36 molecule susceptibility ISO ClinVar Annotator: match by synonym: Malaria, cerebral, susceptibility to
ClinVar Annotator: match by term: Malaria, cerebral, susceptibility to
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Susceptibility to malaria
ClinVar
CTD
OMIM
PMID:10890433, PMID:18305138, PMID:19403559, PMID:25741868 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Cd40 CD40 molecule severity ISO RGD PMID:11485931 RGD:11352239 NCBI chr 3:161,519,789...161,534,943
Ensembl chr 3:161,519,743...161,534,704
JBrowse link
G Cd40lg CD40 ligand severity ISO RGD PMID:11485931 RGD:11352239 NCBI chr  X:159,703,703...159,714,886
Ensembl chr  X:159,703,578...159,716,562
JBrowse link
G Cish cytokine inducible SH2-containing protein susceptibility ISO ClinVar Annotator: match by OMIM:611162
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:20484391 NCBI chr 8:116,054,547...116,059,494
Ensembl chr 8:116,054,465...116,060,723
JBrowse link
G Crp C-reactive protein ISO CTD Direct Evidence: marker/mechanism CTD PMID:8730300 NCBI chr13:91,080,448...91,081,358
Ensembl chr13:91,054,974...91,093,713
JBrowse link
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 treatment
disease_progression
ISO RGD PMID:28892065, PMID:28892065 RGD:38455986, RGD:38455986 NCBI chr 9:67,699,397...67,706,068
Ensembl chr 9:67,699,379...67,706,065
JBrowse link
G Fcgr2a Fc fragment of IgG receptor IIa susceptibility ISO DNA:missense mutation:cds:p.H131R (human)
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Malaria, severe, susceptibility to
CTD
OMIM
ClinVar
PMID:8636449, PMID:9843982, PMID:10675363, PMID:15367919, PMID:18347005, PMID:19915573, PMID:19965803, PMID:21109570, PMID:22992668, PMID:24033266, PMID:19965803 RGD:5147921 NCBI chr13:91,146,878...91,163,691
Ensembl chr13:91,168,973...91,198,036
Ensembl chr13:91,168,973...91,198,036
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb susceptibility ISO ClinVar Annotator: match by synonym: Malaria, resistance to
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:12115230, PMID:15459183, PMID:16115811, PMID:16170323, PMID:17435165, PMID:20385827 NCBI chr13:89,329,298...89,343,916
Ensembl chr13:89,327,794...89,433,815
JBrowse link
G Foxp3 forkhead box P3 disease_progression ISO RGD PMID:19338000, PMID:16169501 RGD:38455985, RGD:38455992 NCBI chr  X:15,753,175...15,768,648
Ensembl chr  X:15,753,175...15,768,522
JBrowse link
G G6pd glucose-6-phosphate dehydrogenase susceptibility
severity
ISO DNA:SNPs: :multiple
ClinVar Annotator: match by term: Susceptibility to malaria
CTD Direct Evidence: marker/mechanism
DNA:point mutation:cds:c.968T>C (human)
ClinVar
CTD
OMIM
PMID:5448, PMID:1303173, PMID:1551674, PMID:1562739, PMID:1631957, PMID:1805484, PMID:1924316, PMID:1972698, PMID:1978554, PMID:1978555, PMID:2321910, PMID:2503817, PMID:2572288, PMID:2633878, PMID:2836867, PMID:2849540, PMID:2912069, PMID:3338798, PMID:3393536, PMID:3446582, PMID:4359638, PMID:4388132, PMID:4435794, PMID:4837298, PMID:4974311, PMID:5305539, PMID:5369703, PMID:5770172, PMID:6015571, PMID:6698555, PMID:7203486, PMID:7283560, PMID:7327562, PMID:7390473, PMID:7806085, PMID:7947