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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Asthenozoospermia
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Accession:DOID:9001513 term browser browse the term
Definition:A condition in which the percentage of motile sperm is abnormally low.
Synonyms:exact_synonym: Astheno Teratozoospermia;   Astheno Teratozoospermias;   Asthenoteratozoospermia;   Asthenoteratozoospermias
 primary_id: MESH:D053627;   RDO:0007631
For additional species annotation, visit the Alliance of Genome Resources.


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Asthenozoospermia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BSCL2 BSCL2 lipid droplet biogenesis associated, seipin ISO CTD Direct Evidence: marker/mechanism CTD PMID:26181198 NCBI chr11:58,046,842...58,064,219
Ensembl chr11:61,399,314...61,416,494
JBrowse link
G CFAP251 cilia and flagella associated protein 251 ISO ClinVar Annotator: match by term: asthenozoospermia ClinVar PMID:30122541 NCBI chr12:119,519,423...119,605,434
Ensembl chr12:122,888,236...122,972,582
JBrowse link
G PLAU plasminogen activator, urokinase ISO mRNA, protein:decreased expression:testes, epididymis (rat)
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:18998460 RGD:7241809 NCBI chr10:70,433,340...70,441,569
Ensembl chr10:73,105,895...73,113,136
JBrowse link
spermatogenic failure 7 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CATSPER1 cation channel sperm associated 1 ISO OMIM NCBI chr11:61,381,175...61,391,455
Ensembl chr11:64,707,912...64,717,689
JBrowse link
G LOC103785466 stereocilin ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: SPERMATOGENIC FAILURE 7
CTD
ClinVar
PMID:24033266, PMID:25741868 NCBI chr15:22,660,952...22,706,416
Ensembl chr15:40,740,387...40,757,999
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 12770
    disease of anatomical entity 12302
      reproductive system disease 2509
        male reproductive system disease 1719
          male infertility 156
            Asthenozoospermia 5
              oligoasthenoteratozoospermia 0
              spermatogenic failure 7 2
Path 2
Term Annotations click to browse term
  disease 12770
    disease of anatomical entity 12302
      Urogenital Diseases 3671
        Female Urogenital Diseases and Pregnancy Complications 1836
          Female Urogenital Diseases 1544
            female reproductive system disease 1540
              infertility 208
                male infertility 156
                  Asthenozoospermia 5
                    oligoasthenoteratozoospermia 0
                    spermatogenic failure 7 2
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.