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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Teratozoospermia
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Accession:DOID:9002321 term browser browse the term
Definition:Presence of spermatozoa with abnormal morphology over 85 % in sperm.
Synonyms:exact_synonym: teratospermia;   teratospermias;   teratozoospermias
 primary_id: MESH:D000072660
For additional species annotation, visit the Alliance of Genome Resources.


show annotations for term's descendants           Sort by:
 
Teratozoospermia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nectin2 nectin cell adhesion molecule 2 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28689229 NCBI chr 1:80,631,449...80,666,617
Ensembl chr 1:80,631,450...80,666,585
JBrowse link
G Nectin3 nectin cell adhesion molecule 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28689229 NCBI chr11:57,897,879...57,995,193
Ensembl chr11:57,897,879...57,993,548
JBrowse link
G Nos3 nitric oxide synthase 3 ISO CTD Direct Evidence: marker/mechanism CTD PMID:29983398 NCBI chr 4:7,321,908...7,342,404
Ensembl chr 4:7,320,668...7,342,410
JBrowse link
Globozoospermia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spata16 spermatogenesis associated 16 ISO ClinVar Annotator: match by term: Globozoospermia ClinVar PMID:17847006, PMID:24265589, PMID:28492532, PMID:29065458 NCBI chr 2:112,281,326...112,659,911
Ensembl chr 2:112,281,376...112,659,927
JBrowse link
oligoasthenoteratozoospermia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spata20 spermatogenesis associated 20 ISS MouseDO NCBI chr10:82,202,619...82,217,260
Ensembl chr10:82,202,605...82,209,459
JBrowse link
spermatogenic failure 6 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spata16 spermatogenesis associated 16 ISO OMIM NCBI chr 2:112,281,326...112,659,911
Ensembl chr 2:112,281,376...112,659,927
JBrowse link
spermatogenic failure 9 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpy19l2 dpy-19 like 2 ISO ClinVar Annotator: match by OMIM:613958 OMIM
ClinVar
PMID:15533374, PMID:21397063, PMID:21397064, PMID:22653751 NCBI chr 8:25,710,492...25,829,589
Ensembl chr 8:25,710,472...25,829,569
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 16023
    disease of anatomical entity 15278
      reproductive system disease 2584
        male reproductive system disease 1783
          male infertility 177
            Teratozoospermia 6
              Globozoospermia + 2
              oligoasthenoteratozoospermia 1
Path 2
Term Annotations click to browse term
  disease 16023
    disease of anatomical entity 15278
      Urogenital Diseases 4155
        Female Urogenital Diseases and Pregnancy Complications 1915
          Female Urogenital Diseases 1612
            female reproductive system disease 1608
              infertility 240
                male infertility 177
                  Teratozoospermia 6
                    Globozoospermia + 2
                    oligoasthenoteratozoospermia 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.