239, PMID:7947250, PMID:7949118, PMID:8118045, PMID:8611726, PMID:8807321, PMID:8860013, PMID:8956035, PMID:9342374, PMID:9427729, PMID:9589612, PMID:9858856, PMID:10734064, PMID:11445808, PMID:11499668, PMID:11793482, PMID:12028056, PMID:12367584, PMID:12497642, PMID:12737938, PMID:12768444, PMID:14278484, PMID:15223006, PMID:15315792, PMID:15349799, PMID:15502081, PMID:15735168, PMID:15906717, PMID:16119988, PMID:16136268, PMID:16155737, PMID:16356170, PMID:16528451, PMID:16777444, PMID:16927025, PMID:17726510, PMID:17959407, PMID:18046504, PMID:18177777, PMID:18329300, PMID:19589177, PMID:19594365, PMID:20007901, PMID:20236109, PMID:20602793, PMID:21446359, PMID:21677401, PMID:21989994, PMID:22018328, PMID:22165289, PMID:22293322, PMID:22906047, PMID:23479361, PMID:23926329, PMID:23965028, PMID:24033266, PMID:24460025, PMID:24586352, PMID:25326637, PMID:25548459, PMID:25741868, PMID:25775246, PMID:26060661, PMID:26226515, PMID:26633385, PMID:27053284, PMID:27213370, PMID:27287612, PMID:27880809, PMID:28492532, PMID:30315739, PMID:32860008, PMID:25015414, PMID:24615128 RGD:10449111, RGD:10449115 NCBI chr  X:156,274,800...156,293,935
Ensembl chr  X:156,274,800...156,293,926
JBrowse link
G Gypc glycophorin C (Gerbich blood group) susceptibility ISO ClinVar Annotator: match by term: Malaria, resistance to
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:1991173, PMID:5011657, PMID:8157284, PMID:11719395, PMID:12469115, PMID:21061946 NCBI chr18:25,312,386...25,344,614
Ensembl chr18:25,312,387...25,344,614
JBrowse link
G Hbb hemoglobin subunit beta resistance
susceptibility
ISO ClinVar Annotator: match by term: Susceptibility to malaria
ClinVar Annotator: match by term: Malaria, resistance to
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:49057, PMID:81926, PMID:88735, PMID:700140, PMID:893136, PMID:909565, PMID:1301203, PMID:1376298, PMID:1390250, PMID:1427786, PMID:1463768, PMID:1483699, PMID:1634236, PMID:1634368, PMID:1680789, PMID:1734721, PMID:1769663, PMID:1802884, PMID:1917531, PMID:1960615, PMID:1967205, PMID:1986365, PMID:2004023, PMID:2200760, PMID:2239966, PMID:2296310, PMID:2298457, PMID:2412200, PMID:2446680, PMID:2577233, PMID:2579336, PMID:2582106, PMID:2713503, PMID:2867271, PMID:2888754, PMID:2891298, PMID:2893541, PMID:2898142, PMID:2898460, PMID:2898955, PMID:2903765, PMID:3031297, PMID:3048433, PMID:3354556, PMID:3422218, PMID:3462712, PMID:3690667, PMID:3752087, PMID:3821796, PMID:4232783, PMID:4351905, PMID:5658717, PMID:5863839, PMID:6162860, PMID:6166632, PMID:6188062, PMID:6189507, PMID:6190800, PMID:6198908, PMID:6264391, PMID:6264477, PMID:6268660, PMID:6270663, PMID:6272289, PMID:6275383, PMID:6280057, PMID:6285354, PMID:6304979, PMID:6457059, PMID:6583683, PMID:6583702, PMID:6584911, PMID:6585831, PMID:6714226, PMID:6859036, PMID:6896219, PMID:7137165, PMID:7151176, PMID:7177196, PMID:7229029, PMID:7312624, PMID:7395858, PMID:7522523, PMID:7558878, PMID:7668219, PMID:7993409, PMID:8095930, PMID:8199597, PMID:8201467, PMID:8330981, PMID:8373896, PMID:8462981, PMID:8602996, PMID:8619407, PMID:8839873, PMID:8917506, PMID:9048934, PMID:9101288, PMID:9140720, PMID:9401495, PMID:9490703, PMID:9556665, PMID:9653159, PMID:9859938, PMID:10335989, PMID:10602954, PMID:10612821, PMID:11001883, PMID:11425418, PMID:11545326, PMID:11559932, PMID:11713529, PMID:11741197, PMID:11830454, PMID:11857746, PMID:11880644, PMID:11939510, PMID:12124399, PMID:12144057, PMID:12149194, PMID:12764548, PMID:12850492, PMID:13066514, PMID:13108995, PMID:13115700, PMID:13369537, PMID:13464827, PMID:13618691, PMID:13685866, PMID:13716853, PMID:13852872, PMID:14405428, PMID:14492555, PMID:14576320, PMID:14613965, PMID:14734204, PMID:14808148, PMID:15000665, PMID:15108284, PMID:15114532, PMID:15470211, PMID:15481886, PMID:15654898, PMID:15973412, PMID:16001361, PMID:16114182, PMID:16175509, PMID:16291734, PMID:16311287, PMID:16470532, PMID:16750922, PMID:17278112, PMID:17287491, PMID:17331080, PMID:17365006, PMID:17774955, PMID:18024613, PMID:18048408, PMID:18192399, PMID:18294253, PMID:18568278, PMID:18603555, PMID:19000664, PMID:19061217, PMID:19254853, PMID:19440680, PMID:19758965, PMID:19841268, PMID:19958185, PMID:20132300, PMID:20301551, PMID:20301599, PMID:20305663, PMID:20395516, PMID:20412082, PMID:20437613, PMID:20492708, PMID:20642331, PMID:20704537, PMID:20861612, PMID:20954261, PMID:21119755, PMID:21131035, PMID:21228398, PMID:21389146, PMID:21417574, PMID:21529713, PMID:21732929, PMID:21797703, PMID:22010933, PMID:22028795, PMID:22075726, PMID:22260787, PMID:22271886, PMID:22335963, PMID:22392582, PMID:22625666, PMID:22975760, PMID:23162295, PMID:23234478, PMID:23297836, PMID:23321370, PMID:23348723, PMID:23425204, PMID:23590658, PMID:23637309, PMID:23647352, PMID:23729725, PMID:24033266, PMID:24368026, PMID:24493127, PMID:24581976, PMID:24857915, PMID:25023084, PMID:25023085, PMID:25087612, PMID:25089872, PMID:25155404, PMID:25332589, PMID:25370867, PMID:25525159, PMID:25572186, PMID:25741868, PMID:25849334, PMID:25856402, PMID:26029792, PMID:26097845, PMID:26193974, PMID:26275168, PMID:26372199, PMID:26467025, PMID:26554862, PMID:27117572, PMID:27263053, PMID:27427187, PMID:27690257, PMID:27821015, PMID:28356267, PMID:28366028, PMID:28391758, PMID:28492532, PMID:28635337, PMID:28670940, PMID:29695942, PMID:30311386, PMID:31714438, PMID:32581362, PMID:32860008, PMID:11001883 RGD:1600894 NCBI chr 1:168,971,269...168,972,680
Ensembl chr 1:168,971,274...168,972,725
JBrowse link
G Hmox1 heme oxygenase 1 ISS OMIM:609148 | OMIM:611162 MouseDO NCBI chr19:14,508,634...14,515,455
Ensembl chr19:14,508,616...14,515,456
JBrowse link
G Hp haptoglobin ISO CTD Direct Evidence: marker/mechanism CTD PMID:8730300, PMID:16597321 NCBI chr19:42,096,255...42,100,805
Ensembl chr19:42,097,995...42,100,804
JBrowse link
G Icam1 intercellular adhesion molecule 1 susceptibility ISO ClinVar Annotator: match by synonym: Malaria, cerebral, susceptibility to
ClinVar Annotator: match by term: Susceptibility to malaria
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:9259284, PMID:9861406, PMID:10417733, PMID:10699175, PMID:23609612, PMID:25741868 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059
JBrowse link
G Ifng interferon gamma ISS OMIM:609148 | OMIM:611162 MouseDO NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419
