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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Asthenozoospermia
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Accession:DOID:9001513 term browser browse the term
Definition:A condition in which the percentage of motile sperm is abnormally low.
Synonyms:exact_synonym: Astheno Teratozoospermia;   Astheno Teratozoospermias;   Asthenoteratozoospermia;   Asthenoteratozoospermias
 primary_id: MESH:D053627;   RDO:0007631
For additional species annotation, visit the Alliance of Genome Resources.


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Asthenozoospermia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin ISO CTD Direct Evidence: marker/mechanism CTD PMID:26181198 NCBI chrNW_004936581:567,426...576,859 JBrowse link
G Cfap251 cilia and flagella associated protein 251 ISO ClinVar Annotator: match by term: asthenozoospermia ClinVar PMID:30122541 NCBI chrNW_004936558:2,425,768...2,493,311 JBrowse link
G Plau plasminogen activator, urokinase ISO mRNA, protein:decreased expression:testes, epididymis (rat)
CTD Direct Evidence: marker/mechanism
RGD
CTD
PMID:18998460 RGD:7241809 NCBI chrNW_004936521:5,238,128...5,243,829 JBrowse link
spermatogenic failure 7 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Catsper1 cation channel sperm associated 1 ISO OMIM NCBI chrNW_004936599:3,529,621...3,538,291 JBrowse link
G Catsper2 cation channel sperm associated 2 ISO CTD Direct Evidence: marker/mechanism CTD NCBI chrNW_004936471:6,791,490...6,809,048 JBrowse link
G Strc stereocilin ISO CTD Direct Evidence: marker/mechanism
ClinVar Annotator: match by term: SPERMATOGENIC FAILURE 7
CTD
ClinVar
PMID:24033266, PMID:25741868 NCBI chrNW_004936471:6,760,289...6,777,425 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 11962
    disease of anatomical entity 11526
      reproductive system disease 2397
        male reproductive system disease 1629
          male infertility 151
            Asthenozoospermia 6
              oligoasthenoteratozoospermia 0
              spermatogenic failure 7 3
Path 2
Term Annotations click to browse term
  disease 11962
    disease of anatomical entity 11526
      Urogenital Diseases 3504
        Female Urogenital Diseases and Pregnancy Complications 1760
          Female Urogenital Diseases 1492
            female reproductive system disease 1488
              infertility 201
                male infertility 151
                  Asthenozoospermia 6
                    oligoasthenoteratozoospermia 0
                    spermatogenic failure 7 3
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.