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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Asthenozoospermia
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Accession:DOID:9001513 term browser browse the term
Definition:A condition in which the percentage of motile sperm is abnormally low.
Synonyms:exact_synonym: Astheno Teratozoospermia;   Astheno Teratozoospermias;   Asthenoteratozoospermia;   Asthenoteratozoospermias
 primary_id: MESH:D053627;   RDO:0007631
For additional species annotation, visit the Alliance of Genome Resources.


GViewer not supported for chinchilla.
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Asthenozoospermia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin ISO CTD Direct Evidence: marker/mechanism CTD PMID:26181198 NCBI chrNW_004955599:505,725...514,225
Ensembl chrNW_004955599:507,501...514,151
JBrowse link
G Cfap251 cilia and flagella associated protein 251 ISO ClinVar Annotator: match by term: asthenozoospermia ClinVar PMID:30122541 NCBI chrNW_004955482:6,508,563...6,553,561
Ensembl chrNW_004955482:6,509,281...6,553,835
JBrowse link
G Plau plasminogen activator, urokinase ISO mRNA, protein:decreased expression:testes, epididymis (rat)
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:18998460 RGD:7241809 NCBI chrNW_004955437:17,995,726...18,000,542
Ensembl chrNW_004955437:17,994,537...18,000,209
JBrowse link
spermatogenic failure 7 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Catsper1 cation channel sperm associated 1 ISO OMIM NCBI chrNW_004955422:19,315,640...19,322,868 JBrowse link
G Catsper2 cation channel sperm associated 2 ISO CTD Direct Evidence: marker/mechanism CTD NCBI chrNW_004955409:3,925,106...3,940,566 JBrowse link
G Strc stereocilin ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: SPERMATOGENIC FAILURE 7
CTD
ClinVar
PMID:24033266, PMID:25741868 NCBI chrNW_004955416:10,139,420...10,141,906 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 11834
    disease of anatomical entity 11389
      reproductive system disease 2369
        male reproductive system disease 1606
          male infertility 151
            Asthenozoospermia 6
              oligoasthenoteratozoospermia 0
              spermatogenic failure 7 3
Path 2
Term Annotations click to browse term
  disease 11834
    disease of anatomical entity 11389
      Urogenital Diseases 3462
        Female Urogenital Diseases and Pregnancy Complications 1754
          Female Urogenital Diseases 1483
            female reproductive system disease 1479
              infertility 200
                male infertility 151
                  Asthenozoospermia 6
                    oligoasthenoteratozoospermia 0
                    spermatogenic failure 7 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.