JBrowse link
G Il1rl1 interleukin 1 receptor-like 1 ISO RGD PMID:28359899 RGD:39938859 NCBI chr 9:47,133,483...47,184,316
Ensembl chr 9:47,134,034...47,182,170
JBrowse link
G Il33 interleukin 33 ISO protein:increased expression:serum: RGD PMID:28359899 RGD:39938859 NCBI chr 1:248,112,611...248,147,030
Ensembl chr 1:248,132,090...248,147,029
JBrowse link
G Kir3dl1 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 1 severity ISO DNA:deletion:cds RGD PMID:21889618 RGD:38676475 NCBI chr 1:73,306,564...73,345,009
Ensembl chr 1:73,307,569...73,344,955
JBrowse link
G Ltbr lymphotoxin beta receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:15788153 NCBI chr 4:157,822,838...157,829,291
Ensembl chr 4:157,822,840...157,829,241
JBrowse link
G Mapkapk3 MAPK activated protein kinase 3 ISO ClinVar Annotator: match by synonym: Susceptibility to malaria ClinVar PMID:20484391 NCBI chr 8:116,012,126...116,046,012
Ensembl chr 8:116,012,121...116,045,954
JBrowse link
G Mir122 microRNA 122 treatment ISO RGD PMID:28123381 RGD:35673288 NCBI chr18:60,755,285...60,755,369 JBrowse link
G Mir142 microRNA 142 treatment ISO RGD PMID:28123381 RGD:35673288 NCBI chr10:75,050,839...75,050,925
Ensembl chr10:75,050,832...75,050,942
JBrowse link
G Mirlet7a1 microRNA let-7a-1 treatment ISO RGD PMID:28123381 RGD:35673288 NCBI chr17:16,417,853...16,417,946
Ensembl chr17:16,417,855...16,417,954
JBrowse link
G Mirlet7c1 microRNA let-7c-1 treatment ISO RGD PMID:28123381 RGD:35673288 NCBI chr11:16,052,873...16,052,966
Ensembl chr11:16,052,868...16,052,975
JBrowse link
G Mki67 marker of proliferation Ki-67 ISO associated with Lung Neoplasms RGD PMID:21931708 RGD:6483517 NCBI chr 1:207,993,895...208,020,454
Ensembl chr 1:207,993,895...208,020,454
JBrowse link
G Ncr3 natural cytotoxicity triggering receptor 3 susceptibility ISO ClinVar Annotator: match by OMIM:609148
CTD Direct Evidence: marker/mechanism
ClinVar
CTD
OMIM
PMID:17208487 NCBI chr20:5,170,169...5,175,773
Ensembl chr20:5,170,215...5,175,773
JBrowse link
G Nos2 nitric oxide synthase 2 susceptibility ISO ClinVar Annotator: match by term: Malaria, severe, resistance to
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: Malaria, resistance to
ClinVar
CTD
OMIM
PMID:9457101, PMID:12433515 NCBI chr10:66,188,290...66,221,621
Ensembl chr10:66,189,786...66,313,190
JBrowse link
G Pklr pyruvate kinase L/R susceptibility ISO
ISS
DNA:mutations, haplotype:multiple (human)
OMIM:609148 | OMIM:611162
DNA:missense mutation:cds:p.I90N (mouse)
MouseDO PMID:20377593, PMID:14595440 RGD:11535999, RGD:11537407 NCBI chr 2:188,449,158...188,458,034
Ensembl chr 2:188,449,210...188,459,592
JBrowse link
G Prf1 perforin 1 ISO RGD PMID:21525386 RGD:6482803 NCBI chr20:30,915,294...30,920,804
Ensembl chr20:30,915,213...30,921,382
JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) susceptibility ISO ClinVar Annotator: match by term: Susceptibility to malaria
ClinVar Annotator: match by term: Malaria, cerebral, resistance to
CTD Direct Evidence: marker/mechanism
OMIM
ClinVar
CTD
