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ONTOLOGY REPORT - ANNOTATIONS


Term:Emphysema
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Accession:DOID:9002884 term browser browse the term
Definition:A pathological accumulation of air in tissues or organs.
Synonyms:related_synonym: Emphysema, susceptibility to;   PI I;   PI M(MALTON);   PI M(MINERAL SPRINGS);   PI M(PROCIDA);   PI NULL(HONG KONG 1);   PI Q0(HONG KONG 1);   PI S
 primary_id: MESH:D004646;   RDO:0005460
For additional species annotation, visit the Alliance of Genome Resources.


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Emphysema term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Abca3 ATP binding cassette subfamily A member 3 JBrowse link 10 13,723,365 13,780,558 RGD:11554173
G Apoe apolipoprotein E JBrowse link 1 80,612,894 80,616,820 RGD:11554173
G Cd46 CD46 molecule JBrowse link 13 113,786,525 113,818,741 RGD:6483458
G Cebpa CCAAT/enhancer binding protein alpha JBrowse link 1 91,363,492 91,366,164 RGD:11554173
G Ephx1 epoxide hydrolase 1 JBrowse link 13 99,271,390 99,300,580 RGD:8554872
G Fbln5 fibulin 5 JBrowse link 6 125,644,797 125,723,957 RGD:11554173
G Fbn1 fibrillin 1 JBrowse link 3 117,569,708 117,766,160 RGD:1300319
G Kl Klotho JBrowse link 12 942,974 987,206 RGD:10403047
RGD:11554173
G Lox lysyl oxidase JBrowse link 18 47,500,320 47,577,819 RGD:8554872
G Mcam melanoma cell adhesion molecule JBrowse link 8 48,472,824 48,481,005 RGD:7364780
G Mmp1 matrix metallopeptidase 1 JBrowse link 8 5,703,206 5,723,593 RGD:4890371
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:13207325
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:11554173
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:11554173
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A JBrowse link 1 101,511,899 101,515,043 RGD:9999407
G Ppp2r2a protein phosphatase 2, regulatory subunit B, alpha JBrowse link 15 43,673,958 43,733,182 RGD:11554173
G Ppp2r2c protein phosphatase 2, regulatory subunit B, gamma JBrowse link 14 78,679,214 78,763,175 RGD:11554173
G Ppp2r5a protein phosphatase 2, regulatory subunit B', alpha JBrowse link 13 110,033,550 110,077,946 RGD:11554173
G Serpina1 serpin family A member 1 JBrowse link 6 127,610,241 127,632,265 RGD:11554173
RGD:8554872
G Srfbp1 serum response factor binding protein 1 JBrowse link 18 47,456,406 47,478,967 RGD:8554872
G Timp1 TIMP metallopeptidase inhibitor 1 JBrowse link X 1,364,771 1,369,451 RGD:13207325
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:4143415
G Tp53 tumor protein p53 JBrowse link 10 56,186,299 56,198,449 RGD:11554173
alpha 1-antitrypsin deficiency term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Serpina1 serpin family A member 1 JBrowse link 6 127,610,241 127,632,265 RGD:7240710
RGD:8554872
RGD:11554173
pulmonary emphysema term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adipoq adiponectin, C1Q and collagen domain containing JBrowse link 11 81,330,845 81,344,488 RGD:5686887
G Alb albumin JBrowse link 14 19,176,275 19,191,793 RGD:11035274
G Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 JBrowse link 3 114,869,478 114,880,218 RGD:13592920
G Ccl11 C-C motif chemokine ligand 11 JBrowse link 10 69,434,965 69,439,566 RGD:4145393
G Ccl2 C-C motif chemokine ligand 2 JBrowse link 10 69,412,065 69,413,863 RGD:4891458
G Ccr5 C-C motif chemokine receptor 5 JBrowse link 8 133,192,398 133,215,599 RGD:4892098
RGD:4892090
RGD:4892104
G Chi3l1 chitinase 3 like 1 JBrowse link 13 51,022,844 51,030,797 RGD:4892658
G Csf3 colony stimulating factor 3 JBrowse link 10 86,616,785 86,619,160 RGD:11039438
G Cx3cl1 C-X3-C motif chemokine ligand 1 JBrowse link 19 10,644,267 10,654,861 RGD:4891888
G Cxcl1 C-X-C motif chemokine ligand 1 JBrowse link 14 18,743,678 18,745,457 RGD:5135245
G Cxcl10 C-X-C motif chemokine ligand 10 JBrowse link 14 17,210,733 17,212,930 RGD:4892104
G Cxcl3 chemokine (C-X-C motif) ligand 3 JBrowse link 14 18,820,168 18,839,659 RGD:5135245
G Cxcl6 C-X-C motif chemokine ligand 6 JBrowse link 14 18,860,201 18,920,839 RGD:5135245
G Cxcl9 C-X-C motif chemokine ligand 9 JBrowse link 14 17,228,832 17,233,743 RGD:4892104
G Cxcr3 C-X-C motif chemokine receptor 3 JBrowse link X 71,614,346 71,616,997 RGD:4892104
G Defb1 defensin beta 1 JBrowse link 16 75,294,385 75,309,127 RGD:4892249
G Ednra endothelin receptor type A JBrowse link 19 33,928,356 33,991,703 RGD:4892307
G Egr1 early growth response 1 JBrowse link 18 27,657,903 27,660,101 RGD:5131973
