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ONTOLOGY REPORT - ANNOTATIONS


Term:Cicatrix
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Accession:DOID:9004739 term browser browse the term
Definition:The fibrous tissue that replaces normal tissue during the process of WOUND HEALING.
Synonyms:exact_synonym: Cicatrization;   Scar;   Scarring;   Scars
 primary_id: MESH:D002921;   RDO:0004747
For additional species annotation, visit the Alliance of Genome Resources.


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Cicatrix term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Col7a1 collagen type VII alpha 1 chain JBrowse link 8 117,694,441 117,726,844 RGD:8554872
G Mfn2 mitofusin 2 JBrowse link 5 164,684,244 164,715,414 RGD:8554872
G Mmp9 matrix metallopeptidase 9 JBrowse link 3 161,413,410 161,421,473 RGD:13207326
G Smad4 SMAD family member 4 JBrowse link 18 69,626,682 69,657,373 RGD:12880045
Keloid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Actrt2 actin-related protein T2 JBrowse link 5 172,077,290 172,078,690 RGD:11554173
G Agpat5 1-acylglycerol-3-phosphate O-acyltransferase 5 JBrowse link 16 75,812,837 75,855,996 RGD:8554872
G Alb albumin JBrowse link 14 19,176,275 19,191,793 RGD:11554173
G Arhgdia Rho GDP dissociation inhibitor alpha JBrowse link 10 109,754,012 109,757,506 RGD:11554173
G Asah1 N-acylsphingosine amidohydrolase 1 JBrowse link 16 53,998,604 54,030,006 RGD:8554872
G Aspn asporin JBrowse link 17 14,655,958 14,681,355 RGD:11554173
G Capg capping actin protein, gelsolin like JBrowse link 4 100,395,693 100,419,447 RGD:11554173
G Clic1 chloride intracellular channel 1 JBrowse link 20 5,040,314 5,049,166 RGD:11554173
G Col1a1 collagen type I alpha 1 chain JBrowse link 10 82,745,801 82,762,790 RGD:11554173
G Col3a1 collagen type III alpha 1 chain JBrowse link 9 52,023,295 52,059,221 RGD:11554173
G Col5a1 collagen type V alpha 1 chain JBrowse link 3 6,430,180 6,581,010 RGD:11554173
G Crabp1 cellular retinoic acid binding protein 1 JBrowse link 8 59,344,097 59,352,135 RGD:11554173
G Eif5a eukaryotic translation initiation factor 5A JBrowse link 10 56,527,075 56,531,615 RGD:11554173
G Fgg fibrinogen gamma chain JBrowse link 2 181,987,080 181,994,523 RGD:11554173
G Foxl2 forkhead box L2 JBrowse link 8 107,194,492 107,197,644 RGD:11554173
G Fth1 ferritin heavy chain 1 JBrowse link 1 226,030,940 226,033,228 RGD:11554173
G Ftl1 ferritin light chain 1 JBrowse link 1 101,448,190 101,450,034 RGD:11554173
G Hbb-b1 hemoglobin, beta adult major chain JBrowse link 1 168,945,531 168,953,023 RGD:11554173
G Lgals1 galectin 1 JBrowse link 7 120,153,184 120,156,290 RGD:11554173
G Mif macrophage migration inhibitory factor JBrowse link 20 13,715,219 13,732,980 RGD:11554173
G Mydgf myeloid-derived growth factor JBrowse link 9 10,885,521 10,892,744 RGD:11554173
G Myl6b myosin light chain 6B JBrowse link X 43,831,778 43,833,044 RGD:11554173
G Nedd4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase JBrowse link 8 79,323,408 79,408,842 RGD:11554173
G Pfn1 profilin 1 JBrowse link 10 57,273,003 57,275,708 RGD:11554173
G Prdx1 peroxiredoxin 1 JBrowse link 5 135,536,413 135,551,986 RGD:11554173
G Prdx2 peroxiredoxin 2 JBrowse link 19 26,084,816 26,090,095 RGD:11554173
G Ran RAN, member RAS oncogene family JBrowse link 12 31,319,556 31,324,105 RGD:11554173
G S100a10 S100 calcium binding protein A10 JBrowse link 2 193,892,589 193,901,236 RGD:11554173
G S100a4 S100 calcium-binding protein A4 JBrowse link 2 189,997,278 189,999,587 RGD:11554173
G S100a8 S100 calcium binding protein A8 JBrowse link 2 190,073,239 190,074,333 RGD:11554173
G S100a9 S100 calcium binding protein A9 JBrowse link 2 190,097,436 190,100,209 RGD:11554173
G Serpinb5 serpin family B member 5 JBrowse link 13 26,903,052 26,923,250 RGD:11554173
G Serpinf1 serpin family F member 1 JBrowse link 10 62,241,750 62,254,145 RGD:11554173
G Sfn stratifin JBrowse link 5 151,823,422 151,824,937 RGD:11554173
G Tagln transgelin JBrowse link 8 50,222,895 50,228,369 RGD:11554173
G Tpm1 tropomyosin 1 JBrowse link 8 72,814,737 72,841,496 RGD:11554173
G Tpsb2 tryptase beta 2 JBrowse link 10 14,722,672 14,724,464 RGD:11554173
Peritoneal Adhesions term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sdha succinate dehydrogenase complex flavoprotein subunit A JBrowse link 1 31,545,631 31,570,601 RGD:13825244
G Serpine1 serpin family E member 1 JBrowse link 12 22,641,104 22,651,482 RGD:11073682
RGD:11073723
Tissue Adhesions term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl5 C-C motif chemokine ligand 5 JBrowse link 10 70,739,764 70,744,303 RGD:4890014
G Cyp19a1 cytochrome P450, family 19, subfamily a, polypeptide 1 JBrowse link 8 58,744,849 58,772,408 RGD:7257719
G Egr1 early growth response 1 JBrowse link 18 27,657,903 27,660,101 RGD:5131938

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 14759
    Pathological Conditions, Signs and Symptoms 7254
      Pathologic Processes 4755
        Fibrosis 1322
          Cicatrix 46
            Cicatrix, Hypertrophic 0
            Keloid + 37
            Tissue Adhesions + 5
paths to the root