PMID:1378323, PMID:1737855, PMID:2146504, PMID:7689982, PMID:7919393, PMID:7949112, PMID:8434259, PMID:9312167, PMID:10403343, PMID:14618420, PMID:19229254, PMID:25741868 NCBI chr10:90,296,144...90,312,401
Ensembl chr10:90,296,141...90,312,386
JBrowse link
G Spp1 secreted phosphoprotein 1 ISO RGD PMID:16552072 RGD:1581333 NCBI chr14:6,673,686...6,679,965
Ensembl chr14:6,673,686...6,679,901
JBrowse link
G Tbx21 T-box transcription factor 21 ISO RGD PMID:19338000 RGD:38455985 NCBI chr10:85,032,799...85,049,331
Ensembl chr10:85,032,799...85,049,331
JBrowse link
G Tirap TIR domain containing adaptor protein susceptibility ISO ClinVar Annotator: match by synonym: Malaria, resistance to
CTD Direct Evidence: marker/mechanism
ClinVar
OMIM
CTD
PMID:16991088, PMID:17322885, PMID:18305471 NCBI chr 8:36,382,029...36,399,625
Ensembl chr 8:36,385,353...36,388,224
JBrowse link
G Tnf tumor necrosis factor susceptibility ISO DNA:polymorphism:promoter:-376G>A
CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by synonym: Malaria, cerebral, susceptibility to
CTD
OMIM
ClinVar
PMID:8056188, PMID:9818939, PMID:10369255, PMID:10450718, PMID:11261930, PMID:11506397, PMID:11826025, PMID:11896460, PMID:12485196, PMID:12746914, PMID:14681301, PMID:14718719, PMID:16418737, PMID:16865291, PMID:10369255 RGD:1624967 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tslp thymic stromal lymphopoietin ISO mRNA:altered expression:multiple (mouse) RGD PMID:28955823 RGD:38596344 NCBI chr18:25,613,601...25,618,066
Ensembl chr18:25,613,831...25,617,361
JBrowse link
Malarial Anemia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcgr3a Fc fragment of IgG receptor IIIa severity
susceptibility
ISO DNA:polymorphism: :p.F176V (human) RGD PMID:20231419, PMID:23045477 RGD:11040771, RGD:11344971 NCBI chr13:89,385,775...89,396,047
Ensembl chr13:89,385,859...89,396,051
JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) severity ISO DNA:snp:promoter:g.-5699T>C (human) RGD PMID:16960783 RGD:10450507 NCBI chr10:90,296,144...90,312,401
Ensembl chr10:90,296,141...90,312,386
JBrowse link
G Tlr9 toll-like receptor 9 susceptibility ISO DNA:SNP:promoter:g.-1237T>C (rs5743836) (human) RGD PMID:23045477 RGD:11344971 NCBI chr 8:114,916,122...114,920,171
Ensembl chr 8:114,916,122...114,920,171
JBrowse link
Plasmodium falciparum malaria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abo ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase susceptibility ISO DNA:SNPs,haplotype:multiple RGD PMID:18003641 RGD:39938831 NCBI chr 3:4,374,679...4,394,374
Ensembl chr 3:4,374,602...4,394,428
JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 ISO protein:decreased activity:plasma (human) RGD PMID:20062916 RGD:10449041 NCBI chr 3:5,519,921...5,558,390
Ensembl chr 3:5,519,990...5,558,166
JBrowse link
G Bsg basigin (Ok blood group) ISO CTD Direct Evidence: therapeutic CTD PMID:22080952, PMID:26195724 NCBI chr 7:12,875,536...12,882,753
Ensembl chr 7:12,875,537...12,882,753
JBrowse link
G Cast calpastatin ISO protein:alter localization:erythrocyte RGD PMID:17359359 RGD:5509812 NCBI chr 2:1,452,111...1,561,669
Ensembl chr 2:1,452,116...1,561,464
JBrowse link