RGD:5131853
RGD:5131892
G Elane elastase, neutrophil expressed JBrowse link 7 12,638,320 12,640,168 RGD:10450557
G Eln elastin JBrowse link 12 24,978,478 25,021,864 RGD:11554173
G Ephx1 epoxide hydrolase 1 JBrowse link 13 99,271,390 99,300,580 RGD:4140935
RGD:11554173
RGD:4889405
RGD:1601065
RGD:4889406
G Fbn1 fibrillin 1 JBrowse link 3 117,569,708 117,766,160 RGD:13592920
G Fga fibrinogen alpha chain JBrowse link 2 181,997,562 182,013,726 RGD:11040553
G Fut8 fucosyltransferase 8 JBrowse link 6 100,305,957 100,537,208 RGD:13592920
G Gclc glutamate-cysteine ligase, catalytic subunit JBrowse link 8 85,059,051 85,097,471 RGD:5134681
G Gstm1 glutathione S-transferase mu 1 JBrowse link 2 210,803,869 210,809,461 RGD:4140927
G Gstm3 glutathione S-transferase mu 3 JBrowse link 2 210,685,204 210,688,273 RGD:5135041
G Gstp1 glutathione S-transferase pi 1 JBrowse link 1 219,291,679 219,294,147 RGD:4140935
G Hdac2 histone deacetylase 2 JBrowse link 20 43,084,870 43,108,198 RGD:9590245
RGD:9590320
G Hhip Hedgehog-interacting protein JBrowse link 19 31,525,134 31,614,487 RGD:11552596
G Hmox1 heme oxygenase 1 JBrowse link 19 14,508,634 14,515,455 RGD:1601606
RGD:11554173
G Il13 interleukin 13 JBrowse link 10 38,982,909 38,985,466 RGD:4145652
G Il17ra interleukin 17 receptor A JBrowse link 4 152,995,865 153,018,394 RGD:5144212
G Il18 interleukin 18 JBrowse link 8 55,009,666 55,016,286 RGD:4889590
RGD:8655969
G Itgb6 integrin subunit beta 6 JBrowse link 3 46,652,624 46,775,362 RGD:737734
RGD:11554173
G Jun Jun proto-oncogene, AP-1 transcription factor subunit JBrowse link 5 114,011,184 114,014,277 RGD:13592920
G Keap1 Kelch-like ECH-associated protein 1 JBrowse link 8 22,250,518 22,259,868 RGD:5134973
RGD:6893395
G Kl Klotho JBrowse link 12 942,974 987,206 RGD:13592920
G Lox lysyl oxidase JBrowse link 18 47,500,320 47,577,819 RGD:8554872
G Mmp1 matrix metallopeptidase 1 JBrowse link 8 5,703,206 5,723,593 RGD:4890375
G Mmp12 matrix metallopeptidase 12 JBrowse link 8 5,594,717 5,616,494 RGD:11554173
G Mmp2 matrix metallopeptidase 2 JBrowse link 19 15,542,771 15,570,589 RGD:4892307
RGD:11554173
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:4892307
RGD:11554173
RGD:8547887
RGD:5130151
G Mus81 MUS81 structure-specific endonuclease subunit JBrowse link 1 220,862,474 220,867,973 RGD:13592920
G Nfe2l2 nuclear factor, erythroid 2-like 2 JBrowse link 3 62,497,568 62,525,146 RGD:5134973
G Nfkbia NFKB inhibitor alpha JBrowse link 6 76,267,227 76,270,457 RGD:4891488
G Nos2 nitric oxide synthase 2 JBrowse link 10 66,188,290 66,221,621 RGD:4891488
RGD:5509103
RGD:4891415
G Nos3 nitric oxide synthase 3 JBrowse link 4 7,321,908 7,342,404 RGD:4891415
G Nqo1 NAD(P)H quinone dehydrogenase 1 JBrowse link 19 38,422,210 38,437,103 RGD:5134973
G Pgf placental growth factor JBrowse link 6 108,994,016 109,004,598 RGD:5135245
G Ppargc1a PPARG coactivator 1 alpha JBrowse link 14 63,095,291 63,190,688 RGD:7242020
G Ptgs2 prostaglandin-endoperoxide synthase 2 JBrowse link 13 67,351,230 67,356,920 RGD:4891488
G Serpina1 serpin family A member 1 JBrowse link 6 127,610,241 127,632,265 RGD:4892126
RGD:11554173
RGD:4892125
G Sftpc surfactant protein C JBrowse link 15 52,211,538 52,214,480 RGD:4144115
G Smo smoothened, frizzled class receptor JBrowse link 4 57,019,941 57,041,779 RGD:13592920
G Smpd3 sphingomyelin phosphodiesterase 3 JBrowse link 19 38,237,963 38,321,572 RGD:10041059
G Srfbp1 serum response factor binding protein 1 JBrowse link 18 47,456,406 47,478,967 RGD:8554872
G Tacr1 tachykinin receptor 1 JBrowse link 4 113,247,236 113,416,139 RGD:5147818
G Tgfb1 transforming growth factor, beta 1 JBrowse link 1 82,480,875 82,497,196 RGD:4145272
RGD:11554173
G Tlr2 toll-like receptor 2 JBrowse link 2 182,840,171 182,846,061 RGD:4145342
G Tlr4 toll-like receptor 4 JBrowse link 5 82,587,424 82,601,056 RGD:4144170
RGD:13592920
G Tnf tumor necrosis factor JBrowse link 20 5,189,382 5,192,000 RGD:11554173

Term paths to the root
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Term Annotations click to browse term
  disease 14759
    Pathological Conditions, Signs and Symptoms 7254
      Pathologic Processes 4755
        Emphysema 74
          Congenital Emphysema, with Deafness, Penoscrotal Web, and Mental Retardation 0
          Congenital Hemolytic Anemia with Emphysema and Cutis Laxa 0
          Mediastinal Emphysema 0
          Subcutaneous Emphysema + 1
          pulmonary emphysema + 62
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