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RGD DISEASE ONTOLOGY - ANNOTATIONS

RGD uses the Human Disease Ontology (DO, https://disease-ontology.org/) for disease curation across species. RGD automatically downloads each new release of the ontology on a monthly basis. Some additional terms which are required for RGD's curation purposes but are not currently covered in the official version of DO have been added. As corresponding terms are added to DO, these custom terms are retired and the DO terms substituted in existing annotations and subsequently used for curation.

Term:Perinatal Death
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Accession:DOID:9008539 term browser browse the term
Definition:The death of a FETUS of GESTATIONAL AGE 28 weeks or more, or the death of a live-born INFANT less than 28 days of age.
Synonyms:exact_synonym: Neonatal Death;   Neonatal Deaths;   Perinatal Deaths
 primary_id: MESH:D066087;   RDO:0015988
For additional species annotation, visit the Alliance of Genome Resources.


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Perinatal Death term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam20c family with sequence similarity 20, member C ISO ClinVar Annotator: match by term: Neonatal death ClinVar PMID:25558065 NCBI chr 5:138,755,081...138,810,063
Ensembl chr 5:138,754,514...138,810,077
JBrowse link
G Fancd2 Fanconi anemia, complementation group D2 IMP RGD PMID:12893777 RGD:11344906 NCBI chr 6:113,531,640...113,597,020
Ensembl chr 6:113,531,682...113,597,017
JBrowse link
G Fbn2 fibrillin 2 ISO ClinVar Annotator: match by term: Neonatal death ClinVar PMID:25558065 NCBI chr18:58,008,623...58,210,572
Ensembl chr18:58,008,623...58,210,487
JBrowse link
G Kcnma1 potassium large conductance calcium-activated channel, subfamily M, alpha member 1 ISO CTD Direct Evidence: marker/mechanism CTD PMID:28242822 NCBI chr14:23,292,288...24,005,110
Ensembl chr14:23,289,431...24,014,491
JBrowse link
G Lamc3 laminin gamma 3 ISO ClinVar Annotator: match by term: Neonatal death ClinVar PMID:25741868 NCBI chr 2:31,887,281...31,949,083
Ensembl chr 2:31,887,291...31,946,539
JBrowse link
G mt-Tv tRNA valine, mitochondrial ISO ClinVar Annotator: match by term: Neonatal death ClinVar PMID:11799391, PMID:17886296, PMID:18400783, PMID:25652200, PMID:31965079 NCBI chr MT:1,025...1,093
Ensembl chr MT:1,025...1,093
JBrowse link
G Pomgnt2 protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2 ISO ClinVar Annotator: match by term: Neonatal death ClinVar PMID:22958903, PMID:25558065 NCBI chr 9:121,981,606...121,996,053
Ensembl chr 9:121,981,606...121,997,110
JBrowse link
G Spdl1 spindle apparatus coiled-coil protein 1 ISO ClinVar Annotator: match by term: Neonatal death ClinVar PMID:25558065 NCBI chr11:34,809,185...34,833,665
Ensembl chr11:34,809,190...34,833,641
JBrowse link
G Wdr81 WD repeat domain 81 ISO ClinVar Annotator: match by term: Neonatal death ClinVar PMID:25558065, PMID:25741868, PMID:28556411 NCBI chr11:75,440,943...75,454,808
Ensembl chr11:75,440,944...75,454,717
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  disease 13345
    Pathological Conditions, Signs and Symptoms 7945
      Pathologic Processes 5893
        Death 138
          Perinatal Death 9
Path 2
Term Annotations click to browse term
  disease 13345
    disease of anatomical entity 12825
      Urogenital Diseases 3822
        Female Urogenital Diseases and Pregnancy Complications 1878
          Pregnancy Complications 569
            Perinatal Death 9
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.