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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Perinatal Death
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Accession:DOID:9008539 term browser browse the term
Definition:The death of a FETUS of GESTATIONAL AGE 28 weeks or more, or the death of a live-born INFANT less than 28 days of age.
Synonyms:exact_synonym: Neonatal Death;   Neonatal Deaths;   Perinatal Deaths
 primary_id: MESH:D066087;   RDO:0015988
For additional species annotation, visit the Alliance of Genome Resources.


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Perinatal Death term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAM20C FAM20C golgi associated secretory pathway kinase IAGP ClinVar Annotator: match by term: Neonatal death ClinVar PMID:25558065 NCBI chr 7:192,571...260,772
Ensembl chr 7:192,571...260,772
JBrowse link
G FANCD2 FA complementation group D2 ISO RGD PMID:12893777 RGD:11344906 NCBI chr 3:10,026,437...10,101,932
Ensembl chr 3:10,026,414...10,101,932
Ensembl chr 3:10,026,414...10,101,932
JBrowse link
G FBN2 fibrillin 2 IAGP ClinVar Annotator: match by term: Neonatal death ClinVar PMID:25558065 NCBI chr 5:128,257,909...128,538,245
Ensembl chr 5:128,257,909...128,659,185
JBrowse link
G KCNMA1 potassium calcium-activated channel subfamily M alpha 1 EXP CTD Direct Evidence: marker/mechanism CTD PMID:28242822 NCBI chr10:76,869,602...77,637,969
Ensembl chr10:76,869,601...77,638,369
JBrowse link
G LAMC3 laminin subunit gamma 3 IAGP ClinVar Annotator: match by term: Neonatal death ClinVar PMID:25741868 NCBI chr 9:131,009,174...131,094,473
Ensembl chr 9:131,009,174...131,094,473
JBrowse link
G MT-TV mitochondrially encoded tRNA-Val (GUN) IAGP ClinVar Annotator: match by term: Neonatal death ClinVar PMID:11799391, PMID:17886296, PMID:18400783, PMID:25652200, PMID:31965079 NCBI chr MT:1,602...1,670
Ensembl chr MT:1,602...1,670
JBrowse link
G POMGNT2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) IAGP ClinVar Annotator: match by term: Neonatal death ClinVar PMID:22958903, PMID:25558065 NCBI chr 3:43,079,229...43,106,085
Ensembl chr 3:43,079,232...43,106,079
JBrowse link
G SPDL1 spindle apparatus coiled-coil protein 1 IAGP ClinVar Annotator: match by term: Neonatal death ClinVar PMID:25558065 NCBI chr 5:169,583,661...169,604,778
Ensembl chr 5:169,583,636...169,604,778
JBrowse link
G WDR81 WD repeat domain 81 IAGP ClinVar Annotator: match by term: Neonatal death ClinVar PMID:25558065, PMID:25741868, PMID:28556411 NCBI chr17:1,716,523...1,738,585
Ensembl chr17:1,716,523...1,738,599
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 17777
    Pathological Conditions, Signs and Symptoms 9377
      Pathologic Processes 6607
        Death 144
          Perinatal Death 9
Path 2
Term Annotations click to browse term
  disease 17777
    disease of anatomical entity 16339
      Urogenital Diseases 4525
        Female Urogenital Diseases and Pregnancy Complications 2029
          Pregnancy Complications 591
            Perinatal Death 9
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.