G Ccl4 C-C motif chemokine ligand 4 ISO mRNA, protein:increased expression:blood, RGD PMID:15972509 RGD:5683898 NCBI chr10:70,870,926...70,886,357
Ensembl chr10:70,884,531...70,886,355
JBrowse link
G Clec11a C-type lectin domain containing 11A ISO CTD Direct Evidence: marker/mechanism CTD PMID:19884328 NCBI chr 1:100,290,374...100,293,515
Ensembl chr 1:100,289,295...100,293,558
JBrowse link
G Fas Fas cell surface death receptor ISO CTD Direct Evidence: marker/mechanism CTD PMID:21625619 NCBI chr 1:252,589,785...252,624,790
Ensembl chr 1:252,589,785...252,624,790
JBrowse link
G Fcgr2a Fc fragment of IgG receptor IIa severity ISO DNA:missense mutation:cds:p.R131H (rs1801274) (human) RGD PMID:18194515 RGD:5147927 NCBI chr13:91,146,878...91,163,691
Ensembl chr13:91,168,973...91,198,036
Ensembl chr13:91,168,973...91,198,036
JBrowse link
G G6pd glucose-6-phosphate dehydrogenase severity ISO DNA:missense mutation:cds:202G>A (p.V68M) (human) RGD PMID:24943486 RGD:10449113 NCBI chr  X:156,274,800...156,293,935
Ensembl chr  X:156,274,800...156,293,926
JBrowse link
G Gstp1 glutathione S-transferase pi 1 severity ISO RGD PMID:19635899 RGD:10450848 NCBI chr 1:219,291,679...219,294,147
Ensembl chr 1:219,291,679...219,294,147
JBrowse link
G Hbb hemoglobin subunit beta ISO CTD Direct Evidence: marker/mechanism CTD PMID:20305663 NCBI chr 1:168,971,269...168,972,680
Ensembl chr 1:168,971,274...168,972,725
JBrowse link
G Hp haptoglobin severity ISO DNA:missense mutation:cds:p.K54E (human) RGD PMID:24478401 RGD:11041793 NCBI chr19:42,096,255...42,100,805
Ensembl chr19:42,097,995...42,100,804
JBrowse link
G Il13 interleukin 13 ISO protein:increased expression:plasma RGD PMID:21985368 RGD:5684362 NCBI chr10:38,982,909...38,985,466
Ensembl chr10:38,982,909...38,985,466
JBrowse link
G Mbl2 mannose binding lectin 2 susceptibility ISO DNA:haplotype:exon: RGD PMID:18396436 RGD:11530064 NCBI chr 1:248,435,069...248,442,669
Ensembl chr 1:248,723,397...248,729,962
JBrowse link
G RT1-Bb RT1 class II, locus Bb susceptibility ISO DNA:polymorphism:cds:HLA-DQB1*0501 (human) RGD PMID:11076705 RGD:11041780 NCBI chr20:4,043,726...4,049,367
Ensembl chr20:4,039,413...4,049,711
JBrowse link
G Tnf tumor necrosis factor severity ISO protein:increased expression:plasma RGD PMID:1984482 RGD:10450571 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
Plasmodium vivax malaria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ackr1 atypical chemokine receptor 1 ISO OMIM NCBI chr13:91,827,310...91,828,875 JBrowse link
Pregnancy-associated Malaria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 ISO RGD PMID:24717969 RGD:11041890 NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16023
    disease by infectious agent 1774
      parasitic infectious disease 240
        Parasitemia 64
          malaria + 64
Path 2
Term Annotations click to browse term
  disease 16023
    Pathological Conditions, Signs and Symptoms 8754
      Pathologic Processes 6130
        Shock 370
          Systemic Inflammatory Response Syndrome 350
            Sepsis 348
              Parasitemia 64
                malaria + 64
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.